Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21e06
         (427 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069409-1|AAL39554.1|  110|Drosophila melanogaster LD10749p pro...    99   2e-21
AE014298-1212|AAF46396.2|  110|Drosophila melanogaster CG12659-P...    99   2e-21
AY052146-1|AAK93570.1| 1728|Drosophila melanogaster SD10541p pro...    30   1.1  
AF093637-1|AAC72365.1| 1750|Drosophila melanogaster SET domain b...    30   1.1  
AE014297-1382|AAF54700.3| 1993|Drosophila melanogaster CG6939-PA...    30   1.1  
AE014297-1381|AAN13531.2| 1973|Drosophila melanogaster CG6939-PB...    30   1.1  
BT011018-1|AAR30178.1|  520|Drosophila melanogaster RE58902p pro...    27   7.9  

>AY069409-1|AAL39554.1|  110|Drosophila melanogaster LD10749p
           protein.
          Length = 110

 Score = 99.1 bits (236), Expect = 2e-21
 Identities = 44/92 (47%), Positives = 65/92 (70%)
 Frame = +3

Query: 54  KKRMWRSLKQILTADRALPWPNEAVLYYSINAPPTFKPIKKYSDISGLPAPYMDRHSKLY 233
           K  ++R L+QI   +R+     E   Y+++NAPP+  P KKYSDISGLPAPY D H+KL 
Sbjct: 19  KNCVYRPLRQISNMERSQKLSAEQPTYFTLNAPPSLVPAKKYSDISGLPAPYADPHTKLR 78

Query: 234 FSNAEEFATVRNLPMDITAGYLQLRGANTIVG 329
           F++A+E+A+++++P DI  GYL +RG  + VG
Sbjct: 79  FASADEYASMQHMPSDIVNGYLMVRGYTSAVG 110


>AE014298-1212|AAF46396.2|  110|Drosophila melanogaster CG12659-PB
           protein.
          Length = 110

 Score = 99.1 bits (236), Expect = 2e-21
 Identities = 44/92 (47%), Positives = 65/92 (70%)
 Frame = +3

Query: 54  KKRMWRSLKQILTADRALPWPNEAVLYYSINAPPTFKPIKKYSDISGLPAPYMDRHSKLY 233
           K  ++R L+QI   +R+     E   Y+++NAPP+  P KKYSDISGLPAPY D H+KL 
Sbjct: 19  KNCVYRPLRQISNMERSQKLSAEQPTYFTLNAPPSLVPAKKYSDISGLPAPYADPHTKLR 78

Query: 234 FSNAEEFATVRNLPMDITAGYLQLRGANTIVG 329
           F++A+E+A+++++P DI  GYL +RG  + VG
Sbjct: 79  FASADEYASMQHMPSDIVNGYLMVRGYTSAVG 110


>AY052146-1|AAK93570.1| 1728|Drosophila melanogaster SD10541p
           protein.
          Length = 1728

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 334 SYPTIVFAPLSCKYPAVMSIGR 269
           SYP I+ AP+ C   A+M +GR
Sbjct: 928 SYPAIIVAPVQCSDAAIMHLGR 949


>AF093637-1|AAC72365.1| 1750|Drosophila melanogaster SET domain
            binding factor protein.
          Length = 1750

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 334  SYPTIVFAPLSCKYPAVMSIGR 269
            SYP I+ AP+ C   A+M +GR
Sbjct: 949  SYPAIIVAPVQCSDAAIMHLGR 970


>AE014297-1382|AAF54700.3| 1993|Drosophila melanogaster CG6939-PA,
            isoform A protein.
          Length = 1993

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 334  SYPTIVFAPLSCKYPAVMSIGR 269
            SYP I+ AP+ C   A+M +GR
Sbjct: 1193 SYPAIIVAPVQCSDAAIMHLGR 1214


>AE014297-1381|AAN13531.2| 1973|Drosophila melanogaster CG6939-PB,
            isoform B protein.
          Length = 1973

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 334  SYPTIVFAPLSCKYPAVMSIGR 269
            SYP I+ AP+ C   A+M +GR
Sbjct: 1173 SYPAIIVAPVQCSDAAIMHLGR 1194


>BT011018-1|AAR30178.1|  520|Drosophila melanogaster RE58902p
           protein.
          Length = 520

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = +3

Query: 24  ENKFIVKSGSKKRMWRSLKQILTADRALPWPNE-AVLYYSINAPPTFKPIKKYSDISGLP 200
           +N F V     KRM + LK++L   +A P  NE A+   S   PP      + ++   L 
Sbjct: 246 QNSFGVPIEQDKRMLQLLKELLHKPQATPAGNEPALTRVSPTLPPPLSASGRPTEAMALT 305

Query: 201 AP 206
            P
Sbjct: 306 TP 307


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,646,112
Number of Sequences: 53049
Number of extensions: 357373
Number of successful extensions: 734
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1313584398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)