Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21d14
         (702 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   6.5  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    22   6.5  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   6.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   6.5  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   8.6  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -3

Query: 334 KKFKLKCTYRFYTFLHDP*NTSYLVLHYVFMDIKTRNILKTMAE 203
           K+  LKC  +  +FL      + L+L      +KTR I +   E
Sbjct: 661 KQVILKCNIQDMSFLFSQLYNALLILISTVYAVKTRKIPENFNE 704


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -2

Query: 95  GFLCQCVACYCLKS*LYIDSFFGTCLKIRD 6
           G     +    L S +++ SFFG C  IR+
Sbjct: 47  GLAFPSITLIVLGSIIFVISFFGCCGAIRE 76


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 536 TNRNGTFKFNILFIWI 489
           TN N T K+   +IW+
Sbjct: 137 TNNNNTNKYKDYYIWV 152


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -3

Query: 334 KKFKLKCTYRFYTFLHDP*NTSYLVLHYVFMDIKTRNILKTMAE 203
           K+  LKC  +  +FL      + L+L      +KTR I +   E
Sbjct: 751 KQVILKCNIQDMSFLFSQLYNALLILISTVYAVKTRKIPENFNE 794


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 428 VDLNTYATFFYNSILKQLN 484
           +DLN   + FY +++  LN
Sbjct: 147 LDLNKVVSVFYTAVIPMLN 165


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,279
Number of Sequences: 438
Number of extensions: 3623
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)