Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc21d10
(513 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00005A268C Cluster: PREDICTED: similar to ribosomal ... 89 5e-17
UniRef50_P62906 Cluster: 60S ribosomal protein L10a; n=212; Euka... 89 5e-17
UniRef50_UPI0000E49458 Cluster: PREDICTED: similar to Rpl10a-pro... 85 9e-16
UniRef50_Q018L4 Cluster: RL10A_CHLRE 60S ribosomal protein L10a;... 79 8e-14
UniRef50_A2WX71 Cluster: Putative uncharacterized protein; n=2; ... 76 5e-13
UniRef50_Q9UVJ4 Cluster: 60S ribosomal protein L10a; n=8; Ascomy... 73 5e-12
UniRef50_UPI00005A509E Cluster: PREDICTED: similar to ribosomal ... 67 3e-10
UniRef50_UPI00005A03AD Cluster: PREDICTED: similar to ribosomal ... 66 3e-10
UniRef50_Q22UX9 Cluster: L1P family of ribosomal proteins contai... 58 1e-07
UniRef50_A2F0R8 Cluster: Ribosomal protein L10a; n=4; Trichomona... 57 2e-07
UniRef50_A0CRX7 Cluster: Chromosome undetermined scaffold_253, w... 51 1e-05
UniRef50_Q76KS4 Cluster: Ribosomal protein L10a; n=2; Giardia in... 50 3e-05
UniRef50_UPI00005A4EEC Cluster: PREDICTED: similar to ribosomal ... 46 7e-04
UniRef50_O15613 Cluster: 60S ribosomal protein L10a; n=1; Entamo... 44 0.002
UniRef50_Q3LW91 Cluster: Ribosomal protein 10a; n=1; Bigelowiell... 38 0.18
UniRef50_Q7RQ69 Cluster: Putative uncharacterized protein PY0123... 36 0.54
UniRef50_O28782 Cluster: 50S ribosomal protein L1P; n=3; Archaea... 35 1.2
UniRef50_Q6E4P9 Cluster: 60S ribosomal protein L10a; n=1; Antono... 34 1.7
UniRef50_Q5QBG3 Cluster: Serine protease; n=1; Culicoides sonore... 34 2.2
UniRef50_Q971J1 Cluster: 50S ribosomal protein L1P; n=5; Sulfolo... 34 2.2
UniRef50_Q8PY52 Cluster: 50S ribosomal protein L1P; n=7; Archaea... 34 2.2
UniRef50_Q5QZU9 Cluster: Methyl-accepting chemotaxis protein; n=... 33 3.8
UniRef50_Q4Z3Q7 Cluster: Putative uncharacterized protein; n=1; ... 33 3.8
UniRef50_A3BCJ7 Cluster: Ribosomal protein L1; n=5; Oryza sativa... 33 5.0
>UniRef50_UPI00005A268C Cluster: PREDICTED: similar to ribosomal
protein L10a isoform 4; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L10a isoform 4 -
Canis familiaris
Length = 105
Score = 89.0 bits (211), Expect = 5e-17
Identities = 42/54 (77%), Positives = 46/54 (85%)
Frame = +2
Query: 53 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVK 214
MSSKVSRDTLYE V VL ++ K+R FLETVELQI LKNYDPQKDKRFSGTV+
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVR 54
>UniRef50_P62906 Cluster: 60S ribosomal protein L10a; n=212;
Eukaryota|Rep: 60S ribosomal protein L10a - Homo sapiens
(Human)
Length = 217
Score = 89.0 bits (211), Expect = 5e-17
Identities = 42/54 (77%), Positives = 46/54 (85%)
Frame = +2
Query: 53 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVK 214
MSSKVSRDTLYE V VL ++ K+R FLETVELQI LKNYDPQKDKRFSGTV+
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVR 54
Score = 72.9 bits (171), Expect = 4e-12
Identities = 33/44 (75%), Positives = 36/44 (81%)
Frame = +1
Query: 382 SYTVRLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCMDAEALKKL 513
S TVRLK PRPK VCVLGDQQHCDEAK +++P MD EALKKL
Sbjct: 50 SGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKL 93
>UniRef50_UPI0000E49458 Cluster: PREDICTED: similar to Rpl10a-prov
protein, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to Rpl10a-prov
protein, partial - Strongylocentrotus purpuratus
Length = 155
Score = 85.0 bits (201), Expect = 9e-16
Identities = 39/51 (76%), Positives = 42/51 (82%)
Frame = +2
Query: 62 KVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVK 214
KVSRD LYE V V SK+KKR FLET+ELQ+ LKNYDPQKDKRFSGTVK
Sbjct: 1 KVSRDLLYEAVKEVQNGSKEKKRKFLETIELQVNLKNYDPQKDKRFSGTVK 51
Score = 71.3 bits (167), Expect = 1e-11
Identities = 30/44 (68%), Positives = 36/44 (81%)
Frame = +1
Query: 382 SYTVRLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCMDAEALKKL 513
S TV+L++IPRPK +C+LGDQQH DEAK +PCMD EALKKL
Sbjct: 47 SGTVKLRHIPRPKFSMCILGDQQHLDEAKANGIPCMDMEALKKL 90
>UniRef50_Q018L4 Cluster: RL10A_CHLRE 60S ribosomal protein L10a;
n=1; Ostreococcus tauri|Rep: RL10A_CHLRE 60S ribosomal
protein L10a - Ostreococcus tauri
Length = 134
Score = 78.6 bits (185), Expect = 8e-14
Identities = 36/52 (69%), Positives = 44/52 (84%)
Frame = +2
Query: 56 SSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTV 211
S K++ DTL E V+ +L+ SK+K R F+ETVELQIGLKNYDPQKDKRF+GTV
Sbjct: 74 SGKLNTDTLKEGVSFILEKSKEKPRKFVETVELQIGLKNYDPQKDKRFNGTV 125
>UniRef50_A2WX71 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 238
Score = 75.8 bits (178), Expect = 5e-13
Identities = 32/56 (57%), Positives = 44/56 (78%)
Frame = +2
Query: 59 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKYVYL 226
SK+ D L E ++ + S++K+R F+ET+ELQIGLKNYDPQKDKRFSG+VK ++
Sbjct: 2 SKLQSDALREAISQITSESREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHI 57
Score = 58.4 bits (135), Expect = 9e-08
Identities = 25/44 (56%), Positives = 35/44 (79%)
Frame = +1
Query: 382 SYTVRLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCMDAEALKKL 513
S +V+L +IPRPKM+VC+LGD QH +EA+ + + MD EALKK+
Sbjct: 49 SGSVKLPHIPRPKMKVCMLGDAQHVEEAEKMGLDYMDVEALKKM 92
>UniRef50_Q9UVJ4 Cluster: 60S ribosomal protein L10a; n=8;
Ascomycota|Rep: 60S ribosomal protein L10a - Candida
albicans (Yeast)
Length = 217
Score = 72.5 bits (170), Expect = 5e-12
Identities = 34/53 (64%), Positives = 45/53 (84%), Gaps = 1/53 (1%)
Frame = +2
Query: 59 SKVSRDTLYECVNAVLQ-SSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVK 214
SK++ + E V+ +L+ S++ KKRNFLETVELQ+GLKNYDPQ+DKRFSGT+K
Sbjct: 2 SKITSSGVREYVHKLLEYSTETKKRNFLETVELQVGLKNYDPQRDKRFSGTLK 54
Score = 44.4 bits (100), Expect = 0.002
Identities = 20/44 (45%), Positives = 26/44 (59%)
Frame = +1
Query: 382 SYTVRLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCMDAEALKKL 513
S T++L +PRP M C+ GD D AK+L V M + LKKL
Sbjct: 50 SGTLKLPQVPRPNMTTCIFGDAFDFDRAKSLGVDAMSVDDLKKL 93
>UniRef50_UPI00005A509E Cluster: PREDICTED: similar to ribosomal
protein L10a; n=2; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L10a - Canis
familiaris
Length = 268
Score = 66.9 bits (156), Expect = 3e-10
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = +1
Query: 382 SYTVRLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCMDAEALKKL 513
S T+RLK+ PR K +CVLGDQQHCDEAK + +P M+ EALKKL
Sbjct: 31 SGTIRLKFTPRLKFSICVLGDQQHCDEAKAVVIPRMNTEALKKL 74
Score = 32.7 bits (71), Expect = 5.0
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2
Query: 146 VELQIGLKNYDPQKDKRFSGTVK 214
V LQI L+N D Q D+RFSGT++
Sbjct: 13 VLLQISLQNSDSQTDRRFSGTIR 35
>UniRef50_UPI00005A03AD Cluster: PREDICTED: similar to ribosomal
protein L10a; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L10a - Canis
familiaris
Length = 303
Score = 66.5 bits (155), Expect = 3e-10
Identities = 30/44 (68%), Positives = 34/44 (77%)
Frame = +1
Query: 382 SYTVRLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCMDAEALKKL 513
S TVRLK P PK VCV+GDQQHCDEAK +++P MD E LKKL
Sbjct: 216 SGTVRLKSTPCPKFSVCVVGDQQHCDEAKAVDIPHMDIEMLKKL 259
Score = 65.7 bits (153), Expect = 6e-10
Identities = 35/69 (50%), Positives = 45/69 (65%)
Frame = +2
Query: 8 LQLPSVVIGGSLTNKMSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQK 187
L+L V++ G ++ + S T VL ++ K+R FLETVELQI LKNYDPQK
Sbjct: 152 LELEGVMLRGVSQSEKDTAKSPATPCRRRYEVLHGNQRKRRKFLETVELQITLKNYDPQK 211
Query: 188 DKRFSGTVK 214
DKRFSGTV+
Sbjct: 212 DKRFSGTVR 220
>UniRef50_Q22UX9 Cluster: L1P family of ribosomal proteins
containing protein; n=9; Eukaryota|Rep: L1P family of
ribosomal proteins containing protein - Tetrahymena
thermophila SB210
Length = 215
Score = 58.0 bits (134), Expect = 1e-07
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = +2
Query: 59 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVK 214
SK+S + L + +L S KKR F ETVELQIGL++Y+P KDKRF+G++K
Sbjct: 2 SKISSEFLKNTITQML--SDRKKREFTETVELQIGLRDYNPDKDKRFTGSIK 51
Score = 45.6 bits (103), Expect = 7e-04
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +1
Query: 388 TVRLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCMDAEALKK 510
+++L +P P ++ ++G +HC+EAK + C+D E LKK
Sbjct: 49 SIKLPNMPYPNKKIAIIGTMRHCEEAKAAGIACIDTEGLKK 89
>UniRef50_A2F0R8 Cluster: Ribosomal protein L10a; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L10a - Trichomonas
vaginalis G3
Length = 215
Score = 57.2 bits (132), Expect = 2e-07
Identities = 24/52 (46%), Positives = 38/52 (73%)
Frame = +2
Query: 71 RDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKYVYL 226
++TL + + VL+ +K KKR FLETV++Q+ LK Y+ KDKRF G++K ++
Sbjct: 6 QETLQKAIKDVLEGAKTKKRGFLETVDIQLKLKGYNVSKDKRFVGSIKLPHI 57
Score = 42.3 bits (95), Expect = 0.006
Identities = 16/39 (41%), Positives = 28/39 (71%)
Frame = +1
Query: 388 TVRLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCMDAEAL 504
+++L +I RP +++ VLG++ HC+EA+ LN+P D L
Sbjct: 51 SIKLPHIIRPNVRIGVLGNKVHCEEAQKLNIPAYDLPTL 89
>UniRef50_A0CRX7 Cluster: Chromosome undetermined scaffold_253,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_253,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 239
Score = 51.2 bits (117), Expect = 1e-05
Identities = 25/55 (45%), Positives = 39/55 (70%)
Frame = +2
Query: 59 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKYVY 223
SK+ + L + ++ +L ++ KKRNF ET ELQI L++YD QKDKRF G+ + ++
Sbjct: 26 SKLQGEQLKKYIHEML--TERKKRNFKETTELQIQLRDYDVQKDKRFQGSTRLLH 78
Score = 41.5 bits (93), Expect = 0.011
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +1
Query: 388 TVRLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCMDAEALKK 510
+ RL + P P +++ V+G+ HCD+AK L + +D + LKK
Sbjct: 73 STRLLHAPYPNIKIGVIGNLTHCDQAKALGLTAIDQDGLKK 113
>UniRef50_Q76KS4 Cluster: Ribosomal protein L10a; n=2; Giardia
intestinalis|Rep: Ribosomal protein L10a - Giardia
lamblia (Giardia intestinalis)
Length = 221
Score = 50.0 bits (114), Expect = 3e-05
Identities = 21/48 (43%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = +2
Query: 62 KVSRDTLYECVNAVLQ-SSKDKKRNFLETVELQIGLKNYDPQKDKRFS 202
+++ + L + + +++ ++ +K R FLETVELQ+GLK YDP+KD RF+
Sbjct: 7 RINPEALNKHIAEIIERATNEKPRKFLETVELQVGLKGYDPKKDPRFN 54
>UniRef50_UPI00005A4EEC Cluster: PREDICTED: similar to ribosomal
protein L10a; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L10a - Canis
familiaris
Length = 205
Score = 45.6 bits (103), Expect = 7e-04
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2
Query: 53 MSSKVSRDTLYEC-VNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVK 214
M +K S +C V VLQ ++ K LE VELQI LK YD KD+ F GT++
Sbjct: 25 MGAKKSLRQQCDCGVREVLQGNQPKNWQCLERVELQISLKKYDAVKDRHFLGTIR 79
>UniRef50_O15613 Cluster: 60S ribosomal protein L10a; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L10a - Entamoeba
histolytica
Length = 165
Score = 44.4 bits (100), Expect = 0.002
Identities = 27/53 (50%), Positives = 33/53 (62%)
Frame = +2
Query: 56 SSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVK 214
SS VSR + V +L+ K++K F ET EL + LKNYDP KDKR GT K
Sbjct: 1 SSAVSR----QGVATILKEKKERK--FGETGELHLALKNYDPDKDKRCGGTDK 47
Score = 42.7 bits (96), Expect = 0.005
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +1
Query: 388 TVRLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCMDAEALKKL 513
T +L + + +VCVLGD Q C+ A+ N+P MD +ALK L
Sbjct: 45 TDKLPNVTKANYKVCVLGDAQACEAAQKENIPHMDVDALKAL 86
>UniRef50_Q3LW91 Cluster: Ribosomal protein 10a; n=1; Bigelowiella
natans|Rep: Ribosomal protein 10a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 216
Score = 37.5 bits (83), Expect = 0.18
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +1
Query: 391 VRLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCMDAEALKKL 513
V+L + PR +++C+L DQ+H EAK L + +D +K L
Sbjct: 52 VKLPFGPRRAVKICMLADQRHITEAKNLGLYYLDINQIKLL 92
Score = 37.1 bits (82), Expect = 0.23
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +2
Query: 119 DKKRNFLETVELQIGLKNYDPQKDKRFSGTVK 214
+KKRNF+E VEL LK+ + +K K+ SG VK
Sbjct: 22 NKKRNFIEKVELNFSLKSINFKKHKKISGGVK 53
>UniRef50_Q7RQ69 Cluster: Putative uncharacterized protein PY01234;
n=13; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY01234 - Plasmodium yoelii yoelii
Length = 3623
Score = 35.9 bits (79), Expect = 0.54
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +2
Query: 119 DKKRNFLETVELQIGLKNYDPQKDKRFSGTVKYVYLKGAF*WNVIY 256
+K N +E + L G +NY +K K F+ VYL G F W V+Y
Sbjct: 2992 NKITNDIEPINLLTGTRNYFSKKSKLFTLPKGIVYLSGYFLWVVLY 3037
>UniRef50_O28782 Cluster: 50S ribosomal protein L1P; n=3;
Archaea|Rep: 50S ribosomal protein L1P - Archaeoglobus
fulgidus
Length = 215
Score = 34.7 bits (76), Expect = 1.2
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +2
Query: 65 VSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTV 211
V +D L + + +++ K KR F+ETVE+ + L+N D +K + TV
Sbjct: 3 VDKDKLVKSIEEAIKNGK--KRRFVETVEMAVNLRNVDMKKPENRIDTV 49
>UniRef50_Q6E4P9 Cluster: 60S ribosomal protein L10a; n=1;
Antonospora locustae|Rep: 60S ribosomal protein L10a -
Antonospora locustae (Nosema locustae)
Length = 211
Score = 34.3 bits (75), Expect = 1.7
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +2
Query: 140 ETVELQIGLKNYDPQKDKRFSGTVKYVYLK 229
ET+E+Q+ LK YD ++DK+F G+V + K
Sbjct: 25 ETMEVQVCLKGYDLKRDKKFDGSVVLPFQK 54
>UniRef50_Q5QBG3 Cluster: Serine protease; n=1; Culicoides
sonorensis|Rep: Serine protease - Culicoides sonorensis
Length = 225
Score = 33.9 bits (74), Expect = 2.2
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = +1
Query: 145 CRASNWSEEL*PTEGQAFLRHCKVRLPERSILVECYLFFIKIPPE*ICTG 294
C S W L P E LR KV L ++ E Y F + P +C G
Sbjct: 153 CTVSGWGNTLNPNENSEQLRATKVPLVDQEECNEAYQGFYGVTPRMVCAG 202
>UniRef50_Q971J1 Cluster: 50S ribosomal protein L1P; n=5;
Sulfolobaceae|Rep: 50S ribosomal protein L1P -
Sulfolobus tokodaii
Length = 222
Score = 33.9 bits (74), Expect = 2.2
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 68 SRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQK 187
S+D+L E + L + KRNF ++VEL + K D +K
Sbjct: 7 SKDSLVEALKVALNPENNPKRNFTQSVELIVTFKGIDMKK 46
>UniRef50_Q8PY52 Cluster: 50S ribosomal protein L1P; n=7;
Archaea|Rep: 50S ribosomal protein L1P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 213
Score = 33.9 bits (74), Expect = 2.2
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2
Query: 77 TLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDK 193
T+ E V V++ S KRNF E+V+L I LKN D + K
Sbjct: 5 TILEAVKKVIEESP--KRNFSESVDLAINLKNLDMNQPK 41
>UniRef50_Q5QZU9 Cluster: Methyl-accepting chemotaxis protein; n=1;
Idiomarina loihiensis|Rep: Methyl-accepting chemotaxis
protein - Idiomarina loihiensis
Length = 663
Score = 33.1 bits (72), Expect = 3.8
Identities = 13/45 (28%), Positives = 29/45 (64%)
Frame = -3
Query: 208 SAGETLVLLWVIVLQTNLKLYSLQKVTFLVLRGLKNGIHALVERV 74
+A ETL LW++V+ + + ++ +TF +L+G+ + + L+E +
Sbjct: 301 TASETLSQLWLLVILISAFILAIVVLTFFILKGIYSQVRELLEGI 345
>UniRef50_Q4Z3Q7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 1405
Score = 33.1 bits (72), Expect = 3.8
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +2
Query: 119 DKKRNFLETVELQIGLKNYDPQKDKRFSGTVKYVYLKGAF*WNVIY 256
+K N +E + L G +NY +K K F+ VYL G F W V+Y
Sbjct: 796 NKITNDIEPINLLXGTRNYFSKKSKLFT-LPGIVYLSGYFLWVVLY 840
>UniRef50_A3BCJ7 Cluster: Ribosomal protein L1; n=5; Oryza
sativa|Rep: Ribosomal protein L1 - Oryza sativa subsp.
japonica (Rice)
Length = 392
Score = 32.7 bits (71), Expect = 5.0
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +2
Query: 50 KMSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQK 187
K KV+ D L + + + S+ +KKRNF ETVE + L DP++
Sbjct: 177 KRPQKVAID-LVDAIREIKTSANEKKRNFTETVEAHVML-GVDPRR 220
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 536,022,062
Number of Sequences: 1657284
Number of extensions: 10670321
Number of successful extensions: 22838
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 22411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22835
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31364627325
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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