Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc21b22
(678 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0104 + 14626756-14626828,14627658-14627791,14628544-146285... 33 0.28
03_02_0619 + 9904405-9904586,9905315-9906764,9907320-9907509,990... 33 0.28
04_03_0507 + 16638385-16638466,16638823-16638978,16639220-166392... 31 0.64
05_03_0577 + 15671570-15672432,15672571-15672785,15672825-156729... 29 2.6
12_02_1263 + 27423411-27423464,27423985-27424104,27424200-274242... 29 3.4
07_01_0659 + 4946937-4946990,4947579-4947698,4947820-4947918,494... 29 3.4
02_05_0510 + 29637160-29637506,29637714-29637775,29638047-296381... 29 3.4
10_01_0333 + 3675806-3676001,3676783-3677783 29 4.5
06_01_0571 - 4038319-4040877,4040962-4041012 29 4.5
03_05_0742 + 27310404-27310457,27311281-27311286,27311350-273114... 29 4.5
02_05_1079 + 33950290-33950337,33950418-33952586,33952690-339527... 29 4.5
02_05_0611 + 30344637-30344652,30344743-30344883,30345258-303455... 29 4.5
08_02_0526 + 18184146-18184168,18184247-18184438,18184846-181849... 28 6.0
05_03_0497 - 14715267-14715548,14715648-14715830,14715911-147166... 28 6.0
01_05_0752 - 24909954-24910502,24914620-24914786,24914916-249149... 28 6.0
08_01_0722 + 6412654-6412860,6413142-6413687,6413745-6413877,641... 28 7.9
05_05_0048 + 21884078-21884951,21885586-21885899 28 7.9
02_05_0435 - 28958422-28958665,28959328-28959462,28960056-289602... 28 7.9
>09_04_0104 +
14626756-14626828,14627658-14627791,14628544-14628593,
14628684-14628776,14628897-14628988,14629279-14629385,
14631536-14631712,14631808-14632476
Length = 464
Score = 32.7 bits (71), Expect = 0.28
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Frame = +2
Query: 254 ECIKKLKNIRDFKGQARKA--QDQLLQLVKDPLFT---LSKLKFSKTDNIDVLAIKRNNK 418
+CI K++ +KG+A K D ++ + P T LSK+ K D+ AI K
Sbjct: 193 KCISLKKSLVFYKGRAAKGFKTDWMMHEFRLPSLTEPSLSKIPIDKKPAKDIWAIC---K 249
Query: 419 LISKDNKLIANKKRALSHHNGPEITSAFGS 508
+ K N + +RALSH GP+ T+ S
Sbjct: 250 IFKKPNSMA---QRALSHPWGPQSTATTSS 276
>03_02_0619 +
9904405-9904586,9905315-9906764,9907320-9907509,
9909578-9910164
Length = 802
Score = 32.7 bits (71), Expect = 0.28
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Frame = +2
Query: 377 TDNIDVLAIKRNNKLI-SKDNKLIANKKRALSHHNGPEITSAFGSVNPDSSFLEINTFDC 553
T+++DV IKR L + + L+ K+ + HHN P+ +S+ S N S E+N+
Sbjct: 292 TEDVDVSRIKRERYLSRNAVDSLLEGKESSFDHHNVPDTSSSGSSQNCVSG--EVNSRQS 349
Query: 554 HDGDDSTNSKVPVHSNDDEGNETKPLAFIKVEYSDSENI 670
+ +++ + ++ +K LA + SDSE +
Sbjct: 350 NRPSSNSSPRKNRQKYEEGSVGSKTLAEM-FALSDSERL 387
>04_03_0507 +
16638385-16638466,16638823-16638978,16639220-16639264,
16640033-16640112,16640573-16641076
Length = 288
Score = 31.5 bits (68), Expect = 0.64
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Frame = +2
Query: 410 NNKLISKDNKLIANKKRALSHHNGPEITSA--FGSVNPDSSFLEINTFDCHDGDDSTNSK 583
+ +++SK + ++K+ + +GP SA + + ++N +GD S S
Sbjct: 199 SQEIMSKATTCVDHRKQDTTRTDGPAAMSADEANATFSTGNLQQVNVIVTCNGDGSQES- 257
Query: 584 VPVHSNDDEGNET--KPLAFIKVEYSDSEN 667
+ ++ DD+ T KP F V YSDSE+
Sbjct: 258 IQKNTCDDQHAPTGSKPETFRLVNYSDSES 287
>05_03_0577 +
15671570-15672432,15672571-15672785,15672825-15672954,
15672990-15673794,15674505-15674715,15674829-15675436
Length = 943
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +2
Query: 509 VNPDSSFLEINTFDCHDGDDSTNSKVPVHSNDDEGNETKPLAFIKVEYSDS 661
V PDSS + G + + +VP SND E +P + EY D+
Sbjct: 343 VQPDSSIENVKAITTRGGTNGISKEVP--SNDLADKEVQPEKIVPQEYYDT 391
>12_02_1263 +
27423411-27423464,27423985-27424104,27424200-27424298,
27424405-27424542,27424647-27424706,27424865-27425044,
27425132-27425338,27425415-27425534,27425609-27425728,
27425819-27425941,27426074-27426178,27426379-27426523,
27426967-27427131,27427228-27427466,27427553-27427585,
27427894-27427975,27428100-27428260,27428422-27428607,
27428700-27428882,27428969-27429147,27429386-27429482
Length = 931
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = -1
Query: 513 LTDPKADVISGPL*CDRALFLFAINLLSFEINLLLRLIANTSMLSVLLNFNF 358
LT+P VI + RA+F N + +++ +R++ +L+++ F+F
Sbjct: 599 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDF 650
>07_01_0659 +
4946937-4946990,4947579-4947698,4947820-4947918,
4948038-4948175,4948268-4948402,4948501-4948609,
4948735-4948976,4949061-4949180,4949272-4949391,
4949477-4949599,4949708-4949812,4949896-4950040,
4950337-4950501,4950621-4950859,4950939-4950971,
4951082-4951163,4951314-4951474,4951566-4951751,
4951877-4952059,4952166-4952347,4952461-4952557
Length = 945
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = -1
Query: 513 LTDPKADVISGPL*CDRALFLFAINLLSFEINLLLRLIANTSMLSVLLNFNF 358
LT+P VI + RA+F N + +++ +R++ +L+++ F+F
Sbjct: 612 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDF 663
>02_05_0510 +
29637160-29637506,29637714-29637775,29638047-29638161,
29638296-29638419,29638604-29638684,29639122-29639463,
29639562-29639728,29639810-29640639,29641103-29642568
Length = 1177
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 11/76 (14%)
Frame = +2
Query: 95 KMALDSFNNL----RRSLCGGCLSSDRKLSETNYEYKHLFGELVGSTNQSAHTSLCWE-- 256
+ A +SF +L S C G ++ + + K LF + G Q +L WE
Sbjct: 441 RKAYESFRSLGATRMASACSGGMAIEYYAAGDFSNAKQLFDGVAGLYRQEGWATLLWENL 500
Query: 257 -----CIKKLKNIRDF 289
C +KLK+++DF
Sbjct: 501 GYLRECARKLKSLKDF 516
>10_01_0333 + 3675806-3676001,3676783-3677783
Length = 398
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +2
Query: 443 IANKKRALSHHNGPEITSAFGSVNPDSSFLEINTFDCHDG 562
I + +R H GP A G+ NP++ + N D + G
Sbjct: 9 IVDSRRGTQHSEGPATILAIGTANPENIMFQDNFADYYFG 48
>06_01_0571 - 4038319-4040877,4040962-4041012
Length = 869
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/52 (23%), Positives = 28/52 (53%)
Frame = -1
Query: 513 LTDPKADVISGPL*CDRALFLFAINLLSFEINLLLRLIANTSMLSVLLNFNF 358
LT+P VI + RA+F N + +++ +R++ +++++ F+F
Sbjct: 622 LTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIAIIWKFDF 673
>03_05_0742 +
27310404-27310457,27311281-27311286,27311350-27311469,
27311597-27311695,27311787-27311795,27311843-27311980,
27312084-27312218,27312308-27312517,27312592-27312798,
27312891-27313010,27313079-27313198,27313279-27313401,
27313501-27313605,27313764-27313908,27314658-27315148,
27315236-27315268,27315556-27315637,27315747-27315907,
27316021-27316206,27316294-27316476,27316573-27316751,
27317009-27317105
Length = 1000
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = -1
Query: 513 LTDPKADVISGPL*CDRALFLFAINLLSFEINLLLRLIANTSMLSVLLNFNF 358
LT+P VI + RA+F N + +++ +R++ +L+++ F+F
Sbjct: 668 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLLALIWEFDF 719
>02_05_1079 +
33950290-33950337,33950418-33952586,33952690-33952780,
33952955-33953435,33954249-33954345
Length = 961
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = -1
Query: 513 LTDPKADVISGPL*CDRALFLFAINLLSFEINLLLRLIANTSMLSVLLNFNF 358
LT+P VI + RA+F N + +++ +R++ ++++L F+F
Sbjct: 621 LTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLVALLWKFDF 672
>02_05_0611 +
30344637-30344652,30344743-30344883,30345258-30345572,
30345907-30346053,30346446-30346543,30346719-30346805,
30346870-30347080,30347589-30347674
Length = 366
Score = 28.7 bits (61), Expect = 4.5
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Frame = +2
Query: 359 KLKFSKTDNIDVLAIKRNNKLISKDNKLIANKKRA---LSHHNGP--EITSAFGSVNPDS 523
KLK S+TD+ D+L + + KD + NKK++ L + P E S +N +
Sbjct: 72 KLKSSQTDSDDMLELLTS----KKDETKLKNKKKSKKNLKEGSNPVEEHQSLSDRINAGT 127
Query: 524 SFLEINTFDCHDGDDSTNSKVPVHSNDDEGNETK 625
L+ D D+ N+ +H N DE T+
Sbjct: 128 PKLK---KDRRSSDEPNNADEVLHGNQDEETPTE 158
>08_02_0526 +
18184146-18184168,18184247-18184438,18184846-18184954,
18185071-18185220,18185973-18186136,18186273-18186359,
18187083-18187137,18187911-18188333
Length = 400
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3
Query: 661 TIRIFYFDKSKRFCFITLIIITVNRYF*ICTVISVMTVKCI 539
TIR+ Y++ R+ + I+I + R++ C VI +CI
Sbjct: 166 TIRMGYYNGPTRYRYYWSIMICIERFWLDCDVIGSYLKRCI 206
>05_03_0497 -
14715267-14715548,14715648-14715830,14715911-14716668,
14716762-14717167,14717274-14717399,14717506-14717625,
14717675-14718463,14718554-14718709,14718800-14718898,
14718989-14719108,14719165-14719251
Length = 1041
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = -1
Query: 513 LTDPKADVISGPL*CDRALFLFAINLLSFEINLLLRLIANTSMLSVLLNFNF 358
LT+P VI + RA+F N + +++ +R++ +L+++ F+F
Sbjct: 688 LTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRVVLGFLLLALIWRFDF 739
>01_05_0752 -
24909954-24910502,24914620-24914786,24914916-24914979,
24915472-24915597,24915673-24915943,24916032-24916287,
24916386-24916754,24916850-24916891,24917474-24917682,
24918074-24918109,24918509-24918918,24919314-24919438,
24920267-24920333,24921596-24921652
Length = 915
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +2
Query: 473 HNGPEITSAFGSVNPDSSFLEINTFDCHDGDDSTNSKVPVHSNDD 607
+ G + + F S P + L TF + D N+ VPV+ +DD
Sbjct: 809 NKGSTVNATFYSACPRNDLLTDGTFALVEKLDGNNNWVPVYDDDD 853
>08_01_0722 +
6412654-6412860,6413142-6413687,6413745-6413877,
6413917-6414035,6414128-6414883,6415209-6415258,
6415560-6416679
Length = 976
Score = 27.9 bits (59), Expect = 7.9
Identities = 28/106 (26%), Positives = 41/106 (38%), Gaps = 2/106 (1%)
Frame = +2
Query: 350 TLSKLKFSKTDNIDVLAIK--RNNKLISKDNKLIANKKRALSHHNGPEITSAFGSVNPDS 523
+L L F+ D L+ K N+KL NK+I + L+ T PDS
Sbjct: 227 SLKDLVFAPAKTTDALSKKLAANDKL--SFNKMIEIQLAQLASLVPANETRRIPG-QPDS 283
Query: 524 SFLEINTFDCHDGDDSTNSKVPVHSNDDEGNETKPLAFIKVEYSDS 661
S + G + + P SND E +P + EY D+
Sbjct: 284 SIENVKAITTKGGTTGISKEAP--SNDSADKEVQPEKIVSQEYCDT 327
>05_05_0048 + 21884078-21884951,21885586-21885899
Length = 395
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 548 DCHDGDDSTNSKVPVHSNDDEGNETKPLAFIKVEYSDSENI 670
D DG+ + S V V ++DD+G+E ++ + +D E +
Sbjct: 335 DDEDGEAAAGSSVHVANDDDDGSEAAAVSSMHAADNDDEAV 375
>02_05_0435 -
28958422-28958665,28959328-28959462,28960056-28960211,
28960287-28961092,28961177-28961254,28961809-28961883,
28962127-28962215,28962735-28962843,28963007-28963086,
28963739-28963794,28963876-28963958,28964049-28964118,
28964200-28964309,28964395-28964548,28965183-28965382,
28966175-28966348,28969080-28969277,28970564-28970791
Length = 1014
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/81 (20%), Positives = 35/81 (43%)
Frame = +2
Query: 407 RNNKLISKDNKLIANKKRALSHHNGPEITSAFGSVNPDSSFLEINTFDCHDGDDSTNSKV 586
R N L ++ + L + +KR +I FG NP+ + + + TN V
Sbjct: 182 RRNGLAARSSNLSSVRKRPFVARLTTDIVQTFGKCNPEFKYSD----SLNPKRFLTNPSV 237
Query: 587 PVHSNDDEGNETKPLAFIKVE 649
P H++ + + + ++ +E
Sbjct: 238 PAHNDGLDNANSDLILYVNLE 258
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,515,803
Number of Sequences: 37544
Number of extensions: 292906
Number of successful extensions: 722
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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