Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc21e06
(427 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74042-4|CAA98533.1| 265|Caenorhabditis elegans Hypothetical pr... 31 0.46
AF024501-11|AAB70366.2| 443|Caenorhabditis elegans Hypothetical... 28 2.4
Z66494-4|CAA91263.1| 599|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical pr... 27 5.6
Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical pr... 27 5.6
Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical pr... 26 9.8
Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical pr... 26 9.8
Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical pr... 26 9.8
Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical pr... 26 9.8
Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical pr... 26 9.8
Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical pr... 26 9.8
U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonin... 26 9.8
U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonin... 26 9.8
>Z74042-4|CAA98533.1| 265|Caenorhabditis elegans Hypothetical
protein T11F9.5 protein.
Length = 265
Score = 30.7 bits (66), Expect = 0.46
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +3
Query: 6 YYCFXRENKFIVKSGSK---KRMWRSLKQILTADRALPWPNEAVLYY 137
Y+ F NK +++ G KR+ RS +Q L D WP + Y+
Sbjct: 18 YFRFSNGNKIVMRVGGSPETKRLERSKRQALRMDNEPRWPRGTINYF 64
>AF024501-11|AAB70366.2| 443|Caenorhabditis elegans Hypothetical
protein F39E9.1 protein.
Length = 443
Score = 28.3 bits (60), Expect = 2.4
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Frame = +3
Query: 57 KRMWRSLKQILTADRALP-WPNEAVLYYSI-NAPPTFKPIKKYSDISGLPAPYMDRHSKL 230
K+ W + +IL D P W A+ Y S+ N P +K P P ++ +KL
Sbjct: 92 KKSW--ITKILGIDFLGPKWFKTAIFYISLSNCDPQIIRLKNIPS----PIPNVEEGAKL 145
Query: 231 YFSNAEEFATVRNLPMDITAGYLQLRGAN 317
Y ++ ++ ++N+ + G L N
Sbjct: 146 YLASNDDNGLLKNIQVQTAGGSFTLDQLN 174
>Z66494-4|CAA91263.1| 599|Caenorhabditis elegans Hypothetical
protein C34C6.4 protein.
Length = 599
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +3
Query: 111 WPNEAVLYYSI-NAPPTFKPIKKYSDISGLPAPYMDRHSKLYFSNAE 248
W E ++ N P FK + YSD +G PY + LY +
Sbjct: 142 WEKEGASGWNYANCLPYFKKAETYSDATGPNDPYRGNNGPLYVKKGD 188
>Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical
protein F58H1.1b protein.
Length = 1145
Score = 27.1 bits (57), Expect = 5.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 133 IIQ*MLRQHSNLLKNIQTYQDYQHHIWIDTQN 228
++Q + +N LK +QTY YQ WID N
Sbjct: 839 VVQKVFATPNNDLKILQTYTLYQGLPWIDLDN 870
>Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical
protein F58H1.1a protein.
Length = 1143
Score = 27.1 bits (57), Expect = 5.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 133 IIQ*MLRQHSNLLKNIQTYQDYQHHIWIDTQN 228
++Q + +N LK +QTY YQ WID N
Sbjct: 837 VVQKVFATPNNDLKILQTYTLYQGLPWIDLDN 868
>Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical
protein H39E23.1c protein.
Length = 1062
Score = 26.2 bits (55), Expect = 9.8
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 99 RALPWPNEAVLYYSINAPPTFKPIKKYSDISGLPAPYMDRHSKLYFSNAE 248
RA P +A + S+ PP++KP + I+ +P P +R+S S A+
Sbjct: 480 RAQPTSRQATI--SLLQPPSYKPSSNTTQIAQIP-PLFNRNSTATSSAAQ 526
>Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 26.2 bits (55), Expect = 9.8
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 99 RALPWPNEAVLYYSINAPPTFKPIKKYSDISGLPAPYMDRHSKLYFSNAE 248
RA P +A + S+ PP++KP + I+ +P P +R+S S A+
Sbjct: 514 RAQPTSRQATI--SLLQPPSYKPSSNTTQIAQIP-PLFNRNSTATSSAAQ 560
>Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 26.2 bits (55), Expect = 9.8
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 99 RALPWPNEAVLYYSINAPPTFKPIKKYSDISGLPAPYMDRHSKLYFSNAE 248
RA P +A + S+ PP++KP + I+ +P P +R+S S A+
Sbjct: 610 RAQPTSRQATI--SLLQPPSYKPSSNTTQIAQIP-PLFNRNSTATSSAAQ 656
>Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical
protein H39E23.1c protein.
Length = 1062
Score = 26.2 bits (55), Expect = 9.8
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 99 RALPWPNEAVLYYSINAPPTFKPIKKYSDISGLPAPYMDRHSKLYFSNAE 248
RA P +A + S+ PP++KP + I+ +P P +R+S S A+
Sbjct: 480 RAQPTSRQATI--SLLQPPSYKPSSNTTQIAQIP-PLFNRNSTATSSAAQ 526
>Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 26.2 bits (55), Expect = 9.8
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 99 RALPWPNEAVLYYSINAPPTFKPIKKYSDISGLPAPYMDRHSKLYFSNAE 248
RA P +A + S+ PP++KP + I+ +P P +R+S S A+
Sbjct: 514 RAQPTSRQATI--SLLQPPSYKPSSNTTQIAQIP-PLFNRNSTATSSAAQ 560
>Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 26.2 bits (55), Expect = 9.8
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 99 RALPWPNEAVLYYSINAPPTFKPIKKYSDISGLPAPYMDRHSKLYFSNAE 248
RA P +A + S+ PP++KP + I+ +P P +R+S S A+
Sbjct: 610 RAQPTSRQATI--SLLQPPSYKPSSNTTQIAQIP-PLFNRNSTATSSAAQ 656
>U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1096
Score = 26.2 bits (55), Expect = 9.8
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 99 RALPWPNEAVLYYSINAPPTFKPIKKYSDISGLPAPYMDRHSKLYFSNAE 248
RA P +A + S+ PP++KP + I+ +P P +R+S S A+
Sbjct: 514 RAQPTSRQATI--SLLQPPSYKPSSNTTQIAQIP-PLFNRNSTATSSAAQ 560
>U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1192
Score = 26.2 bits (55), Expect = 9.8
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 99 RALPWPNEAVLYYSINAPPTFKPIKKYSDISGLPAPYMDRHSKLYFSNAE 248
RA P +A + S+ PP++KP + I+ +P P +R+S S A+
Sbjct: 610 RAQPTSRQATI--SLLQPPSYKPSSNTTQIAQIP-PLFNRNSTATSSAAQ 656
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,367,766
Number of Sequences: 27780
Number of extensions: 191986
Number of successful extensions: 417
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 417
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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