Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc21c09
(637 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0764 + 10990220-10992410,10992809-10993616,10994734-109949... 33 0.14
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 32 0.33
07_01_0635 + 4753919-4754090,4754200-4754258,4754377-4754432,475... 32 0.33
06_03_1493 - 30536442-30536615,30536729-30536921,30537026-305372... 31 0.58
03_02_0617 - 9886496-9886888,9886984-9887310 31 0.77
11_01_0128 - 1043053-1043151,1043238-1043570,1043588-1043707,104... 31 1.0
10_08_0982 - 22025279-22027277,22030256-22030488,22031205-220313... 31 1.0
01_01_0607 + 4508225-4508282,4508391-4508452,4508534-4508614,450... 31 1.0
03_01_0192 - 1534013-1535147,1535249-1535370,1535497-1535556,153... 30 1.8
04_01_0162 + 1845295-1846317,1846430-1846565,1848436-1848626,184... 29 2.3
02_05_1220 + 35021495-35021647,35022819-35022905,35022988-35023086 29 2.3
02_03_0305 + 17527906-17528148,17528986-17529051,17529624-17530808 29 2.3
02_01_0642 - 4803464-4805665,4806231-4806320 29 2.3
11_03_0068 + 9564354-9565180,9566658-9568704 28 5.4
01_01_0677 + 5201089-5201177,5201325-5202183,5202321-5202794 28 7.1
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773... 27 9.4
09_04_0285 + 16390786-16391291,16391370-16391957,16392034-163921... 27 9.4
06_03_0777 + 24522621-24522860 27 9.4
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 27 9.4
>03_02_0764 + 10990220-10992410,10992809-10993616,10994734-10994968,
10995028-10995169,10997365-10997444,10997636-10997776
Length = 1198
Score = 33.5 bits (73), Expect = 0.14
Identities = 26/102 (25%), Positives = 54/102 (52%), Gaps = 9/102 (8%)
Frame = -2
Query: 480 DLGLEIRSFKDELVGLR-----TDLRECRNDIAEFKELLKSCHGRIDAV--EARVLGLE- 325
+L + K+ L G+R ++ + ++D +F E +C ++ + +A + +E
Sbjct: 940 ELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIED 999
Query: 324 -ARLAEIVSTAAGSDLDSTVAELRIQLRERDQDLLRNDIDII 202
+ + E + GS +++ V+++ IQLRERD L+R+ D I
Sbjct: 1000 GSLVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEI 1041
>12_01_1024 - 10467644-10469274,10469424-10469482,10469820-10470357,
10470975-10471666,10471912-10472062,10473797-10473864,
10473964-10474042,10474763-10474765,10476427-10477255
Length = 1349
Score = 32.3 bits (70), Expect = 0.33
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Frame = -2
Query: 405 DIAEFKELLKS---CHGRIDAVEARVLGLEARLAEIVSTAAGSDLDSTVAELRIQLRERD 235
DI F EL KS C G +D V+ + ++ +AA + +D V + + +
Sbjct: 734 DIDHFIELGKSGTQCSGYLDLVDDLTTSVLKSSSDTCVSAAKASMDPDVLTMLREKKTCV 793
Query: 234 QDLLRNDIDIIGLPEVREESTCHLVQVVAVKLGVKLDMRDIVHAE 100
+ + N I R ES +V+A +LG+K D +DI E
Sbjct: 794 YNYMSNYTKGINCKYPRAESAA---KVIAEELGIKHDWKDITFKE 835
>07_01_0635 +
4753919-4754090,4754200-4754258,4754377-4754432,
4754698-4754842,4755506-4755580,4755844-4755933,
4756218-4756295,4757879-4758376,4758512-4758997
Length = 552
Score = 32.3 bits (70), Expect = 0.33
Identities = 25/105 (23%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Frame = -2
Query: 513 DTMNRSLESRVDLGLEIRSFKDELVGLRTDLRECRNDIAEFKELLKSCHGRIDAVEARVL 334
++ N+ LE+ EIR+ +E +R ++ + K++ K +DA++ RVL
Sbjct: 299 ESQNQRLEAAA---AEIRASAEEFATMRARFDAMQS---KSKKIWKKNKQDLDAIDERVL 352
Query: 333 GLEARLAEIVSTAAG-SDLDSTVAELRIQLRERDQDLLRNDIDII 202
L+AR AE+ + G + +L +QL ++++ ++++I
Sbjct: 353 ALDAREAEMATRCQGFEQFMEEMKQLTLQL-QKEKGTNNENVEVI 396
>06_03_1493 -
30536442-30536615,30536729-30536921,30537026-30537261,
30537859-30538031,30538860-30538910,30539020-30539455
Length = 420
Score = 31.5 bits (68), Expect = 0.58
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Frame = -2
Query: 513 DTMNRSLESRVD-LGLEIRSFKDELVGLRTDLRECRNDIAEFKELLKSCH---GRIDAVE 346
D ++ +L + ++I+ F+D + G+R+DLR+ R F EL C+ G + +
Sbjct: 202 DMLDAALSDTISKFPIDIQPFRDMIEGMRSDLRKTR--YKNFDELYMYCYYVAGTVGLMS 259
Query: 345 ARVLGLEARLAEIVSTAAGSDLDSTVA-ELRIQLRERDQDLLRNDI 211
V+G+ + + L +A +L LR+ +D R I
Sbjct: 260 VPVMGIAPESKATTESVYSAALALGIANQLTNILRDVGEDARRGRI 305
>03_02_0617 - 9886496-9886888,9886984-9887310
Length = 239
Score = 31.1 bits (67), Expect = 0.77
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = -2
Query: 408 NDIAEFKELLKSCHGRIDAVEARVLGLEARLAEIVSTAAGS--DLDSTVAELRIQLRERD 235
N I +EL +S R DAV + V EARL + V AG+ L EL++QL
Sbjct: 103 NIIKLLQELPESA--RADAVSSMVYEAEARLRDPVYGCAGAVCRLQKEANELKVQLARAQ 160
Query: 234 QDLL 223
DLL
Sbjct: 161 ADLL 164
>11_01_0128 -
1043053-1043151,1043238-1043570,1043588-1043707,
1043810-1043993,1044088-1044275,1044714-1044808,
1044884-1045003,1045232-1045350,1052717-1052799,
1052892-1053071
Length = 506
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +2
Query: 437 PTSSSLKDRISKPRSTRDSSDRFIVSASTSPSLEV*CTPTAVNP 568
PT+ SL ++ P+ST + DR I+ AS+SP A NP
Sbjct: 109 PTTKSL---VTSPKSTDEHKDRSIIHASSSPERSSHDPSAAANP 149
>10_08_0982 -
22025279-22027277,22030256-22030488,22031205-22031344,
22032783-22032957
Length = 848
Score = 30.7 bits (66), Expect = 1.0
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Frame = -2
Query: 561 TAVGVHHTSSEGDVDADTMNRSLESRVDLGLEIRSFKDELVGLRTDLRECRNDIAEFKEL 382
TAVG HH + G V D R E+ V+ G E + + T R DI + +
Sbjct: 24 TAVGPHHEIATGGVGIDVW-RHEETAVE-GTEEENEHELHYVYDTHTRLVNADILKHMRV 81
Query: 381 LKSCHGRIDAVEARVLGLEARLAEIVSTA-AGSDLDSTVAELRIQLRERDQD 229
+ S + I+ A V +E A+ +S A G+ +D + E Q+RE D
Sbjct: 82 IISANREIE--RAGVASMEISAAQSLSEADDGAAVDHFIREWMKQVRELAYD 131
>01_01_0607 +
4508225-4508282,4508391-4508452,4508534-4508614,
4508930-4508993,4509750-4509817,4510277-4510378,
4510525-4510614,4510759-4510833,4510935-4510967,
4511544-4511618,4511784-4511843,4512006-4512098
Length = 286
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/53 (24%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = -2
Query: 495 LESRVDLGLEIRS-FKDELVGLRTDLRECRNDIAEFKELLKSCHGRIDAVEAR 340
L+ ++D +I K+E+ G R L++ +++ + K++ G++D++EA+
Sbjct: 158 LDDKLDQQKQISGQIKEEVTGARLKLQDIGSEMQKIKQVAHGLGGKLDSIEAK 210
>03_01_0192 -
1534013-1535147,1535249-1535370,1535497-1535556,
1535666-1535764,1535839-1535889,1535974-1536175,
1536709-1536911,1537264-1537350,1537435-1537589,
1537640-1537723,1538121-1538325,1538497-1538724
Length = 876
Score = 29.9 bits (64), Expect = 1.8
Identities = 31/146 (21%), Positives = 70/146 (47%), Gaps = 5/146 (3%)
Frame = -2
Query: 537 SSEGDVDADTMNRSLESRVDLGLEIRSFKDELVGLRTDLR----ECRNDIAEFKELLKSC 370
SS+G V D + R +S +L ++ + LRT ++ + ++ E KE+ S
Sbjct: 206 SSDGPVSLDDVRRLEKSNAELREQLEEHVVTIETLRTQIKISEAQHEKELKELKEITSST 265
Query: 369 HGRIDAVEARVLGLEARLAEIVS-TAAGSDLDSTVAELRIQLRERDQDLLRNDIDIIGLP 193
+ +D ++ LE + +I S + + ++L +++ +L +L Q D +II
Sbjct: 266 Y--VDQAKSLQQTLEYKQKQIDSLSTSNTELQNSIKDLDERLSAYKQSRAEAD-EII--- 319
Query: 192 EVREESTCHLVQVVAVKLGVKLDMRD 115
+ ++ + C L ++ + ++ + RD
Sbjct: 320 QSQKSNICELEAQLSEERDLRREERD 345
>04_01_0162 + 1845295-1846317,1846430-1846565,1848436-1848626,
1848780-1848887,1849001-1849204,1849294-1849525,
1849602-1849751,1849830-1850007,1850416-1850519,
1850611-1850933,1851274-1851459,1851672-1851899
Length = 1020
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = -2
Query: 312 EIVSTAAGSDLDSTVAELRIQLRERDQDLLRNDIDIIGLPEVREESTCHLVQVV 151
E+V+ G L + ++QLRE D + RN + I+G R+ S L +VV
Sbjct: 927 ELVNNILGVSLANFPDLSKVQLRECDNEYSRNFMKILGTLRERDPSYHQLCRVV 980
>02_05_1220 + 35021495-35021647,35022819-35022905,35022988-35023086
Length = 112
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Frame = -2
Query: 426 DLRECRNDIAEFKELLKSCHGRIDAVEARVLGLEARLAEI-VSTAAGSDL---DSTVAEL 259
DL++ N +AE + ++ CH R+ E + L+A LAE+ S G+++ +ST+ E+
Sbjct: 47 DLKQQENVLAESRMMVPDCHKRL---ETALADLKATLAELKESNEQGAEIGEAESTITEV 103
>02_03_0305 + 17527906-17528148,17528986-17529051,17529624-17530808
Length = 497
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = -2
Query: 456 FKDELVGLRTDLRECRNDIAEFKELLKSCHGRIDAVEARVLGLEARLAEIVS 301
F+DE+ L + + D+ + K+ +I+ +E RVLG+E R ++++
Sbjct: 155 FEDEIERLSREKSNLQADLWKSKQQQSGTMNQIEDLERRVLGMEQRQTKMIA 206
>02_01_0642 - 4803464-4805665,4806231-4806320
Length = 763
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Frame = -2
Query: 429 TDLRECRNDIAEFKELLKSCHGRIDAVEARVLGLEARLAEIVSTAAGSD--LDS---TVA 265
++L E RN++ + K ++S + ++ + + RLAE+ S LDS +
Sbjct: 460 SELLEARNEVQDMKSKVESIQIAVQEKDSELSETQRRLAEVNSEVVELKQLLDSKEDQLV 519
Query: 264 ELRIQLRERDQDL--LRNDID 208
++R +L++++Q + L+N +D
Sbjct: 520 QVRTELQDKEQHIQTLQNKLD 540
>11_03_0068 + 9564354-9565180,9566658-9568704
Length = 957
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Frame = -2
Query: 402 IAEFKELLKSCHGRIDAVEARVLGLEARLAE----IVSTAAGSDLDSTVAELRIQLRERD 235
I + LL+ + R+ V++ +L L+ L+ ++ DLD V E R Q+RE
Sbjct: 17 IGKLSTLLQMKYNRLKGVDSEILSLKDELSSMNALLLKLEDIDDLDIQVKEWRDQIRELS 76
Query: 234 QDL 226
D+
Sbjct: 77 YDI 79
>01_01_0677 + 5201089-5201177,5201325-5202183,5202321-5202794
Length = 473
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -2
Query: 390 KELLKSCHGRIDAVEARVLGLEARLAEIVSTAAGSDLDSTVA 265
+E +KS ++ +E + LEARLA + AA +D T A
Sbjct: 327 REYVKSLESKLSELEEKNRELEARLASRPAAAAKNDKGETAA 368
>10_08_0829 - 20871810-20872011,20873226-20873359,20873480-20877313,
20878057-20878177,20878414-20878451,20879096-20879218,
20879308-20879505,20880270-20880356
Length = 1578
Score = 27.5 bits (58), Expect = 9.4
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = -2
Query: 465 IRSFKDELVGLRTDLRECRNDIAEFKELLKSCHGRIDAVEARVLGLEARLAEIVS--TAA 292
I + KDEL + E + + E + L+ + ++ VEA+ + L+ ++ E S T
Sbjct: 819 ITNLKDELEQVEAQKVELKLQMDESRSLITNLKDELEQVEAQKVELKLQMDESRSLITNL 878
Query: 291 GSDLDSTVAELRIQLRERDQDLLRNDIDIIGLPEVREES 175
+L+ A+ +++L+E + R L EV+E+S
Sbjct: 879 KDELEQVEAQ-KVELKENQLESHRR------LSEVQEDS 910
>09_04_0285 +
16390786-16391291,16391370-16391957,16392034-16392160,
16392291-16392477,16392585-16392741,16392847-16393201
Length = 639
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = -2
Query: 579 TPVRGLTAVGVHHTSSEGDVDADTMNRSLESRVDLGLEIRSFKDELVGLRTDLRECRNDI 400
T +R G+ H + + M++ E VD+ EI++ D + DL+ NDI
Sbjct: 266 TEMRETIDAGMTHIQESYESLGNGMDKLKEEAVDIQREIKTVGDSMSTKMQDLQSTANDI 325
>06_03_0777 + 24522621-24522860
Length = 79
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = -2
Query: 633 GWICPSCSAKVPRGDNTATPVRGLTAVGVHHTSSEGDVDADTMNRSLESRV 481
G + C+A D +R TA V HTS +GD A R + V
Sbjct: 16 GEVGSDCAAGDRGSDGRVARLRQKTAATVRHTSEDGDGQATRRKRKTVTAV 66
>02_05_0702 - 31027908-31027958,31028062-31029311,31029665-31029842,
31029955-31030017,31031597-31031704,31031772-31031836,
31031928-31032015,31032104-31032157,31032234-31032380,
31033358-31033429,31034077-31034226,31034317-31034430,
31034762-31034875,31035925-31036077,31037437-31037529,
31038202-31038318,31038984-31039086,31039192-31039376,
31039448-31039522,31040451-31040534,31041547-31041588,
31041668-31041847,31042109-31042162,31042239-31042280,
31042869-31042967,31043040-31043174,31043325-31043427,
31045061-31045134,31045227-31045270,31045393-31045471,
31045592-31045705,31045842-31045946,31046027-31046161,
31046447-31046546,31046870-31046883,31046936-31047004,
31047079-31047182,31047299-31047347,31047931-31048023,
31048102-31048210,31048619-31048755,31048851-31048928,
31049015-31049104,31049402-31049467,31049546-31049638,
31049711-31049839,31050024-31050122,31051366-31051512,
31051605-31051910
Length = 2050
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = -2
Query: 483 VDLGLEIRSFKDELVGLRTDLRECRNDIAEFKELLKSCHGRIDAVEARVLGLEARL 316
VDL + KDEL ++ LRE ++ K+LL I +E ++ G ++ L
Sbjct: 1367 VDLST-YETMKDELQNIKATLRENSAELERTKKLLSEKDSVIRNLEEKLAGCQSEL 1421
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,968,457
Number of Sequences: 37544
Number of extensions: 364475
Number of successful extensions: 1110
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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