Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc21b22
(678 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41019-1|AAM51510.1| 542|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z82086-9|CAB04999.1| 330|Caenorhabditis elegans Hypothetical pr... 29 2.3
AL021497-22|CAA16412.1| 330|Caenorhabditis elegans Hypothetical... 29 2.3
Z81560-3|CAB04548.2| 328|Caenorhabditis elegans Hypothetical pr... 29 3.0
U53340-1|AAA96206.1| 658|Caenorhabditis elegans Hypothetical pr... 29 3.0
AL032658-1|CAA21743.2| 782|Caenorhabditis elegans Hypothetical ... 29 3.0
AC025716-15|AAO21409.1| 521|Caenorhabditis elegans Udp-glucuron... 29 3.0
Z83111-1|CAB05532.1| 331|Caenorhabditis elegans Hypothetical pr... 28 5.3
U40799-7|AAA81485.1| 208|Caenorhabditis elegans Ribosomal prote... 28 5.3
AL132860-32|CAO82074.1| 570|Caenorhabditis elegans Hypothetical... 28 5.3
AL132860-31|CAB60519.2| 457|Caenorhabditis elegans Hypothetical... 28 5.3
AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical ... 28 7.0
AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical ... 28 7.0
Z83111-2|CAB05533.2| 331|Caenorhabditis elegans Hypothetical pr... 27 9.3
U80442-5|AAB37668.2| 794|Caenorhabditis elegans Hypothetical pr... 27 9.3
AL031630-11|CAA21001.1| 334|Caenorhabditis elegans Hypothetical... 27 9.3
AF016418-8|AAK18897.1| 330|Caenorhabditis elegans Serpentine re... 27 9.3
>U41019-1|AAM51510.1| 542|Caenorhabditis elegans Hypothetical
protein C04E7.4 protein.
Length = 542
Score = 31.1 bits (67), Expect = 0.76
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +2
Query: 335 KDPLFTLSKLKFSKTDNIDVLAIKRNNKLISKDNKL 442
+ P+F + + SK +NI L +++NNKL+ K + +
Sbjct: 215 RSPVFKVPRKFVSKRENIQALILRKNNKLLIKKSNV 250
>Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical
protein F48F5.1 protein.
Length = 1291
Score = 30.3 bits (65), Expect = 1.3
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Frame = +2
Query: 302 RKAQDQLLQLVKDPLFTLSKLKFSKT-DNIDVL--AIKRNNKLISKD-NKLIA--NKKRA 463
RK D+LL+ V+ ++S+ FS+T ++ + A+K+N K ++ + NK N+ A
Sbjct: 494 RKLDDKLLESVQQTAKSVSQ--FSETLASVKKIPDAMKKNVKNVTLELNKRSESLNQSDA 551
Query: 464 LSHHNGPEITSAFGSVNPDSSFLEINTFDCHDGDDSTNSKVP 589
+SH + + S FG V +SS ++N D + K+P
Sbjct: 552 ISH-SASALRSVFGLVKLESSIGQLNDTDTIVSSEIDKIKIP 592
>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical
protein F16A11.3a protein.
Length = 1490
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Frame = +2
Query: 359 KLKFSKTDNIDVLAIKRNNKLISK--DNKLIANKKRALSHHNGPEITSAFGSVNPDSSFL 532
++K S +D+ + + ++ N+ K D+KL ++++ ++GP+ + S N S
Sbjct: 667 EIKSSSSDHSETIPVRTANQQQEKADDDKLNTDERQQYMENSGPKFNTDEDSTNDSDSDD 726
Query: 533 EINTFD---CHDGDDSTNSKVPV 592
E N F+ D DD P+
Sbjct: 727 EDNDFEKSFVADEDDGEQDDSPL 749
>Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical
protein F16A11.3c protein.
Length = 1046
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Frame = +2
Query: 359 KLKFSKTDNIDVLAIKRNNKLISK--DNKLIANKKRALSHHNGPEITSAFGSVNPDSSFL 532
++K S +D+ + + ++ N+ K D+KL ++++ ++GP+ + S N S
Sbjct: 667 EIKSSSSDHSETIPVRTANQQQEKADDDKLNTDERQQYMENSGPKFNTDEDSTNDSDSDD 726
Query: 533 EINTFD---CHDGDDSTNSKVPV 592
E N F+ D DD P+
Sbjct: 727 EDNDFEKSFVADEDDGEQDDSPL 749
>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical
protein F16A11.3a protein.
Length = 1490
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Frame = +2
Query: 359 KLKFSKTDNIDVLAIKRNNKLISK--DNKLIANKKRALSHHNGPEITSAFGSVNPDSSFL 532
++K S +D+ + + ++ N+ K D+KL ++++ ++GP+ + S N S
Sbjct: 667 EIKSSSSDHSETIPVRTANQQQEKADDDKLNTDERQQYMENSGPKFNTDEDSTNDSDSDD 726
Query: 533 EINTFD---CHDGDDSTNSKVPV 592
E N F+ D DD P+
Sbjct: 727 EDNDFEKSFVADEDDGEQDDSPL 749
>Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical
protein F16A11.3c protein.
Length = 1046
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Frame = +2
Query: 359 KLKFSKTDNIDVLAIKRNNKLISK--DNKLIANKKRALSHHNGPEITSAFGSVNPDSSFL 532
++K S +D+ + + ++ N+ K D+KL ++++ ++GP+ + S N S
Sbjct: 667 EIKSSSSDHSETIPVRTANQQQEKADDDKLNTDERQQYMENSGPKFNTDEDSTNDSDSDD 726
Query: 533 EINTFD---CHDGDDSTNSKVPV 592
E N F+ D DD P+
Sbjct: 727 EDNDFEKSFVADEDDGEQDDSPL 749
>Z82086-9|CAB04999.1| 330|Caenorhabditis elegans Hypothetical
protein ZK228.8 protein.
Length = 330
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 525 VFWKLIHLTVMTEMTVQIQKYLFTVMMMRVMKQNLLL 635
+FW L H ++ T ++QK+ F + ++V LL+
Sbjct: 220 IFWHLFHTVAQSQATNRLQKHFFLAICVQVFIPILLI 256
>AL021497-22|CAA16412.1| 330|Caenorhabditis elegans Hypothetical
protein ZK228.8 protein.
Length = 330
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 525 VFWKLIHLTVMTEMTVQIQKYLFTVMMMRVMKQNLLL 635
+FW L H ++ T ++QK+ F + ++V LL+
Sbjct: 220 IFWHLFHTVAQSQATNRLQKHFFLAICVQVFIPILLI 256
>Z81560-3|CAB04548.2| 328|Caenorhabditis elegans Hypothetical
protein K02E2.3 protein.
Length = 328
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 522 QVFWKLIHLTVMTEMTVQIQKYLFTVMMMRVM 617
++FW L H+T +++ T +QK F + V+
Sbjct: 215 RIFWYLFHITSVSKNTAHLQKQFFFAICFHVI 246
>U53340-1|AAA96206.1| 658|Caenorhabditis elegans Hypothetical
protein F02E8.4 protein.
Length = 658
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/79 (27%), Positives = 39/79 (49%)
Frame = +2
Query: 383 NIDVLAIKRNNKLISKDNKLIANKKRALSHHNGPEITSAFGSVNPDSSFLEINTFDCHDG 562
N++ LAI+ +N K+++ IA ++++ E T G + PD S L+ D
Sbjct: 344 NMEALAIEEHNN--QKEHQWIATNQQSILD----EYTHETGPLLPDPSLLQAIYPTLTDT 397
Query: 563 DDSTNSKVPVHSNDDEGNE 619
+T+S ++ DD G E
Sbjct: 398 KGNTSSSTNANTFDDSGFE 416
>AL032658-1|CAA21743.2| 782|Caenorhabditis elegans Hypothetical
protein Y76A2B.2 protein.
Length = 782
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 482 PEITSAFGSVNPDSSFLEINTFDCHDGDDSTNS 580
P S+ +P + L NTFDC D STNS
Sbjct: 468 PSFLSSSPQSHPSNFILANNTFDCLPNDCSTNS 500
>AC025716-15|AAO21409.1| 521|Caenorhabditis elegans
Udp-glucuronosyltransferase protein31 protein.
Length = 521
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -3
Query: 562 SVMTVKCINFQKT*IWIDRSKS*RDFWSVVMR*SSFLICYQFII 431
+V+ V NF + + ID + R W++ R S F C++F I
Sbjct: 70 NVIIVDKPNFSQDDVEIDMDEVLRPLWTIQNRPSDFATCFEFFI 113
>Z83111-1|CAB05532.1| 331|Caenorhabditis elegans Hypothetical
protein F57G8.1 protein.
Length = 331
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 525 VFWKLIHLTVMTEMTVQIQKYLFTVMMMRV 614
+ WKL H+ +E T ++QK F + ++V
Sbjct: 218 ICWKLFHMVSQSEATNRLQKQFFYALCLQV 247
>U40799-7|AAA81485.1| 208|Caenorhabditis elegans Ribosomal protein,
small subunitprotein 8 protein.
Length = 208
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 395 LAIKRNNKLISKDNKLIANKKRALSHHNGPEITSAFGSVNPDSSFLE 535
LA K+N KL +DN ++ NKKR SHH + T + D+ +E
Sbjct: 121 LARKKNAKLSEEDNAIL-NKKR--SHHTMKKYTERQKTAAVDALLIE 164
>AL132860-32|CAO82074.1| 570|Caenorhabditis elegans Hypothetical
protein Y56A3A.7b protein.
Length = 570
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +2
Query: 254 ECIKKLKNIRDFKGQARKAQDQL---LQLVKDPLFTLSKLKFSKTDNIDVLAIKRNNKLI 424
E + +LK + + A + ++L LQL K + +++ K ++D +A K +++
Sbjct: 143 EALLELKQVSEAAVAASELNEKLVERLQLTKRKKSAMMEVRAKKAKDLDDVATKVRAEVM 202
Query: 425 SKDNKLIANKK 457
+ NK+ A KK
Sbjct: 203 ERINKMAALKK 213
>AL132860-31|CAB60519.2| 457|Caenorhabditis elegans Hypothetical
protein Y56A3A.7a protein.
Length = 457
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +2
Query: 254 ECIKKLKNIRDFKGQARKAQDQL---LQLVKDPLFTLSKLKFSKTDNIDVLAIKRNNKLI 424
E + +LK + + A + ++L LQL K + +++ K ++D +A K +++
Sbjct: 143 EALLELKQVSEAAVAASELNEKLVERLQLTKRKKSAMMEVRAKKAKDLDDVATKVRAEVM 202
Query: 425 SKDNKLIANKK 457
+ NK+ A KK
Sbjct: 203 ERINKMAALKK 213
>AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical
protein Y47D3B.5b protein.
Length = 1136
Score = 27.9 bits (59), Expect = 7.0
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +2
Query: 200 FGELVGSTNQSAHTSLCWECIKKLKNIRDFKGQARKAQDQLLQLVKDPLFTLSKLKFSKT 379
FG+L+ ++S TS+C + + K K K +R Q L D +FT S +
Sbjct: 848 FGKLLKKKDESQQTSICDDVVGKSKKEGKKKKASRDENSQASSLGSD-VFTSSNPSSTSD 906
Query: 380 DNIDVLAIKRNNKLISK 430
D+ ++N+K I K
Sbjct: 907 DS------EKNHKKIKK 917
>AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical
protein Y47D3B.5a protein.
Length = 1088
Score = 27.9 bits (59), Expect = 7.0
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +2
Query: 200 FGELVGSTNQSAHTSLCWECIKKLKNIRDFKGQARKAQDQLLQLVKDPLFTLSKLKFSKT 379
FG+L+ ++S TS+C + + K K K +R Q L D +FT S +
Sbjct: 848 FGKLLKKKDESQQTSICDDVVGKSKKEGKKKKASRDENSQASSLGSD-VFTSSNPSSTSD 906
Query: 380 DNIDVLAIKRNNKLISK 430
D+ ++N+K I K
Sbjct: 907 DS------EKNHKKIKK 917
>Z83111-2|CAB05533.2| 331|Caenorhabditis elegans Hypothetical
protein F57G8.3 protein.
Length = 331
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 519 IQVFWKLIHLTVMTEMTVQIQKYLFTVMMMRV 614
+ +FW L ++ + T ++QK LF M ++V
Sbjct: 216 LSIFWHLFNIKSQSRATNRLQKQLFFAMCLQV 247
>U80442-5|AAB37668.2| 794|Caenorhabditis elegans Hypothetical
protein T20F5.6 protein.
Length = 794
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 203 GELVGSTNQSAHTSLCWECIKKLKNIRDFKG 295
G+ + HT +C +CIKKL N R F G
Sbjct: 126 GKRIPKVFPCGHT-ICLQCIKKLLNTRTFLG 155
>AL031630-11|CAA21001.1| 334|Caenorhabditis elegans Hypothetical
protein Y38H6C.12 protein.
Length = 334
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 519 IQVFWKLIHLTVMTEMTVQIQKYLFTVMMMRV 614
+ +FW L L + T ++QK LF M ++V
Sbjct: 216 LSIFWYLFTLKSKSRATTRLQKQLFFAMCLQV 247
>AF016418-8|AAK18897.1| 330|Caenorhabditis elegans Serpentine
receptor, class h protein169 protein.
Length = 330
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 519 IQVFWKLIHLTVMTEMTVQIQKYLFTVMMMRV 614
+ +F L H ++E T ++QK LF M ++V
Sbjct: 216 VSIFLYLFHTPTVSETTHRLQKQLFIAMCLQV 247
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,807,920
Number of Sequences: 27780
Number of extensions: 304839
Number of successful extensions: 966
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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