Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21d19
         (524 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456961-1|CAG33242.1|  286|Homo sapiens SSR1 protein.                 64   2e-10
BT007387-1|AAP36051.1|  286|Homo sapiens signal sequence recepto...    64   2e-10
BC007710-1|AAH07710.1|  286|Homo sapiens signal sequence recepto...    64   2e-10
AK222809-1|BAD96529.1|  286|Homo sapiens signal sequence recepto...    64   2e-10
AK222762-1|BAD96482.1|  286|Homo sapiens signal sequence recepto...    64   2e-10
AF156965-1|AAD48778.1|  286|Homo sapiens translocon-associated p...    64   2e-10
AK075562-1|BAC11701.1|  259|Homo sapiens protein ( Homo sapiens ...    64   3e-10
AL139095-1|CAI16444.1|  286|Homo sapiens signal sequence recepto...    64   4e-10
Z12830-1|CAA78290.1|  286|Homo sapiens SSR alpha subunit protein.      62   9e-10

>CR456961-1|CAG33242.1|  286|Homo sapiens SSR1 protein.
          Length = 286

 Score = 64.5 bits (150), Expect = 2e-10
 Identities = 35/78 (44%), Positives = 47/78 (60%)
 Frame = +1

Query: 271 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVX 450
           +D   +D     ++S   DTTILF K     G+   D  A   V+F VGF NKG+ D++ 
Sbjct: 66  EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117

Query: 451 ESMEASFRYPMDYTYYIQ 504
           ES++ASFRYP DY +YIQ
Sbjct: 118 ESLDASFRYPQDYQFYIQ 135


>BT007387-1|AAP36051.1|  286|Homo sapiens signal sequence receptor,
           alpha (translocon-associated protein alpha) protein.
          Length = 286

 Score = 64.5 bits (150), Expect = 2e-10
 Identities = 35/78 (44%), Positives = 47/78 (60%)
 Frame = +1

Query: 271 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVX 450
           +D   +D     ++S   DTTILF K     G+   D  A   V+F VGF NKG+ D++ 
Sbjct: 66  EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117

Query: 451 ESMEASFRYPMDYTYYIQ 504
           ES++ASFRYP DY +YIQ
Sbjct: 118 ESLDASFRYPQDYQFYIQ 135


>BC007710-1|AAH07710.1|  286|Homo sapiens signal sequence receptor,
           alpha (translocon-associated protein alpha) protein.
          Length = 286

 Score = 64.5 bits (150), Expect = 2e-10
 Identities = 35/78 (44%), Positives = 47/78 (60%)
 Frame = +1

Query: 271 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVX 450
           +D   +D     ++S   DTTILF K     G+   D  A   V+F VGF NKG+ D++ 
Sbjct: 66  EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117

Query: 451 ESMEASFRYPMDYTYYIQ 504
           ES++ASFRYP DY +YIQ
Sbjct: 118 ESLDASFRYPQDYQFYIQ 135


>AK222809-1|BAD96529.1|  286|Homo sapiens signal sequence receptor,
           alpha variant protein.
          Length = 286

 Score = 64.5 bits (150), Expect = 2e-10
 Identities = 35/78 (44%), Positives = 47/78 (60%)
 Frame = +1

Query: 271 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVX 450
           +D   +D     ++S   DTTILF K     G+   D  A   V+F VGF NKG+ D++ 
Sbjct: 66  EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117

Query: 451 ESMEASFRYPMDYTYYIQ 504
           ES++ASFRYP DY +YIQ
Sbjct: 118 ESLDASFRYPQDYQFYIQ 135


>AK222762-1|BAD96482.1|  286|Homo sapiens signal sequence receptor,
           alpha variant protein.
          Length = 286

 Score = 64.5 bits (150), Expect = 2e-10
 Identities = 35/78 (44%), Positives = 47/78 (60%)
 Frame = +1

Query: 271 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVX 450
           +D   +D     ++S   DTTILF K     G+   D  A   V+F VGF NKG+ D++ 
Sbjct: 66  EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117

Query: 451 ESMEASFRYPMDYTYYIQ 504
           ES++ASFRYP DY +YIQ
Sbjct: 118 ESLDASFRYPQDYQFYIQ 135


>AF156965-1|AAD48778.1|  286|Homo sapiens translocon-associated
           protein alpha subunit protein.
          Length = 286

 Score = 64.5 bits (150), Expect = 2e-10
 Identities = 35/78 (44%), Positives = 47/78 (60%)
 Frame = +1

Query: 271 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVX 450
           +D   +D     ++S   DTTILF K     G+   D  A   V+F VGF NKG+ D++ 
Sbjct: 66  EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117

Query: 451 ESMEASFRYPMDYTYYIQ 504
           ES++ASFRYP DY +YIQ
Sbjct: 118 ESLDASFRYPQDYQFYIQ 135


>AK075562-1|BAC11701.1|  259|Homo sapiens protein ( Homo sapiens
           cDNA PSEC0262 fis, clone NT2RP3004505, highly similar to
           TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT PRECURSOR.
           ).
          Length = 259

 Score = 64.1 bits (149), Expect = 3e-10
 Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
 Frame = +1

Query: 280 LVDDDESVVKSS-QDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVXES 456
           L +D+E+V  S  +D D      +  P+  DL  D  A   V+F VGF NKG+ D++ ES
Sbjct: 35  LTEDEETVEDSIIEDEDDEAEVEEDEPT--DLVEDFPANNIVKFLVGFTNKGTEDFIVES 92

Query: 457 MEASFRYPMDYTYYIQ 504
           ++ASFRYP DY +YIQ
Sbjct: 93  LDASFRYPQDYQFYIQ 108


>AL139095-1|CAI16444.1|  286|Homo sapiens signal sequence receptor,
           alpha (translocon-associated protein alpha) protein.
          Length = 286

 Score = 63.7 bits (148), Expect = 4e-10
 Identities = 34/73 (46%), Positives = 45/73 (61%)
 Frame = +1

Query: 286 DDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVXESMEA 465
           +D     ++S   DTTILF K     G+   D  A   V+F VGF NKG+ D++ ES++A
Sbjct: 71  EDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIVESLDA 122

Query: 466 SFRYPMDYTYYIQ 504
           SFRYP DY +YIQ
Sbjct: 123 SFRYPQDYQFYIQ 135


>Z12830-1|CAA78290.1|  286|Homo sapiens SSR alpha subunit protein.
          Length = 286

 Score = 62.5 bits (145), Expect = 9e-10
 Identities = 34/78 (43%), Positives = 47/78 (60%)
 Frame = +1

Query: 271 DDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVDYVX 450
           +D   +D     ++S   DTTILF K     G+   D  A   V+F VGF NKG+ D++ 
Sbjct: 66  EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIV 117

Query: 451 ESMEASFRYPMDYTYYIQ 504
           ES++ASFRYP D+ +YIQ
Sbjct: 118 ESLDASFRYPQDHQFYIQ 135


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,628,255
Number of Sequences: 237096
Number of extensions: 1168405
Number of successful extensions: 1892
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1885
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)