Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc21d12
(586 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P21288 Cluster: Late expression factor 11; n=6; Nucleop... 241 1e-62
UniRef50_Q65330 Cluster: ORF 6; n=1; Autographa californica nucl... 207 2e-52
UniRef50_P21290 Cluster: Uncharacterized 25.3 kDa protein in 39K... 155 5e-37
UniRef50_Q7TLW3 Cluster: Late expression factor 11; n=1; Chorist... 112 7e-24
UniRef50_Q91GM8 Cluster: Late expression factor 11; n=5; Nucleop... 112 7e-24
UniRef50_A0EYS9 Cluster: Bv-e31; n=4; Nucleopolyhedrovirus|Rep: ... 86 7e-16
UniRef50_Q8V5V6 Cluster: ORF33; n=3; Nucleopolyhedrovirus|Rep: O... 75 2e-12
UniRef50_Q77LY7 Cluster: Lef-11; n=3; Nucleopolyhedrovirus|Rep: ... 68 1e-10
UniRef50_Q0IL81 Cluster: ORF38; n=2; Nucleopolyhedrovirus|Rep: O... 66 8e-10
UniRef50_Q7T9V6 Cluster: ORF_59; n=9; Granulovirus|Rep: ORF_59 -... 64 2e-09
UniRef50_Q9YMS9 Cluster: Late expression factor 11; n=1; Lymantr... 64 2e-09
UniRef50_Q80LT4 Cluster: Late expression factor 11; n=1; Adoxoph... 64 2e-09
UniRef50_Q8QL85 Cluster: Late expression factor 11; n=6; Nucleop... 60 3e-08
UniRef50_Q9J818 Cluster: Late expression factor 11; n=1; Spodopt... 60 5e-08
UniRef50_Q91BI6 Cluster: Late expression factor 11; n=1; Spodopt... 56 5e-07
UniRef50_A1YJB0 Cluster: Late expression factor 11; n=1; Spodopt... 56 6e-07
UniRef50_Q0IL82 Cluster: Lef-11; n=2; Leucania separata nuclear ... 52 1e-05
UniRef50_A0EYS8 Cluster: Late expression factor 11; n=1; Ecotrop... 51 2e-05
UniRef50_Q6QXJ5 Cluster: ORF52; n=3; Granulovirus|Rep: ORF52 - A... 50 4e-05
UniRef50_Q91EZ7 Cluster: ORF58 LEF-11; n=4; Granulovirus|Rep: OR... 48 1e-04
UniRef50_A5IZQ1 Cluster: Lef-11; n=1; Spodoptera litura granulov... 46 7e-04
UniRef50_Q6KC24 Cluster: Late expression factor 11; n=1; Orgyia ... 42 0.014
UniRef50_O63897 Cluster: RNA-dependent RNA polymerase; n=1; Bryo... 38 0.13
UniRef50_Q9DVY6 Cluster: PxORF46 peptide; n=1; Plutella xylostel... 38 0.23
UniRef50_Q5CWM7 Cluster: Large protein with ARM repeats; n=4; Cr... 36 0.93
UniRef50_Q9PVE8 Cluster: Cytochrome P450 3A30; n=4; Percomorpha|... 35 1.6
UniRef50_A7JHR1 Cluster: DNA primase; n=12; Francisella tularens... 34 2.2
UniRef50_A5Z483 Cluster: Putative uncharacterized protein; n=1; ... 34 2.8
UniRef50_P24933 Cluster: Late 100 kDa protein; n=12; Mastadenovi... 33 3.8
UniRef50_A1VH78 Cluster: Diguanylate cyclase; n=2; Desulfovibrio... 33 5.0
UniRef50_A6DDS4 Cluster: Putative uncharacterized protein; n=1; ... 33 6.6
UniRef50_A5VJ12 Cluster: Negative regulator of genetic competenc... 33 6.6
UniRef50_Q0YIG7 Cluster: Putative uncharacterized protein precur... 32 8.7
UniRef50_A6ATZ2 Cluster: Putative uncharacterized protein; n=2; ... 32 8.7
UniRef50_Q98SB8 Cluster: Putative uncharacterized protein orf224... 32 8.7
UniRef50_Q4MZN7 Cluster: Clathrin heavy chain, putative; n=1; Th... 32 8.7
UniRef50_Q6H501 Cluster: Probable cation transporter HKT6; n=4; ... 32 8.7
>UniRef50_P21288 Cluster: Late expression factor 11; n=6;
Nucleopolyhedrovirus|Rep: Late expression factor 11 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 112
Score = 241 bits (589), Expect = 1e-62
Identities = 109/112 (97%), Positives = 111/112 (99%)
Frame = +3
Query: 201 MPPKNCTHLGGCNSDCLTRSEIQALFREAINTLKHTMNTEDVCAHMLDIVSFERIKEYIR 380
MPPKNCTHLGGC+SDCLTRSEIQALFREAINTLKHTMNTE+VCAHMLDIVSFERIKEYIR
Sbjct: 1 MPPKNCTHLGGCDSDCLTRSEIQALFREAINTLKHTMNTENVCAHMLDIVSFERIKEYIR 60
Query: 381 ANLGHFTVITDKCSKRKVCLHHKRIARLLGIKKIYHQEYKRVVSKVYKNQTW 536
ANLGHFTVITDKCSKRKVCLHHKRIARLLGIKKIYHQEYKRVVSKVYK QTW
Sbjct: 61 ANLGHFTVITDKCSKRKVCLHHKRIARLLGIKKIYHQEYKRVVSKVYKKQTW 112
>UniRef50_Q65330 Cluster: ORF 6; n=1; Autographa californica
nucleopolyhedrovirus|Rep: ORF 6 - Autographa californica
nuclear polyhedrosis virus (AcMNPV)
Length = 120
Score = 207 bits (505), Expect = 2e-52
Identities = 104/112 (92%), Positives = 106/112 (94%)
Frame = -1
Query: 337 MCAQTSSVFIVCLSVLMASLNSACISLRVKQSELHPPKCVQFLGGIVVVYLF*SGVEKVL 158
MCAQT SVFIVCLSVLMASLNSACISLRVKQSE HPPKCVQFLGGIVV YLF SGVEKVL
Sbjct: 1 MCAQTFSVFIVCLSVLMASLNSACISLRVKQSESHPPKCVQFLGGIVV-YLFQSGVEKVL 59
Query: 157 QLPIIETLLDAAHKTKKFNVIAVIVRDQLFVVHIIKIFVERHDGQAARYFAI 2
QLPII+T LDAAHK KKFNVIAVIVRDQLFVVHIIK+FVERHDGQAARYFAI
Sbjct: 60 QLPIIKTRLDAAHKIKKFNVIAVIVRDQLFVVHIIKVFVERHDGQAARYFAI 111
>UniRef50_P21290 Cluster: Uncharacterized 25.3 kDa protein in
39K-P43 intergenic region; n=20;
Nucleopolyhedrovirus|Rep: Uncharacterized 25.3 kDa
protein in 39K-P43 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 216
Score = 155 bits (377), Expect = 5e-37
Identities = 73/78 (93%), Positives = 74/78 (94%)
Frame = +2
Query: 2 NCEITRSLAIVPLNKYFNYMNDKQLITYDYSNYIEFFSFVRSIKKRFDNRQLQDFFYATL 181
NCEI RSLAIVPLNKYFNYMNDKQLITYDYSNYIEFF FVRS+K RFDNRQLQDFFYATL
Sbjct: 140 NCEIARSLAIVPLNKYFNYMNDKQLITYDYSNYIEFFDFVRSVKARFDNRQLQDFFYATL 199
Query: 182 KKIDNNDAPQKLHALRRV 235
KKID NDAPQKLHALRRV
Sbjct: 200 KKID-NDAPQKLHALRRV 216
>UniRef50_Q7TLW3 Cluster: Late expression factor 11; n=1;
Choristoneura fumiferana MNPV|Rep: Late expression
factor 11 - Choristoneura fumiferana nuclear
polyhedrosis virus (CfMNPV)
Length = 107
Score = 112 bits (269), Expect = 7e-24
Identities = 53/100 (53%), Positives = 71/100 (71%)
Frame = +3
Query: 237 NSDCLTRSEIQALFREAINTLKHTMNTEDVCAHMLDIVSFERIKEYIRANLGHFTVITDK 416
N +CLTRSE+ AL+ EA+NTLK T+ ++VCAH+L+ + + +K+YIRANL FTVIT K
Sbjct: 9 NINCLTRSELYALWAEAVNTLKRTLQVKNVCAHLLEADAGD-VKDYIRANLSRFTVITGK 67
Query: 417 CSKRKVCLHHKRIARLLGIKKIYHQEYKRVVSKVYKNQTW 536
CSKRKVC HH+RI R L + EY V+ VY++ W
Sbjct: 68 CSKRKVCNHHRRIKRTLELNLNLVNEYACSVTDVYRSPKW 107
>UniRef50_Q91GM8 Cluster: Late expression factor 11; n=5;
Nucleopolyhedrovirus|Rep: Late expression factor 11 -
Epiphyas postvittana nucleopolyhedrovirus (EppoMNPV)
Length = 126
Score = 112 bits (269), Expect = 7e-24
Identities = 65/131 (49%), Positives = 80/131 (61%), Gaps = 1/131 (0%)
Frame = +3
Query: 147 IGNCKTFSTPL*KR*T-TTMPPKNCTHLGGCNSDCLTRSEIQALFREAINTLKHTMNTED 323
+ NC TFS P TT+ C + N++C TRSE+ A++ E INTLK T ++
Sbjct: 1 MNNCATFSMPHSNATNHTTLSHPVCNN----NANCFTRSELYAIWSETINTLKRTFKIKN 56
Query: 324 VCAHMLDIVSFERIKEYIRANLGHFTVITDKCSKRKVCLHHKRIARLLGIKKIYHQEYKR 503
V AHML+ S E IK+YIRANL FTVIT KCSKRKVC H KRIAR L ++K EY
Sbjct: 57 VHAHMLEDDSGE-IKDYIRANLSRFTVITGKCSKRKVCHHDKRIARTLHLEKNLVDEYAC 115
Query: 504 VVSKVYKNQTW 536
V+ VY W
Sbjct: 116 SVTHVYSAPKW 126
>UniRef50_A0EYS9 Cluster: Bv-e31; n=4; Nucleopolyhedrovirus|Rep:
Bv-e31 - Ecotropis obliqua NPV
Length = 243
Score = 85.8 bits (203), Expect = 7e-16
Identities = 38/61 (62%), Positives = 48/61 (78%)
Frame = +2
Query: 2 NCEITRSLAIVPLNKYFNYMNDKQLITYDYSNYIEFFSFVRSIKKRFDNRQLQDFFYATL 181
N EI+R L IVPLN Y YMN+KQLITY+YSNY+EFF+FV+ +K FD+ +L +FF TL
Sbjct: 152 NNEISRYLYIVPLNDYIAYMNEKQLITYEYSNYLEFFTFVKKVKTAFDDGRLNEFFLITL 211
Query: 182 K 184
K
Sbjct: 212 K 212
>UniRef50_Q8V5V6 Cluster: ORF33; n=3; Nucleopolyhedrovirus|Rep:
ORF33 - Helicoverpa zea SNPV
Length = 238
Score = 74.5 bits (175), Expect = 2e-12
Identities = 41/105 (39%), Positives = 56/105 (53%)
Frame = +2
Query: 2 NCEITRSLAIVPLNKYFNYMNDKQLITYDYSNYIEFFSFVRSIKKRFDNRQLQDFFYATL 181
N EI R+L IVP+ YF YM + QL+TYD SNY++FF FV +K +D+ QL FF +L
Sbjct: 136 NHEIPRNLYIVPIKDYFQYMRESQLVTYDSSNYLDFFDFVEQVKIDYDSGQLNKFFTLSL 195
Query: 182 KKIDNNDAPQKLHALRRV*FGLLDPKRNTSAVQGSHQHAQAHNEY 316
+ + P + +RV F D K VQ H +Y
Sbjct: 196 RNVPIR-TPAIFDSEKRVQFHGAD-KTAVLRVQQRHGQRNMQRQY 238
>UniRef50_Q77LY7 Cluster: Lef-11; n=3; Nucleopolyhedrovirus|Rep:
Lef-11 - Helicoverpa armigera nucleopolyhedrovirus G4
Length = 127
Score = 68.1 bits (159), Expect = 1e-10
Identities = 38/102 (37%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Frame = +3
Query: 216 CTHLGGCNSDCLTRSEIQALFREAINTLKHTMNTEDVCAHMLDIVSFERIKEYIRANLGH 395
C + DCLTRSE+ AL RE IN KH M + VC H+ D F + YI + L
Sbjct: 16 CDQFETNHGDCLTRSEVYALLREVINWRKHHMQVDRVCDHVSD-PGFAVQQNYINSILDT 74
Query: 396 FTVITDKC--SKRKVCLHHKRIARLLGIKKIYHQEYKRVVSK 515
+++ C KR + H KR+ L +K EY + VSK
Sbjct: 75 ASLVVGDCPEKKRLLSYHSKRLTNLFNLKTTLEDEYAQAVSK 116
>UniRef50_Q0IL81 Cluster: ORF38; n=2; Nucleopolyhedrovirus|Rep:
ORF38 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 261
Score = 65.7 bits (153), Expect = 8e-10
Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = +2
Query: 2 NCEITRSLAIVPLNKYFNYMNDKQLITYDYSNYIEFFSFVRSIKKRFDNRQLQD-FFYAT 178
N EI R+L IVP YF YM + QL TY+ SNY++FF+FV ++K FD+ + FFY
Sbjct: 158 NREIQRALRIVPTRDYFRYMREHQLTTYESSNYLDFFTFVENVKNTFDSSLAPEAFFYLE 217
Query: 179 LK 184
L+
Sbjct: 218 LR 219
>UniRef50_Q7T9V6 Cluster: ORF_59; n=9; Granulovirus|Rep: ORF_59 -
Adoxophyes orana granulovirus (AoGV)
Length = 225
Score = 64.1 bits (149), Expect = 2e-09
Identities = 26/59 (44%), Positives = 41/59 (69%)
Frame = +2
Query: 8 EITRSLAIVPLNKYFNYMNDKQLITYDYSNYIEFFSFVRSIKKRFDNRQLQDFFYATLK 184
E+ R + ++ L+KY YM ++QL TY YSNY+ FF +V S++K F N +L +FF+ L+
Sbjct: 153 ELVRRIELMNLSKYITYMENRQLSTYKYSNYLLFFDYVYSVQKMFSNFELDNFFFIDLQ 211
>UniRef50_Q9YMS9 Cluster: Late expression factor 11; n=1; Lymantria
dispar MNPV|Rep: Late expression factor 11 - Lymantria
dispar multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 187
Score = 64.1 bits (149), Expect = 2e-09
Identities = 38/87 (43%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Frame = +3
Query: 246 CLTRSEIQALFREAINTLKHTMNTEDVCAHMLDIVSFERIKEYIRANLG-HFTVITDKCS 422
CL RSE+ AL REAIN KH + + VCAH+ D SF +YIR NL F V+ D C
Sbjct: 26 CLNRSEVYALTREAINKRKHLGDVKGVCAHLFD-DSFSAQSDYIRENLATAFIVVGDNCR 84
Query: 423 KRK-VCLHHKRIARLLGIK-KIYHQEY 497
+RK + H R R+ +K + + EY
Sbjct: 85 ERKHLGQHAARFDRVFSLKRRTLYDEY 111
>UniRef50_Q80LT4 Cluster: Late expression factor 11; n=1; Adoxophyes
honmai NPV|Rep: Late expression factor 11 - Adoxophyes
honmai nucleopolyhedrovirus
Length = 118
Score = 64.1 bits (149), Expect = 2e-09
Identities = 32/88 (36%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Frame = +3
Query: 237 NSDCLTRSEIQALFREAINTLKHTMNTEDVCAHMLDIVSFERIKEYIRANLGHFTVITD- 413
N+ CLTRS++ AL +E IN KH ++ AH+ D FE+ KEYIR L +++TD
Sbjct: 18 NNACLTRSDVYALVKETINKRKHDGEFCNITAHIFD-EGFEQQKEYIREKLSTASIVTDC 76
Query: 414 KCSKRKVCLHHKRIARLLGIKKIYHQEY 497
+ +++++ LH K+I + I +E+
Sbjct: 77 RQNRKRLALHRKKIESIFNIHTSLQEEF 104
>UniRef50_Q8QL85 Cluster: Late expression factor 11; n=6;
Nucleopolyhedrovirus|Rep: Late expression factor 11 -
Mamestra configurata nucleopolyhedrovirus (MacoNPV)
Length = 120
Score = 60.5 bits (140), Expect = 3e-08
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Frame = +3
Query: 246 CLTRSEIQALFREAINTLKHTMNTEDVCAHMLDIVSFERIKEYIRANLGH--FTVITDKC 419
CLTRSE+ AL RE IN KH +VC H+ D FE +YIRAN+ TV +
Sbjct: 20 CLTRSEVYALVREVINKRKHHNLVTNVCDHVFD-DGFEEQLKYIRANIDKALITVGGEHK 78
Query: 420 SKRKVCLHHKRIARLLGIKKIYHQEYKRVVSKVYKNQ 530
+++ H K+I ++ + K EYK+ + + N+
Sbjct: 79 HCKRLAAHIKKINKIFKLNKSLETEYKQSIDRYGSNR 115
>UniRef50_Q9J818 Cluster: Late expression factor 11; n=1; Spodoptera
exigua nuclear polyhedrosis virus (strain US)|Rep: Late
expression factor 11 - Spodoptera exigua nuclear
polyhedrosis virus (strain US) (SeMNPV)
Length = 104
Score = 59.7 bits (138), Expect = 5e-08
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = +3
Query: 246 CLTRSEIQALFREAINTLKHTMNTEDVCAHMLDIVSFERIKEYIRANLGH--FTVITDKC 419
CLTRS++ A RE IN KH ++ +V AH+ + F+ EYIRAN+ TV ++
Sbjct: 2 CLTRSDVYAYVRETINKRKHEVDVSNVLAHIFEF-DFQEHVEYIRANIDKALITVGGEQP 60
Query: 420 SKRKVCLHHKRIARLLGIKKIYHQEYKRVVSK 515
+++ H KRI ++ + EYK VSK
Sbjct: 61 YCKRLSYHIKRINKIFNLITSLETEYKAAVSK 92
>UniRef50_Q91BI6 Cluster: Late expression factor 11; n=1; Spodoptera
litura NPV|Rep: Late expression factor 11 - Spodoptera
litura multicapsid nucleopolyhedrovirus (SpltMNPV)
Length = 144
Score = 56.4 bits (130), Expect = 5e-07
Identities = 29/90 (32%), Positives = 49/90 (54%)
Frame = +3
Query: 246 CLTRSEIQALFREAINTLKHTMNTEDVCAHMLDIVSFERIKEYIRANLGHFTVITDKCSK 425
C++R ++ A RE IN K N ++V AH+ D F+ I+ YIR +L +I
Sbjct: 9 CMSRGDLYAYMRELINDKKWNFNLKNVWAHVHDS-EFDTIRGYIRDHLDDAIIIHKDLRY 67
Query: 426 RKVCLHHKRIARLLGIKKIYHQEYKRVVSK 515
+++C H RI LL + + +EY+ +S+
Sbjct: 68 KRLCHHRARIENLLKLNQSLKKEYENSISR 97
>UniRef50_A1YJB0 Cluster: Late expression factor 11; n=1; Spodoptera
frugiperda MNPV|Rep: Late expression factor 11 -
Spodoptera frugiperda nuclear polyhedrosis virus (SfNPV)
Length = 133
Score = 56.0 bits (129), Expect = 6e-07
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Frame = +3
Query: 237 NSDCLTRSEIQALFREAINTLKHTMNTEDVCAHMLDIVSFERIKEYIRANL--GHFTVIT 410
N CLTRSE AL RE IN KH + +V H+ + F+ EYIRANL TV
Sbjct: 31 NQCCLTRSETYALCREVINKRKHDNDLSNVWTHIFE-PGFQEQLEYIRANLDKAFITVGG 89
Query: 411 DKCSKRKVCLHHKRIARLLGIKKIYHQEYKRVVSK 515
++ +++ H ++I ++ + EYK SK
Sbjct: 90 EQPHCKRLFYHAQKIEKIFNLTTSLENEYKTAYSK 124
>UniRef50_Q0IL82 Cluster: Lef-11; n=2; Leucania separata nuclear
polyhedrosis virus|Rep: Lef-11 - Leucania separata
nuclear polyhedrosis virus (LsNPV)
Length = 218
Score = 51.6 bits (118), Expect = 1e-05
Identities = 30/93 (32%), Positives = 45/93 (48%)
Frame = +3
Query: 237 NSDCLTRSEIQALFREAINTLKHTMNTEDVCAHMLDIVSFERIKEYIRANLGHFTVITDK 416
N CLTRS++ A RE IN K + E V AHM D F+ + YIR L +I
Sbjct: 36 NCGCLTRSDVYAYVREIINRRKFNYDFEGVWAHMND-PQFDTQRGYIRRCLRDALIIHKD 94
Query: 417 CSKRKVCLHHKRIARLLGIKKIYHQEYKRVVSK 515
+++ H +RI + + +EY+ + K
Sbjct: 95 LGCKRLFRHRERIDNIFNLNTTLKKEYENSIKK 127
>UniRef50_A0EYS8 Cluster: Late expression factor 11; n=1; Ecotropis
obliqua NPV|Rep: Late expression factor 11 - Ecotropis
obliqua NPV
Length = 121
Score = 50.8 bits (116), Expect = 2e-05
Identities = 24/51 (47%), Positives = 33/51 (64%)
Frame = +3
Query: 237 NSDCLTRSEIQALFREAINTLKHTMNTEDVCAHMLDIVSFERIKEYIRANL 389
+S CLTRSE+ AL RE IN KH + E VC H ++ + F+ +YIR N+
Sbjct: 19 HSQCLTRSEVYALLREVINKRKHENDHEGVCDH-INSIDFQAQLDYIRQNI 68
>UniRef50_Q6QXJ5 Cluster: ORF52; n=3; Granulovirus|Rep: ORF52 -
Agrotis segetum granulosis virus (AsGV) (Agrotis
segetumgranulovirus)
Length = 106
Score = 50.0 bits (114), Expect = 4e-05
Identities = 28/96 (29%), Positives = 46/96 (47%)
Frame = +3
Query: 234 CNSDCLTRSEIQALFREAINTLKHTMNTEDVCAHMLDIVSFERIKEYIRANLGHFTVITD 413
C LT+S + A+ RE +N KH +TE+V AH+ D +F I E+I AN +
Sbjct: 5 CQESLLTKSHVYAIVRECVNFKKHNFDTENVLAHVED-SNFSVISEFINANADRIFIRQP 63
Query: 414 KCSKRKVCLHHKRIARLLGIKKIYHQEYKRVVSKVY 521
+ + H +R++ + + K EY + Y
Sbjct: 64 QLD-IPITPHRERLSYIFNLPKNLELEYLYCEQRYY 98
>UniRef50_Q91EZ7 Cluster: ORF58 LEF-11; n=4; Granulovirus|Rep: ORF58
LEF-11 - Cydia pomonella granulosis virus (CpGV) (Cydia
pomonellagranulovirus)
Length = 134
Score = 48.4 bits (110), Expect = 1e-04
Identities = 27/94 (28%), Positives = 47/94 (50%)
Frame = +3
Query: 249 LTRSEIQALFREAINTLKHTMNTEDVCAHMLDIVSFERIKEYIRANLGHFTVITDKCSKR 428
LT+S++ A+ RE IN K T +T+DV AH ++ FE I+++I + + K
Sbjct: 28 LTKSQVYAIVREVINYRKSTNDTQDVTAH-VETPQFETIRQFINTHADRIVIKHFKRQDT 86
Query: 429 KVCLHHKRIARLLGIKKIYHQEYKRVVSKVYKNQ 530
V H R+ L + EY +++ +N+
Sbjct: 87 AVAPHLSRLNYLFNLPTTIRDEYTYCLNRNNQNE 120
>UniRef50_A5IZQ1 Cluster: Lef-11; n=1; Spodoptera litura
granulovirus|Rep: Lef-11 - Spodoptera litura
granulovirus
Length = 98
Score = 46.0 bits (104), Expect = 7e-04
Identities = 27/95 (28%), Positives = 48/95 (50%)
Frame = +3
Query: 249 LTRSEIQALFREAINTLKHTMNTEDVCAHMLDIVSFERIKEYIRANLGHFTVITDKCSKR 428
L++S + ++ RE IN KH +TEDV AH ++ +FE + YI ++ +
Sbjct: 3 LSKSHLYSILREVINYKKHNFDTEDVVAH-VEEAAFEELFAYILRCADKIFILQPDLYE- 60
Query: 429 KVCLHHKRIARLLGIKKIYHQEYKRVVSKVYKNQT 533
+ H RI LL + K +EY +++ N++
Sbjct: 61 SIAPHKNRIRHLLKLPKTLQEEYLYCDARLCANRS 95
>UniRef50_Q6KC24 Cluster: Late expression factor 11; n=1; Orgyia
ericae nucleopolyhedrovirus|Rep: Late expression factor
11 - Orgyia ericae nucleopolyhedrovirus
Length = 50
Score = 41.5 bits (93), Expect = 0.014
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +3
Query: 243 DCLTRSEIQALFREAINTLKHTMNTEDVC 329
+CLTRSE+ AL RE IN KHT +T VC
Sbjct: 21 ECLTRSEVYALVREVINKRKHTNDTAGVC 49
>UniRef50_O63897 Cluster: RNA-dependent RNA polymerase; n=1;
Bryopsis cinicola|Rep: RNA-dependent RNA polymerase -
Bryopsis cinicola
Length = 824
Score = 38.3 bits (85), Expect = 0.13
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = +3
Query: 339 LDIVSFERIKEYIRANLGHFTVITDKCSKRKVCLHHKRIARLLGIKKIYHQEYK 500
L I +RI + AN GH+T + KR C+H IA+ L KKI Q YK
Sbjct: 222 LKIDDLDRISVNLNANSGHYTSLLFGSKKRDSCVHSNLIAKEL-FKKITKQPYK 274
>UniRef50_Q9DVY6 Cluster: PxORF46 peptide; n=1; Plutella xylostella
granulovirus|Rep: PxORF46 peptide - Plutella xylostella
granulovirus
Length = 96
Score = 37.5 bits (83), Expect = 0.23
Identities = 24/84 (28%), Positives = 39/84 (46%)
Frame = +3
Query: 249 LTRSEIQALFREAINTLKHTMNTEDVCAHMLDIVSFERIKEYIRANLGHFTVITDKCSKR 428
LTRS+ A+ RE IN K +T V AH ++ F + +I + H I S +
Sbjct: 7 LTRSKAYAVLRETINYRKSKFDTNSVVAH-VEEPQFCKNSSFIN-DRAHKIFIQQPDSTQ 64
Query: 429 KVCLHHKRIARLLGIKKIYHQEYK 500
+ H ++ L + K +EY+
Sbjct: 65 SIASHRDKLNHLFNLPKTLDEEYE 88
>UniRef50_Q5CWM7 Cluster: Large protein with ARM repeats; n=4;
Cryptosporidium|Rep: Large protein with ARM repeats -
Cryptosporidium parvum Iowa II
Length = 2558
Score = 35.5 bits (78), Expect = 0.93
Identities = 25/110 (22%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Frame = -1
Query: 376 IYSFIRSNDT--MSNMCAQTSSVFIVCLSVLMASLNSACISLRVKQSELHPPKCVQFLGG 203
+ + SND+ ++++C ++F C+ L ++ ++C+ + L + V+ G
Sbjct: 112 VNGLVESNDSAILASICTTIENLF--CIGALDSTTAASCLGKFYESKYLGSSELVKVTGA 169
Query: 202 IVVVYLF*SGVEKVLQLPIIETLLDAAHK-TKKFNVIAVIVRDQLFVVHI 56
I + SG+ ++Q I L+ AH TK N A ++ + L +V +
Sbjct: 170 ICAIAHQESGIAALVQAGIGSKTLNFAHNWTKSDNESAALIENCLEIVRL 219
>UniRef50_Q9PVE8 Cluster: Cytochrome P450 3A30; n=4;
Percomorpha|Rep: Cytochrome P450 3A30 - Fundulus
heteroclitus (Killifish) (Mummichog)
Length = 496
Score = 34.7 bits (76), Expect = 1.6
Identities = 24/82 (29%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Frame = +2
Query: 62 NDKQLITYDYSN----YIEFFSFVRSIKKRFD----NRQLQDFFYATLKKI-DNNDAPQK 214
N K+++ +D+ N + FF F+ I ++F+ + + DFFYA+L+KI N +A Q+
Sbjct: 205 NIKKMLKFDFLNPLFLAVAFFPFLGPILEKFELSFFPKSVTDFFYASLEKIKSNREASQQ 264
Query: 215 LHALRRV*FGLLDPKRNTSAVQ 280
+ + ++D ++N+ A Q
Sbjct: 265 KSRVDFLQL-MIDSQKNSGAQQ 285
>UniRef50_A7JHR1 Cluster: DNA primase; n=12; Francisella
tularensis|Rep: DNA primase - Francisella tularensis
subsp. novicida GA99-3549
Length = 605
Score = 34.3 bits (75), Expect = 2.2
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 5/57 (8%)
Frame = +2
Query: 71 QLITYDYSNYIEFF----SF-VRSIKKRFDNRQLQDFFYATLKKIDNNDAPQKLHAL 226
QL+T DY +Y E+F S+ +R+ +K++ + Q+ + LK+++N+ ++L L
Sbjct: 522 QLLTEDYPDYREYFFELLSYGIRNTQKKYAEDKYQEQMFVMLKRVENSSVKKRLKYL 578
>UniRef50_A5Z483 Cluster: Putative uncharacterized protein; n=1;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 185
Score = 33.9 bits (74), Expect = 2.8
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Frame = -1
Query: 193 VYLF*S-GVEKVLQLPIIETLLDAAHKTKKFNVIAVIVRDQLFV--VHIIKIFVERH 32
VY F + G+E+V L +I+ L +TKK NV+ V ++D+L V H IK++ +++
Sbjct: 4 VYAFLADGMEEVEALMVIDLL----RRTKKLNVVTVSIKDELLVKSSHNIKLYADKN 56
>UniRef50_P24933 Cluster: Late 100 kDa protein; n=12;
Mastadenovirus|Rep: Late 100 kDa protein - Human
adenovirus 5 (HAdV-5)
Length = 807
Score = 33.5 bits (73), Expect = 3.8
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +3
Query: 234 CNSDCLTRSEIQALFREAINTLKHTMNTEDVCAHMLDIVSFERIKEYIRANLGHFT 401
C +C + E+Q L ++ + L N V AH+ DI+ ER+ + ++ L FT
Sbjct: 438 CLEECNLK-ELQKLLKQNLKDLWTAFNERSVAAHLADIIFPERLLKTLQQGLPDFT 492
>UniRef50_A1VH78 Cluster: Diguanylate cyclase; n=2; Desulfovibrio
vulgaris subsp. vulgaris|Rep: Diguanylate cyclase -
Desulfovibrio vulgaris subsp. vulgaris (strain DP4)
Length = 378
Score = 33.1 bits (72), Expect = 5.0
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +3
Query: 234 CNS--DCLTRSEIQALFREAINTLKHTMNTEDVCAHMLDIVSFERIKEYIRANLGHFTVI 407
CN+ D LTR + + FR AI+ + TMN +C M+D+ + I + + G +
Sbjct: 223 CNAETDELTRLDNRTAFRNAIHVAR-TMNPLRLCVAMIDMDGLKAINDRYGHHAGDDAIR 281
Query: 408 TDKCSKRKVCLHHKRIARLLG 470
T + R V R+ RL G
Sbjct: 282 TLAATMRLVFDRKTRLMRLGG 302
>UniRef50_A6DDS4 Cluster: Putative uncharacterized protein; n=1;
Caminibacter mediatlanticus TB-2|Rep: Putative
uncharacterized protein - Caminibacter mediatlanticus
TB-2
Length = 107
Score = 32.7 bits (71), Expect = 6.6
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 32 VPLNKYFNYMN-DKQLITYDYSNYIEFFSFVRSIKKRFDNRQLQDFFYATLKKIDNNDAP 208
V L +Y++Y+ DK+ + + ++ S+KK FD LQD ++ + + DN
Sbjct: 40 VKLKRYYHYIIVDKKQDIKPFFRALRNGGYIISLKK-FDEEYLQDIGFSAISEFDNLQII 98
Query: 209 QKLHA 223
+K+H+
Sbjct: 99 KKVHS 103
>UniRef50_A5VJ12 Cluster: Negative regulator of genetic competence;
n=2; Lactobacillus reuteri|Rep: Negative regulator of
genetic competence - Lactobacillus reuteri F275
Length = 223
Score = 32.7 bits (71), Expect = 6.6
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Frame = +2
Query: 143 DNRQLQDFFYATLKKID------NNDAPQKLHALRRV*FGL-LDPKRNTSAVQGSHQHAQ 301
D++Q++DFFY+ LK++D NNDA + GL L +N S G+ QH
Sbjct: 33 DHQQIEDFFYSILKEVDTDHQFQNNDA--VTFQVMPTNNGLELFISKNDSNFAGNEQHGP 90
Query: 302 AHNEYRRRLRAHV 340
+++ + ++ H+
Sbjct: 91 INDQVSKYIKQHL 103
>UniRef50_Q0YIG7 Cluster: Putative uncharacterized protein
precursor; n=1; Geobacter sp. FRC-32|Rep: Putative
uncharacterized protein precursor - Geobacter sp. FRC-32
Length = 262
Score = 32.3 bits (70), Expect = 8.7
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = -1
Query: 316 VFIVCLSVLMASLNSACISLRVKQSELHPPKCVQFLGGIVV 194
VF C S++ +++ + +R+KQS + P VQF GG+ +
Sbjct: 157 VFNQCNSLISSNIIRPVMVMRIKQSNVDPSTTVQFRGGLQI 197
>UniRef50_A6ATZ2 Cluster: Putative uncharacterized protein; n=2;
Vibrio harveyi|Rep: Putative uncharacterized protein -
Vibrio harveyi HY01
Length = 331
Score = 32.3 bits (70), Expect = 8.7
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 20 SLAIVPLNKYFNYMNDKQLITYDYSNY-IEFFSFVRSIKKRFDNRQLQDFFYA 175
+L + N+ FN + +IT D N I ++ IKK + R +Q FFYA
Sbjct: 37 TLGLEQQNRLFNTKEWQNIITIDRGNRSIAVPKAIKEIKKALNGRSIQRFFYA 89
>UniRef50_Q98SB8 Cluster: Putative uncharacterized protein orf224;
n=1; Guillardia theta|Rep: Putative uncharacterized
protein orf224 - Guillardia theta (Cryptomonas phi)
Length = 224
Score = 32.3 bits (70), Expect = 8.7
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 41 NKYFNYMNDKQLITYDYSNYIEFFSFVRSIKKRFDNRQLQDFFYATLKK 187
N YF N+K +++ +Y + + F F+ K F N L +F KK
Sbjct: 58 NDYFILKNNKNMLSNEYGLFFKIFVFIDKQFKNFKNFSLGEFIIWICKK 106
>UniRef50_Q4MZN7 Cluster: Clathrin heavy chain, putative; n=1;
Theileria parva|Rep: Clathrin heavy chain, putative -
Theileria parva
Length = 1696
Score = 32.3 bits (70), Expect = 8.7
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -1
Query: 148 IIETLLDAAHKTKKFNVIAVIVRDQLFVVHIIKIFVERH 32
+I TLLD + + N + VRD L + II I ERH
Sbjct: 868 VIATLLDLSASEQLINKVLATVRDPLLIKSIINISEERH 906
>UniRef50_Q6H501 Cluster: Probable cation transporter HKT6; n=4;
Oryza sativa|Rep: Probable cation transporter HKT6 -
Oryza sativa subsp. japonica (Rice)
Length = 530
Score = 32.3 bits (70), Expect = 8.7
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = -1
Query: 259 LRVKQSELHPPKCVQFLGGIVVVYLF*SGVEKVLQLPIIETLLDAAHKTKKFNVIAVIV 83
LR++ PK ++FLG +V+ YL + + L + + L+ +AHK K I +IV
Sbjct: 176 LRMENGGHVEPKTIKFLGFVVMGYLLITNLGGSLLIYLYLNLVPSAHKILKRKGIGIIV 234
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,270,072
Number of Sequences: 1657284
Number of extensions: 11462900
Number of successful extensions: 32052
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 30928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32020
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40820699206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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