Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21e04
         (580 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070530-1|AAL48001.1|  347|Drosophila melanogaster GM13767p pro...    29   4.5  
AE014134-53|AAF51536.1|  347|Drosophila melanogaster CG3436-PA, ...    29   4.5  
AY094806-1|AAM11159.1|  325|Drosophila melanogaster LD27256p pro...    29   6.0  
AE013599-746|AAF59020.1|  325|Drosophila melanogaster CG8237-PA ...    29   6.0  

>AY070530-1|AAL48001.1|  347|Drosophila melanogaster GM13767p
           protein.
          Length = 347

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
 Frame = +1

Query: 46  SICF--VGYLVYAGHLNNELQEIKSILVVMYESMEKHFSNVVDEID--SLKTDTFMMLSN 213
           ++CF   G  V +G ++NE++    I  +  +++  H     D I   SL  +   +L+N
Sbjct: 187 AVCFGDTGEQVISGGIDNEVK----IWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTN 242

Query: 214 LQNNTIRTWD 243
             +NT+R WD
Sbjct: 243 AMDNTLRVWD 252


>AE014134-53|AAF51536.1|  347|Drosophila melanogaster CG3436-PA,
           isoform A protein.
          Length = 347

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
 Frame = +1

Query: 46  SICF--VGYLVYAGHLNNELQEIKSILVVMYESMEKHFSNVVDEID--SLKTDTFMMLSN 213
           ++CF   G  V +G ++NE++    I  +  +++  H     D I   SL  +   +L+N
Sbjct: 187 AVCFGDTGEQVISGGIDNEVK----IWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTN 242

Query: 214 LQNNTIRTWD 243
             +NT+R WD
Sbjct: 243 AMDNTLRVWD 252


>AY094806-1|AAM11159.1|  325|Drosophila melanogaster LD27256p
           protein.
          Length = 325

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 17/61 (27%), Positives = 34/61 (55%)
 Frame = -3

Query: 275 LDIFLPFFTTASHVRIVLFCKLLNIINVSVLRESISSTTLEKCFSIDSYMTTSIDFISCS 96
           +D+F+ F      V+I++   ++N+ N+    E +   TL++     ++  TS+DFIS S
Sbjct: 133 IDMFILFI-----VKIIITFGVVNLFNIE-FDEDVIRRTLDQEDLFSNFFDTSLDFISMS 186

Query: 95  S 93
           +
Sbjct: 187 T 187


>AE013599-746|AAF59020.1|  325|Drosophila melanogaster CG8237-PA
           protein.
          Length = 325

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 17/61 (27%), Positives = 34/61 (55%)
 Frame = -3

Query: 275 LDIFLPFFTTASHVRIVLFCKLLNIINVSVLRESISSTTLEKCFSIDSYMTTSIDFISCS 96
           +D+F+ F      V+I++   ++N+ N+    E +   TL++     ++  TS+DFIS S
Sbjct: 133 IDMFILFI-----VKIIITFGVVNLFNIE-FDEDVIRRTLDQEDLFSNFFDTSLDFISMS 186

Query: 95  S 93
           +
Sbjct: 187 T 187


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,310,164
Number of Sequences: 53049
Number of extensions: 448365
Number of successful extensions: 1075
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)