Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21d10
         (513 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   5.7  
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    21   9.9  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    21   9.9  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   9.9  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -2

Query: 473 KVLASSQCCW 444
           K +A  QCCW
Sbjct: 598 KYVAGEQCCW 607


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 427 LAFSAAVCILASPCSFTFNP 368
           L F A V I+A+P    F P
Sbjct: 9   LLFMAMVAIMAAPVEDEFEP 28


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 427 LAFSAAVCILASPCSFTFNP 368
           L F A V I+A+P    F P
Sbjct: 9   LLFMAMVAIMAAPVEDEFEP 28


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 91  ALVERVTRHFRRH 53
           A+  R+TRH+R H
Sbjct: 102 AVPARLTRHYRTH 114


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,518
Number of Sequences: 438
Number of extensions: 3204
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)