Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc21e05
(477 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein. 174 2e-43
BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13 p... 174 2e-43
BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein. 174 2e-43
BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13 p... 174 2e-43
BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13 p... 174 2e-43
BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein. 174 2e-43
BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13 p... 174 2e-43
BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13 p... 174 2e-43
BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13 p... 174 2e-43
BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13 p... 174 2e-43
BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13 p... 174 2e-43
BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13 p... 174 2e-43
BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein. 174 2e-43
AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13 p... 174 2e-43
BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13 p... 171 1e-42
>X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein.
Length = 211
Score = 174 bits (423), Expect = 2e-43
Identities = 80/124 (64%), Positives = 94/124 (75%)
Frame = +1
Query: 79 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 258
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 259 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 438
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQTNVQRLKEYRSKLI 125
Query: 439 LFPK 450
LFP+
Sbjct: 126 LFPR 129
>BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 174 bits (423), Expect = 2e-43
Identities = 80/124 (64%), Positives = 94/124 (75%)
Frame = +1
Query: 79 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 258
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 259 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 438
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 439 LFPK 450
LFP+
Sbjct: 126 LFPR 129
>BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 174 bits (423), Expect = 2e-43
Identities = 80/124 (64%), Positives = 94/124 (75%)
Frame = +1
Query: 79 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 258
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 259 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 438
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQTNVQRLKEYRSKLI 125
Query: 439 LFPK 450
LFP+
Sbjct: 126 LFPR 129
>BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 174 bits (423), Expect = 2e-43
Identities = 80/124 (64%), Positives = 94/124 (75%)
Frame = +1
Query: 79 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 258
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 259 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 438
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 439 LFPK 450
LFP+
Sbjct: 126 LFPR 129
>BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 174 bits (423), Expect = 2e-43
Identities = 80/124 (64%), Positives = 94/124 (75%)
Frame = +1
Query: 79 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 258
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 259 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 438
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 439 LFPK 450
LFP+
Sbjct: 126 LFPR 129
>BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 174 bits (423), Expect = 2e-43
Identities = 80/124 (64%), Positives = 94/124 (75%)
Frame = +1
Query: 79 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 258
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 259 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 438
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 439 LFPK 450
LFP+
Sbjct: 126 LFPR 129
>BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 174 bits (423), Expect = 2e-43
Identities = 80/124 (64%), Positives = 94/124 (75%)
Frame = +1
Query: 79 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 258
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 259 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 438
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 439 LFPK 450
LFP+
Sbjct: 126 LFPR 129
>BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 174 bits (423), Expect = 2e-43
Identities = 80/124 (64%), Positives = 94/124 (75%)
Frame = +1
Query: 79 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 258
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 259 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 438
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 439 LFPK 450
LFP+
Sbjct: 126 LFPR 129
>BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 174 bits (423), Expect = 2e-43
Identities = 80/124 (64%), Positives = 94/124 (75%)
Frame = +1
Query: 79 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 258
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 259 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 438
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 439 LFPK 450
LFP+
Sbjct: 126 LFPR 129
>BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 174 bits (423), Expect = 2e-43
Identities = 80/124 (64%), Positives = 94/124 (75%)
Frame = +1
Query: 79 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 258
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 259 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 438
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 439 LFPK 450
LFP+
Sbjct: 126 LFPR 129
>BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 174 bits (423), Expect = 2e-43
Identities = 80/124 (64%), Positives = 94/124 (75%)
Frame = +1
Query: 79 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 258
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 259 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 438
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 439 LFPK 450
LFP+
Sbjct: 126 LFPR 129
>BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 174 bits (423), Expect = 2e-43
Identities = 80/124 (64%), Positives = 94/124 (75%)
Frame = +1
Query: 79 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 258
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 259 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 438
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 439 LFPK 450
LFP+
Sbjct: 126 LFPR 129
>BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 174 bits (423), Expect = 2e-43
Identities = 80/124 (64%), Positives = 94/124 (75%)
Frame = +1
Query: 79 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 258
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 259 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 438
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 439 LFPK 450
LFP+
Sbjct: 126 LFPR 129
>AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 174 bits (423), Expect = 2e-43
Identities = 80/124 (64%), Positives = 94/124 (75%)
Frame = +1
Query: 79 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 258
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 259 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 438
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 439 LFPK 450
LFP+
Sbjct: 126 LFPR 129
>BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 171 bits (415), Expect = 1e-42
Identities = 79/124 (63%), Positives = 93/124 (75%)
Frame = +1
Query: 79 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 258
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRC TVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCTTVR 65
Query: 259 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 438
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 439 LFPK 450
LFP+
Sbjct: 126 LFPR 129
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,232,281
Number of Sequences: 237096
Number of extensions: 1455459
Number of successful extensions: 2774
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2759
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4213781852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -