Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21d19
         (524 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069541-1|AAL39686.1|  302|Drosophila melanogaster LD26546p pro...    88   6e-18
AE014298-1340|AAF46502.1|  302|Drosophila melanogaster CG32701-P...    88   6e-18

>AY069541-1|AAL39686.1|  302|Drosophila melanogaster LD26546p
           protein.
          Length = 302

 Score = 88.2 bits (209), Expect = 6e-18
 Identities = 43/88 (48%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
 Frame = +1

Query: 262 VVGDDALVDDDESVVKSSQ-DIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSV 438
           V G+DA  D+D     SS  + DT +LFTKP+ + G    D+  G PVEF +GF NKG+ 
Sbjct: 47  VTGEDAEADEDSDTGSSSSPNADTYLLFTKPLYTPGQ-QLDLPGGKPVEFLIGFTNKGAE 105

Query: 439 DYVXESMEASFRYPMDYTYYIQXLHRVA 522
           ++V E++EASFRYPMD+ Y+IQ    VA
Sbjct: 106 EFVIETVEASFRYPMDFNYFIQNFSAVA 133


>AE014298-1340|AAF46502.1|  302|Drosophila melanogaster CG32701-PA
           protein.
          Length = 302

 Score = 88.2 bits (209), Expect = 6e-18
 Identities = 43/88 (48%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
 Frame = +1

Query: 262 VVGDDALVDDDESVVKSSQ-DIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSV 438
           V G+DA  D+D     SS  + DT +LFTKP+ + G    D+  G PVEF +GF NKG+ 
Sbjct: 47  VTGEDAEADEDSDTGSSSSPNADTYLLFTKPLYTPGQ-QLDLPGGKPVEFLIGFTNKGAE 105

Query: 439 DYVXESMEASFRYPMDYTYYIQXLHRVA 522
           ++V E++EASFRYPMD+ Y+IQ    VA
Sbjct: 106 EFVIETVEASFRYPMDFNYFIQNFSAVA 133


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,879,127
Number of Sequences: 53049
Number of extensions: 365495
Number of successful extensions: 1009
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1007
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1949978112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)