Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21c09
         (637 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside ...    25   1.5  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   6.1  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   6.1  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   8.1  

>AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside
           phosphorylase protein.
          Length = 353

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 27/110 (24%), Positives = 44/110 (40%)
 Frame = -2

Query: 351 VEARVLGLEARLAEIVSTAAGSDLDSTVAELRIQLRERDQDLLRNDIDIIGLPEVREEST 172
           V AR +G+E  L E V T  G     TVAE+++        L    +D IG+  V E  T
Sbjct: 241 VIARQIGIENELREGVYTCLGGPNFETVAEVKM--------LSMLGVDAIGMSTVHEIIT 292

Query: 171 CHLVQVVAVKLGVKLDMRDIVHAERIGAVRRNFIEGNDNRPRILSVRLAR 22
                +      +  +M  + + E       + +    NR + L   ++R
Sbjct: 293 ARHCGMTCFAFSLITNMCTMSYEEEEEHCHDSIVGVGKNREKTLGEFVSR 342


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
 Frame = -2

Query: 588 NTATPVRGLTAVGVHHTSSEGDVDADTMNRSLESRVDLGLEIR--SFKDELVGLRTDLRE 415
           + +T     T       SSE D+D D  +  L+ +   G + R  S  D      +D  E
Sbjct: 486 SASTSSHSTTGTNGRSDSSESDIDDDCRSPRLDRKRKTGTKKRNPSSNDRSPNQNSDSTE 545

Query: 414 CRNDIA 397
              D+A
Sbjct: 546 NNEDLA 551


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = -2

Query: 360 IDAVEARVLGLEARLAEIVSTAAGSDLDSTVAELRIQLRERDQD 229
           + A+EAR+   EA+  E+    A  + D    + + ++R  D+D
Sbjct: 24  LQAIEARIADEEAKQRELERKRAEGESDFGRKKKKKEIRYDDED 67


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 13/49 (26%), Positives = 22/49 (44%)
 Frame = -2

Query: 483 VDLGLEIRSFKDELVGLRTDLRECRNDIAEFKELLKSCHGRIDAVEARV 337
           +D   ++ +  DEL  LRT + E  + I   + L+      ID   A +
Sbjct: 322 IDQEEQLAAVDDELKKLRTSIEEQEHRIRNREALVAKTDSTIDTYRADI 370


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 633,307
Number of Sequences: 2352
Number of extensions: 12909
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)