Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21e06
         (427 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   2.9  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   5.0  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   6.6  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    20   8.7  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    20   8.7  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    20   8.7  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = +3

Query: 150 PPTFKPIKKYSDISGLPAPYMDRHSKLY 233
           PP  +P   ++ ++G   P  D H + Y
Sbjct: 177 PPQPEPPVTFNSLNGAHTPLTDDHDEKY 204


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +3

Query: 111 WPNEAVLYYSINAPPTFKPIKKYSDIS 191
           WP   VL Y++    +FK    Y D S
Sbjct: 21  WPISIVLIYTVGVVYSFKRRIFYQDES 47


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = +3

Query: 135 YSINAPPTFKPIKKYSDISGLPAPYMDRHSKLY 233
           Y    PP ++P  +YS +S   +   +  S  Y
Sbjct: 29  YPPRCPPIYEPSCQYSPVSNSDSENSEVSSNSY 61


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 173 KIFRHIRITSTIYG 214
           KIFR I+I + I+G
Sbjct: 5   KIFRPIKILAEIFG 18


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 173 KIFRHIRITSTIYG 214
           KIFR I+I + I+G
Sbjct: 5   KIFRPIKILAEIFG 18


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 207 YMDRHSKLYFSNAEEFATVRNLP 275
           Y   H++ YF   E+F   R LP
Sbjct: 90  YGMHHNEKYFPEPEKFDPNRYLP 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,369
Number of Sequences: 336
Number of extensions: 2166
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9490410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)