Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21d12
         (586 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021460-1|AAX33608.1| 1761|Drosophila melanogaster AT17561p pro...    31   1.5  
AE014298-3093|ABI30991.1| 1997|Drosophila melanogaster CG34120-P...    31   1.5  
AE014298-2800|AAF48917.3|  380|Drosophila melanogaster CG7440-PA...    28   8.1  

>BT021460-1|AAX33608.1| 1761|Drosophila melanogaster AT17561p
           protein.
          Length = 1761

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
 Frame = +3

Query: 249 LTRSEIQALFREAI-NTLKHTMN--TEDVCAHMLDIVSFERIKEYIRANLGHFTVITDKC 419
           LT+    A F+EA  N LK   +   + +     DI   ER+ EYIR N   + ++T   
Sbjct: 72  LTKLHTNATFQEAFDNLLKLAKSPLVKSLVGDDFDIGEIERVFEYIRTNQLIYDILTTVA 131

Query: 420 SKRKVCLHHKRIARLLGIKKIYHQEYKRVVSKVY 521
                C+   R   +  +++++ + Y+   +K++
Sbjct: 132 DLMD-CVSADRFEAVESVEELHKRAYELNQNKLF 164


>AE014298-3093|ABI30991.1| 1997|Drosophila melanogaster CG34120-PC,
           isoform C protein.
          Length = 1997

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
 Frame = +3

Query: 249 LTRSEIQALFREAI-NTLKHTMN--TEDVCAHMLDIVSFERIKEYIRANLGHFTVITDKC 419
           LT+    A F+EA  N LK   +   + +     DI   ER+ EYIR N   + ++T   
Sbjct: 308 LTKLHTNATFQEAFDNLLKLAKSPLVKSLVGDDFDIGEIERVFEYIRTNQLIYDILTTVA 367

Query: 420 SKRKVCLHHKRIARLLGIKKIYHQEYKRVVSKVY 521
                C+   R   +  +++++ + Y+   +K++
Sbjct: 368 DLMD-CVSADRFEAVESVEELHKRAYELNQNKLF 400


>AE014298-2800|AAF48917.3|  380|Drosophila melanogaster CG7440-PA,
           isoform A protein.
          Length = 380

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +2

Query: 50  FNYMNDKQLITYDYSNY 100
           F+Y++ KQL  YDY NY
Sbjct: 331 FHYVHSKQLYVYDYFNY 347


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,081,415
Number of Sequences: 53049
Number of extensions: 577981
Number of successful extensions: 1659
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1654
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2338128087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)