Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc21c09
(637 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical pr... 37 0.014
AF024502-3|AAB70373.1| 836|Caenorhabditis elegans Hypothetical ... 32 0.30
Z78546-5|CAO79773.1| 962|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z78546-4|CAB01771.3| 920|Caenorhabditis elegans Hypothetical pr... 31 0.91
AF016448-14|AAB65960.2| 304|Caenorhabditis elegans Hypothetical... 27 0.94
Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical p... 30 1.2
Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical p... 30 1.2
U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical pr... 30 1.6
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 29 2.1
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 29 2.1
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 29 2.1
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 29 2.1
U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical pr... 29 2.1
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 29 2.1
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 29 2.1
U50069-7|AAB37561.1| 913|Caenorhabditis elegans Hypothetical pr... 29 2.8
AC024201-4|AAK93867.2| 534|Caenorhabditis elegans Hypothetical ... 29 2.8
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 28 4.9
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 28 6.4
U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical pr... 28 6.4
AF036705-4|AAO91726.1| 316|Caenorhabditis elegans Hypothetical ... 28 6.4
AF036705-3|AAB95171.1| 556|Caenorhabditis elegans Hypothetical ... 28 6.4
Z81483-8|CAB03966.2| 1776|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z81471-1|CAB03887.2| 1776|Caenorhabditis elegans Hypothetical pr... 27 8.5
>U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical
protein F59A6.5 protein.
Length = 1286
Score = 36.7 bits (81), Expect = 0.014
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Frame = -2
Query: 498 SLESRVDLGLEIRSFKDELVGLRTDLRECRNDIAEFKELLKSCHGRIDAVEARVLGLEAR 319
S E+ L E + +D+L L +L+E + IAE KEL+ H +IDA + + L R
Sbjct: 611 SQETCERLERESATKEDKLDKLEEELQEKKQQIAESKELVTYLHSQIDAKQTKQPKL-GR 669
Query: 318 LAEIVSTAAGSDLDSTV----AELRIQLRERDQDLLRN 217
+ ++ST S++D++V AE L E+ Q L+ N
Sbjct: 670 RSTLLSTV--SEMDTSVYMREAEEVRALEEQRQALMSN 705
>AF024502-3|AAB70373.1| 836|Caenorhabditis elegans Hypothetical
protein M151.3 protein.
Length = 836
Score = 32.3 bits (70), Expect = 0.30
Identities = 22/74 (29%), Positives = 35/74 (47%)
Frame = -2
Query: 519 DADTMNRSLESRVDLGLEIRSFKDELVGLRTDLRECRNDIAEFKELLKSCHGRIDAVEAR 340
D ++R S DL EI+ DE+ GLR + E R E L++ HG +D
Sbjct: 384 DTGNLDRPRFSGSDLTFEIKKLNDEISGLRQENEELRAS----NEYLRTAHG-VDVHNIS 438
Query: 339 VLGLEARLAEIVST 298
L L+ + + ++T
Sbjct: 439 QLQLQIKATQELNT 452
>Z78546-5|CAO79773.1| 962|Caenorhabditis elegans Hypothetical
protein T21H8.1b protein.
Length = 962
Score = 30.7 bits (66), Expect = 0.91
Identities = 22/94 (23%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Frame = -2
Query: 498 SLESRVD-LGLEIRSFKDELVGLRTDLRECRNDIAEFKELLKSCHGRID---AVEARVLG 331
SL+ +V L ++ + K+++ L T + RN++ +ELL+ + RID +E++ +
Sbjct: 188 SLQLQVSVLSEQVGAQKEKIKDLETVIALKRNNLTSTEELLQDKYHRIDECQELESKKMD 247
Query: 330 LEARLAEIVSTAAGSDLDSTVAELRIQLRERDQD 229
L A ++ + A + + E +++L + + D
Sbjct: 248 LLAEVSSLKLRYATLEREKNETEKKLRLSQNEMD 281
>Z78546-4|CAB01771.3| 920|Caenorhabditis elegans Hypothetical
protein T21H8.1a protein.
Length = 920
Score = 30.7 bits (66), Expect = 0.91
Identities = 22/94 (23%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Frame = -2
Query: 498 SLESRVD-LGLEIRSFKDELVGLRTDLRECRNDIAEFKELLKSCHGRID---AVEARVLG 331
SL+ +V L ++ + K+++ L T + RN++ +ELL+ + RID +E++ +
Sbjct: 188 SLQLQVSVLSEQVGAQKEKIKDLETVIALKRNNLTSTEELLQDKYHRIDECQELESKKMD 247
Query: 330 LEARLAEIVSTAAGSDLDSTVAELRIQLRERDQD 229
L A ++ + A + + E +++L + + D
Sbjct: 248 LLAEVSSLKLRYATLEREKNETEKKLRLSQNEMD 281
>AF016448-14|AAB65960.2| 304|Caenorhabditis elegans Hypothetical
protein F41E6.12 protein.
Length = 304
Score = 27.5 bits (58), Expect(2) = 0.94
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = -2
Query: 621 PSCSAKVPRGDNTATPVRGLTAVGVHHTSSEGDVDADTMNRSLESRVDLGLEIRSFKDEL 442
PS + T TP++ T SEG+ A T + L S V L RS D++
Sbjct: 70 PSTTTSTTAEPTTTTPLKSSTDSVDFDEESEGNSTASTEHEKLGSLVKLPKPERSSTDKV 129
Query: 441 V 439
V
Sbjct: 130 V 130
Score = 21.8 bits (44), Expect(2) = 0.94
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 402 IAEFKELLKSCHGRIDAVE 346
+ E + +K CHG ID E
Sbjct: 171 VIERERFVKGCHGDIDKKE 189
>Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical
protein C25G4.10 protein.
Length = 1208
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/69 (21%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = -2
Query: 417 ECRNDIAEFKELLKSCHGRIDAVEARVLGLE-ARLAEIVSTAAGSDLDSTVAELRIQLRE 241
EC +++++++ + H A+ A V +E + +++ +T + DL++ + R+QL E
Sbjct: 487 ECFSEVSKYRTCFSAAH---QALPAAVRNVEVSSISKDSATISWEDLEANIIVFRVQLFE 543
Query: 240 RDQDLLRND 214
+ +L++ +
Sbjct: 544 KGGNLIKTE 552
>Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical
protein T04A11.3 protein.
Length = 1014
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/69 (21%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = -2
Query: 417 ECRNDIAEFKELLKSCHGRIDAVEARVLGLE-ARLAEIVSTAAGSDLDSTVAELRIQLRE 241
EC +++++++ + H A+ A V +E + +++ +T + DL++ + R+QL E
Sbjct: 308 ECFSEVSKYRTCFSAAH---QALPAAVRNVEVSSISKDSATISWEDLEANIIVFRVQLFE 364
Query: 240 RDQDLLRND 214
+ +L++ +
Sbjct: 365 KGGNLIKTE 373
>Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical
protein C25G4.10 protein.
Length = 1208
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/69 (21%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = -2
Query: 417 ECRNDIAEFKELLKSCHGRIDAVEARVLGLE-ARLAEIVSTAAGSDLDSTVAELRIQLRE 241
EC +++++++ + H A+ A V +E + +++ +T + DL++ + R+QL E
Sbjct: 487 ECFSEVSKYRTCFSAAH---QALPAAVRNVEVSSISKDSATISWEDLEANIIVFRVQLFE 543
Query: 240 RDQDLLRND 214
+ +L++ +
Sbjct: 544 KGGNLIKTE 552
>U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical
protein D2092.5 protein.
Length = 908
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/36 (33%), Positives = 25/36 (69%)
Frame = -2
Query: 282 LDSTVAELRIQLRERDQDLLRNDIDIIGLPEVREES 175
L+S + +LRI+L+ +D+ +R + ++ GL +EE+
Sbjct: 642 LESEIDKLRIELKSKDESNMRMESELHGLRNYKEEN 677
>Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical
protein T13F2.3b protein.
Length = 1076
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/69 (26%), Positives = 27/69 (39%)
Frame = +3
Query: 381 GAP*TQRYHFGTLSSQFLGPPAHP*KIGFLNQGRHETPATDSSYLHQHLPRSKCDAPRQL 560
G P +QR GT + Q PP H + F + + T + +P S C P+
Sbjct: 83 GTPGSQRSSTGTPNHQMGNPPQHQQQQFFHGESPAHSQGTPMTPQSAGMPGSNCGTPQSA 142
Query: 561 STLVQELPY 587
+PY
Sbjct: 143 GGPPTSVPY 151
>Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical
protein T13F2.3a protein.
Length = 1074
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/69 (26%), Positives = 27/69 (39%)
Frame = +3
Query: 381 GAP*TQRYHFGTLSSQFLGPPAHP*KIGFLNQGRHETPATDSSYLHQHLPRSKCDAPRQL 560
G P +QR GT + Q PP H + F + + T + +P S C P+
Sbjct: 81 GTPGSQRSSTGTPNHQMGNPPQHQQQQFFHGESPAHSQGTPMTPQSAGMPGSNCGTPQSA 140
Query: 561 STLVQELPY 587
+PY
Sbjct: 141 GGPPTSVPY 149
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = -2
Query: 468 EIRSFKDELVGLRTDLRECRNDIAEFKELLKSCHGRI-DAVEAR 340
EIRS K + L LRE + +A ++ ++ HG++ DA+E++
Sbjct: 1411 EIRSMKARISTLELHLREKESKLAHLRKEIEVLHGQLHDALESK 1454
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = -2
Query: 468 EIRSFKDELVGLRTDLRECRNDIAEFKELLKSCHGRI-DAVEAR 340
EIRS K + L LRE + +A ++ ++ HG++ DA+E++
Sbjct: 1411 EIRSMKARISTLELHLREKESKLAHLRKEIEVLHGQLHDALESK 1454
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = -2
Query: 468 EIRSFKDELVGLRTDLRECRNDIAEFKELLKSCHGRI-DAVEAR 340
EIRS K + L LRE + +A ++ ++ HG++ DA+E++
Sbjct: 1171 EIRSMKARISTLELHLREKESKLAHLRKEIEVLHGQLHDALESK 1214
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = -2
Query: 468 EIRSFKDELVGLRTDLRECRNDIAEFKELLKSCHGRI-DAVEAR 340
EIRS K + L LRE + +A ++ ++ HG++ DA+E++
Sbjct: 1411 EIRSMKARISTLELHLREKESKLAHLRKEIEVLHGQLHDALESK 1454
>U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical
protein R07G3.3c protein.
Length = 1316
Score = 29.5 bits (63), Expect = 2.1
Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 15/129 (11%)
Frame = -2
Query: 465 IRSFKDELVGLRTDLRECRNDIAEFKELLKSCHGRIDAVEAR-----------VLGLEAR 319
I + +E+ LR DL + AE K ++ D+++ R V EAR
Sbjct: 537 INAQSEEMAQLRADLAVTKKSEAELKTKVEQTKAAFDSLKERTEHFKELVRDSVTAAEAR 596
Query: 318 LAEI---VSTAAGSDLDSTVAELRIQLRERDQDLLRNDIDIIGLPEVRE-ESTCHLVQVV 151
A + + AA D+T+ LR Q + D LR + D+ +R E+ V
Sbjct: 597 TARLRAEEAIAAKVVADATIERLRTQAEDYKADHLRREQDL--EQRIRNTEANIASVTET 654
Query: 150 AVKLGVKLD 124
+KL LD
Sbjct: 655 NIKLNAMLD 663
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical
protein R07G3.3a protein.
Length = 1982
Score = 29.5 bits (63), Expect = 2.1
Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 15/129 (11%)
Frame = -2
Query: 465 IRSFKDELVGLRTDLRECRNDIAEFKELLKSCHGRIDAVEAR-----------VLGLEAR 319
I + +E+ LR DL + AE K ++ D+++ R V EAR
Sbjct: 537 INAQSEEMAQLRADLAVTKKSEAELKTKVEQTKAAFDSLKERTEHFKELVRDSVTAAEAR 596
Query: 318 LAEI---VSTAAGSDLDSTVAELRIQLRERDQDLLRNDIDIIGLPEVRE-ESTCHLVQVV 151
A + + AA D+T+ LR Q + D LR + D+ +R E+ V
Sbjct: 597 TARLRAEEAIAAKVVADATIERLRTQAEDYKADHLRREQDL--EQRIRNTEANIASVTET 654
Query: 150 AVKLGVKLD 124
+KL LD
Sbjct: 655 NIKLNAMLD 663
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical
protein R07G3.3b protein.
Length = 1987
Score = 29.5 bits (63), Expect = 2.1
Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 15/129 (11%)
Frame = -2
Query: 465 IRSFKDELVGLRTDLRECRNDIAEFKELLKSCHGRIDAVEAR-----------VLGLEAR 319
I + +E+ LR DL + AE K ++ D+++ R V EAR
Sbjct: 537 INAQSEEMAQLRADLAVTKKSEAELKTKVEQTKAAFDSLKERTEHFKELVRDSVTAAEAR 596
Query: 318 LAEI---VSTAAGSDLDSTVAELRIQLRERDQDLLRNDIDIIGLPEVRE-ESTCHLVQVV 151
A + + AA D+T+ LR Q + D LR + D+ +R E+ V
Sbjct: 597 TARLRAEEAIAAKVVADATIERLRTQAEDYKADHLRREQDL--EQRIRNTEANIASVTET 654
Query: 150 AVKLGVKLD 124
+KL LD
Sbjct: 655 NIKLNAMLD 663
>U50069-7|AAB37561.1| 913|Caenorhabditis elegans Hypothetical
protein C09B9.7 protein.
Length = 913
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = -2
Query: 525 DVDADTMNRSLESRVDLGLEIRSFKDELVGLRTDLRECRNDIAEFKELLKS 373
D+ A N SLE VD IR + ++GL TD E +D+ + EL+ S
Sbjct: 183 DLMARRENYSLEIGVDTPQMIRGTLETVIGLTTD--EAMSDVNQILELVNS 231
>AC024201-4|AAK93867.2| 534|Caenorhabditis elegans Hypothetical
protein Y71F9B.6 protein.
Length = 534
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = -2
Query: 390 KELLKSCHGRIDAVEAR-VLGLEARLAEIVSTAAGSDLDSTVAELRIQLRERDQDLLRND 214
+E+ K+ G I V + V G +A ++ S + S + + QLRE DLL +
Sbjct: 446 REICKAIRGLISKVNRKCVAGAALLVALKMNDYKKSTIKSYIEQAEDQLREPKSDLLAYE 505
Query: 213 IDIIGLPEVREESTCHLVQ 157
+ I + + R + T +Q
Sbjct: 506 LPICSVLQFRLQPTIDEIQ 524
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 28.3 bits (60), Expect = 4.9
Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Frame = -2
Query: 507 MNRSLESRVDLGLEIRSFKDELVGLRTDLRECRNDIAEFKELLKSCHGRIDAVEARVLG- 331
+ R +E L I S +D+ + L L+E ++ + K K +++ G
Sbjct: 1241 IGRLVEIEKVLNNRILSLEDQNLELEERLQEMEEELLDEKNKKKEVDAKVEQKSEENWGD 1300
Query: 330 --LEARLAEIVSTAAGSDLDSTVAELRIQLRERDQDLLRNDIDIIGLPEVREE 178
+ A S S L STVAEL+ +L+ + + + + + ++I E +E
Sbjct: 1301 WGEDDAEAATESNVVVSTLQSTVAELQDRLKFQKEVIEKAEAELIETQEKYDE 1353
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = -1
Query: 583 GNSCTRVDS-CRGASHFERGRC*C 515
G+ CT + S C G S+ RGRC C
Sbjct: 603 GDLCTDITSRCTGGSYCARGRCEC 626
>U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical
protein F48E3.8b protein.
Length = 1299
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = -1
Query: 583 GNSCTRVDS-CRGASHFERGRC*C 515
G+ CT + S C G S+ RGRC C
Sbjct: 603 GDLCTDITSRCTGGSYCARGRCEC 626
>AF036705-4|AAO91726.1| 316|Caenorhabditis elegans Hypothetical
protein F37C4.5b protein.
Length = 316
Score = 27.9 bits (59), Expect = 6.4
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = +2
Query: 389 LNSAISFRHSLKSVLRPTSSSLKDRISKPRSTRDSSDRFIVSASTSPSLEV*CTPTAVNP 568
+NS ++ + + + LRP S L R PRST DS R V +T ++EV +V P
Sbjct: 216 INSQVTEKTTAVTNLRPNSVLLTIREQLPRST-DS--RIKVHLNTPEAVEV--DEASVEP 270
Query: 569 RTGVAV 586
G A+
Sbjct: 271 TVGAAI 276
>AF036705-3|AAB95171.1| 556|Caenorhabditis elegans Hypothetical
protein F37C4.5a protein.
Length = 556
Score = 27.9 bits (59), Expect = 6.4
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = +2
Query: 389 LNSAISFRHSLKSVLRPTSSSLKDRISKPRSTRDSSDRFIVSASTSPSLEV*CTPTAVNP 568
+NS ++ + + + LRP S L R PRST DS R V +T ++EV +V P
Sbjct: 456 INSQVTEKTTAVTNLRPNSVLLTIREQLPRST-DS--RIKVHLNTPEAVEV--DEASVEP 510
Query: 569 RTGVAV 586
G A+
Sbjct: 511 TVGAAI 516
>Z81483-8|CAB03966.2| 1776|Caenorhabditis elegans Hypothetical protein
C14B4.2 protein.
Length = 1776
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = -2
Query: 207 IIGLPEVREESTCHLVQVVAVKLGVKLDMRDIVHAERIGA 88
++ + + E CH+V + L K ++ H+ER GA
Sbjct: 1342 LVNMDSIVAEQECHVVSTFVLSLAEKSEILQNSHSERPGA 1381
>Z81471-1|CAB03887.2| 1776|Caenorhabditis elegans Hypothetical protein
C14B4.2 protein.
Length = 1776
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = -2
Query: 207 IIGLPEVREESTCHLVQVVAVKLGVKLDMRDIVHAERIGA 88
++ + + E CH+V + L K ++ H+ER GA
Sbjct: 1342 LVNMDSIVAEQECHVVSTFVLSLAEKSEILQNSHSERPGA 1381
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,857,384
Number of Sequences: 27780
Number of extensions: 295799
Number of successful extensions: 1011
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1011
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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