Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21c09
         (637 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-872|AAF58930.3| 1740|Drosophila melanogaster CG34146-PA...    34   0.19 
AJ849544-1|CAH61079.2| 1740|Drosophila melanogaster CAST protein.      33   0.43 
AY051853-1|AAK93277.1|  611|Drosophila melanogaster LD35238p pro...    29   5.3  
AE013599-1718|AAF58374.1|  611|Drosophila melanogaster CG4840-PA...    29   5.3  
AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-P...    29   7.0  

>AE013599-872|AAF58930.3| 1740|Drosophila melanogaster CG34146-PA
           protein.
          Length = 1740

 Score = 33.9 bits (74), Expect = 0.19
 Identities = 27/115 (23%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
 Frame = -2

Query: 591 DNTATPVRG-LTAVGVHHTSSEGDVDADTMNRSLESRVDLGLEIRSFKDELVGLRTDLRE 415
           DN     R  L+A+  HH+SSEG +   ++  ++  +     ++R  +D     + + R+
Sbjct: 408 DNQVDMARARLSAMQAHHSSSEGAL--TSLEEAIGDKEKQMAQLRDQRDRAEHEKQEERD 465

Query: 414 C-RNDIAEFKELLKSCHGRIDAVEARV--LGLEARLAEIVSTAAGSDLDSTVAEL 259
               ++A++K  L++    ++ ++ R+     E    EI   A+ S+L  + AEL
Sbjct: 466 LHEREVADYKIKLRAAESEVEKLQTRLERAVTERERLEIKLEASQSELGKSKAEL 520


>AJ849544-1|CAH61079.2| 1740|Drosophila melanogaster CAST protein.
          Length = 1740

 Score = 32.7 bits (71), Expect = 0.43
 Identities = 27/115 (23%), Positives = 55/115 (47%), Gaps = 4/115 (3%)
 Frame = -2

Query: 591 DNTATPVRG-LTAVGVHHTSSEGDVDADTMNRSLESRVDLGLEIRSFKDELVGLRTDLRE 415
           DN     R  L+A+  HH+SSEG +   ++  ++  +     ++R  +D     + + R+
Sbjct: 408 DNQVDMARARLSAMQAHHSSSEGAL--TSLEEAIGDKEKQMAQLRDQRDRAEHEKQEERD 465

Query: 414 C-RNDIAEFKELLKSCHGRIDAVEARV--LGLEARLAEIVSTAAGSDLDSTVAEL 259
               ++A++K  L++    ++ ++ R      E    EI   A+ S+L  + AEL
Sbjct: 466 LHEREVADYKIKLRAAESEVEKLQTRPERAVTERERLEIKLEASQSELGKSKAEL 520


>AY051853-1|AAK93277.1|  611|Drosophila melanogaster LD35238p
           protein.
          Length = 611

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 13/120 (10%)
 Frame = -2

Query: 498 SLESRVDLGLEIRSFKDELVGLRTDLRECRNDIAEFKELLKSC-----------HGRIDA 352
           ++ESR  +  E+   KDE+      ++    +I E    LK C             +   
Sbjct: 296 AIESRKQVSFELEKAKDEIKQRDDKVKLLEEEIDELSVALKECREENEQQVLFERNKSQN 355

Query: 351 VEARVLGLEARL--AEIVSTAAGSDLDSTVAELRIQLRERDQDLLRNDIDIIGLPEVREE 178
           +E  V  L+ RL  A+   +   S+ +    +LR+Q+ E+ + L   D  I+ L   REE
Sbjct: 356 LETEVKDLKTRLTAADDRFSEYSSNAEQVAQKLRVQVTEKQEQL---DETIMQLEIEREE 412


>AE013599-1718|AAF58374.1|  611|Drosophila melanogaster CG4840-PA
           protein.
          Length = 611

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 13/120 (10%)
 Frame = -2

Query: 498 SLESRVDLGLEIRSFKDELVGLRTDLRECRNDIAEFKELLKSC-----------HGRIDA 352
           ++ESR  +  E+   KDE+      ++    +I E    LK C             +   
Sbjct: 296 AIESRKQVSFELEKAKDEIKQRDDKVKLLEEEIDELSVALKECREENEQQVLFERNKSQN 355

Query: 351 VEARVLGLEARL--AEIVSTAAGSDLDSTVAELRIQLRERDQDLLRNDIDIIGLPEVREE 178
           +E  V  L+ RL  A+   +   S+ +    +LR+Q+ E+ + L   D  I+ L   REE
Sbjct: 356 LETEVKDLKTRLTAADDRFSEYSSNAEQVAQKLRVQVTEKQEQL---DETIMQLEIEREE 412


>AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-PA
            protein.
          Length = 1333

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
 Frame = -2

Query: 450  DELVGLRTDLRECRNDI-AEFKELLKSCHGRIDAVEARVLGLEARLAEIVSTAAGSDLDS 274
            DE+ GL+ +L E R DI  + K+L      ++DAV+  +      + + +  A  S L+ 
Sbjct: 1223 DEMDGLKKELYELRQDIEGKLKDLALKKQSKMDAVK-HLDTFNKEVIQNLDKAKTSTLEH 1281

Query: 273  TVAELRIQLRERDQDLLRNDI 211
               ++RI+ +  +Q    N++
Sbjct: 1282 KELDMRIKDQTENQIKQTNEM 1302


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,881,848
Number of Sequences: 53049
Number of extensions: 617452
Number of successful extensions: 1898
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1894
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)