Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc21b12
(581 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein. 37 0.060
BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein. 37 0.060
AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein. 37 0.060
U44799-1|AAA86655.1| 246|Homo sapiens U1-snRNP binding protein ... 33 0.97
U44798-1|AAA86654.1| 246|Homo sapiens U1-snRNP binding protein ... 33 0.97
BC111955-1|AAI11956.1| 251|Homo sapiens U11/U12 snRNP 35K, isof... 33 0.97
BC093671-1|AAH93671.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 33 0.97
BC054034-1|AAH54034.1| 246|Homo sapiens U11/U12 snRNP 35K protein. 33 0.97
BC047678-1|AAH47678.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 33 0.97
BC009622-1|AAH09622.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 33 0.97
AB040936-1|BAA96027.2| 4464|Homo sapiens KIAA1503 protein protein. 32 1.3
AK128517-1|BAC87476.1| 901|Homo sapiens protein ( Homo sapiens ... 31 2.2
BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein... 31 3.9
AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein... 31 3.9
AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein... 31 3.9
AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein pr... 31 3.9
AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein... 31 3.9
Y11289-1|CAA72157.1| 471|Homo sapiens p54nrb protein. 30 6.8
U89867-1|AAC51852.1| 471|Homo sapiens nuclear matrix protein 55... 30 6.8
U02493-1|AAA03427.1| 471|Homo sapiens 54 kDa protein protein. 30 6.8
CR456761-1|CAG33042.1| 471|Homo sapiens NONO protein. 30 6.8
BC069639-1|AAH69639.1| 471|Homo sapiens non-POU domain containi... 30 6.8
BC069616-1|AAH69616.1| 471|Homo sapiens non-POU domain containi... 30 6.8
BC028299-1|AAH28299.1| 471|Homo sapiens non-POU domain containi... 30 6.8
BC012141-1|AAH12141.1| 471|Homo sapiens NONO protein protein. 30 6.8
BC003129-1|AAH03129.1| 471|Homo sapiens NONO protein protein. 30 6.8
BC002364-1|AAH02364.1| 471|Homo sapiens non-POU domain containi... 30 6.8
AK127271-1|BAC86910.1| 1091|Homo sapiens protein ( Homo sapiens ... 30 6.8
>BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 36.7 bits (81), Expect = 0.060
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 5/125 (4%)
Frame = +1
Query: 220 DDGIAAEGAENADESTEGDQNQENPDGXXXXXXXXXXXXXXGKLLVENLPSSYLFDY-QE 396
D+ EGA+N+ E ++ +E + L ++NL FD +E
Sbjct: 698 DENPTEEGADNSSAKMEEEEEEEEEEEESLPGCT---------LFIKNLN----FDTTEE 744
Query: 397 KLKELFSKHGEINTVKRGPIIVTELTTTPTLS---AIVEFKNKDSLEKALSE-HGAVVEG 564
KLKE+FSK + TVK I + LS VE++ + +KAL + G VV+G
Sbjct: 745 KLKEVFSK---VGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDG 801
Query: 565 HALSV 579
H L V
Sbjct: 802 HKLEV 806
Score = 35.5 bits (78), Expect = 0.14
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 343 GKLLVENLPSSYLFDYQEKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAIVEFKNKDS 522
G+L V NLP + +E L++LFSK+G ++ + PI LT P A + F +
Sbjct: 402 GRLFVRNLPYT---STEEDLEKLFSKYGPLSEL-HYPI--DSLTKKPKGFAFITFMFPEH 455
Query: 523 LEKALSE-HGAVVEGHALSV 579
KA SE G V +G L V
Sbjct: 456 AVKAYSEVDGQVFQGRMLHV 475
>BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 36.7 bits (81), Expect = 0.060
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 5/125 (4%)
Frame = +1
Query: 220 DDGIAAEGAENADESTEGDQNQENPDGXXXXXXXXXXXXXXGKLLVENLPSSYLFDY-QE 396
D+ EGA+N+ E ++ +E + L ++NL FD +E
Sbjct: 698 DENPTEEGADNSSAKMEEEEEEEEEEEESLPGCT---------LFIKNLN----FDTTEE 744
Query: 397 KLKELFSKHGEINTVKRGPIIVTELTTTPTLS---AIVEFKNKDSLEKALSE-HGAVVEG 564
KLKE+FSK + TVK I + LS VE++ + +KAL + G VV+G
Sbjct: 745 KLKEVFSK---VGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDG 801
Query: 565 HALSV 579
H L V
Sbjct: 802 HKLEV 806
Score = 35.5 bits (78), Expect = 0.14
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 343 GKLLVENLPSSYLFDYQEKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAIVEFKNKDS 522
G+L V NLP + +E L++LFSK+G ++ + PI LT P A + F +
Sbjct: 402 GRLFVRNLPYT---STEEDLEKLFSKYGPLSEL-HYPI--DSLTKKPKGFAFITFMFPEH 455
Query: 523 LEKALSE-HGAVVEGHALSV 579
KA SE G V +G L V
Sbjct: 456 AVKAYSEVDGQVFQGRMLHV 475
>AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein.
Length = 973
Score = 36.7 bits (81), Expect = 0.060
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 5/125 (4%)
Frame = +1
Query: 220 DDGIAAEGAENADESTEGDQNQENPDGXXXXXXXXXXXXXXGKLLVENLPSSYLFDY-QE 396
D+ EGA+N+ E ++ +E + L ++NL FD +E
Sbjct: 711 DENPTEEGADNSSAKMEEEEEEEEEEEESLPGCT---------LFIKNLN----FDTTEE 757
Query: 397 KLKELFSKHGEINTVKRGPIIVTELTTTPTLS---AIVEFKNKDSLEKALSE-HGAVVEG 564
KLKE+FSK + TVK I + LS VE++ + +KAL + G VV+G
Sbjct: 758 KLKEVFSK---VGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDG 814
Query: 565 HALSV 579
H L V
Sbjct: 815 HKLEV 819
Score = 35.5 bits (78), Expect = 0.14
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 343 GKLLVENLPSSYLFDYQEKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAIVEFKNKDS 522
G+L V NLP + +E L++LFSK+G ++ + PI LT P A + F +
Sbjct: 415 GRLFVRNLPYT---STEEDLEKLFSKYGPLSEL-HYPI--DSLTKKPKGFAFITFMFPEH 468
Query: 523 LEKALSE-HGAVVEGHALSV 579
KA SE G V +G L V
Sbjct: 469 AVKAYSEVDGQVFQGRMLHV 488
>U44799-1|AAA86655.1| 246|Homo sapiens U1-snRNP binding protein
homolog protein.
Length = 246
Score = 32.7 bits (71), Expect = 0.97
Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Frame = +1
Query: 391 QEKLKELFSKHGEINTVKRGPIIVTELTTTPTLS-AIVEFKNKDSLEKALSE-HGAVVEG 564
++KLKE+FS++G+I ++ +V +L T + A +E+K + ++ KA + G V++
Sbjct: 64 EDKLKEVFSRYGDIRRLR----LVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQ 119
Query: 565 HALSV 579
H + V
Sbjct: 120 HEIFV 124
>U44798-1|AAA86654.1| 246|Homo sapiens U1-snRNP binding protein
homolog protein.
Length = 246
Score = 32.7 bits (71), Expect = 0.97
Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Frame = +1
Query: 391 QEKLKELFSKHGEINTVKRGPIIVTELTTTPTLS-AIVEFKNKDSLEKALSE-HGAVVEG 564
++KLKE+FS++G+I ++ +V +L T + A +E+K + ++ KA + G V++
Sbjct: 64 EDKLKEVFSRYGDIRRLR----LVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQ 119
Query: 565 HALSV 579
H + V
Sbjct: 120 HEIFV 124
>BC111955-1|AAI11956.1| 251|Homo sapiens U11/U12 snRNP 35K, isoform
b protein.
Length = 251
Score = 32.7 bits (71), Expect = 0.97
Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Frame = +1
Query: 391 QEKLKELFSKHGEINTVKRGPIIVTELTTTPTLS-AIVEFKNKDSLEKALSE-HGAVVEG 564
++KLKE+FS++G+I ++ +V +L T + A +E+K + ++ KA + G V++
Sbjct: 69 EDKLKEVFSRYGDIRRLR----LVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQ 124
Query: 565 HALSV 579
H + V
Sbjct: 125 HEIFV 129
>BC093671-1|AAH93671.1| 251|Homo sapiens U11/U12 snRNP 35K protein.
Length = 251
Score = 32.7 bits (71), Expect = 0.97
Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Frame = +1
Query: 391 QEKLKELFSKHGEINTVKRGPIIVTELTTTPTLS-AIVEFKNKDSLEKALSE-HGAVVEG 564
++KLKE+FS++G+I ++ +V +L T + A +E+K + ++ KA + G V++
Sbjct: 69 EDKLKEVFSRYGDIRRLR----LVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQ 124
Query: 565 HALSV 579
H + V
Sbjct: 125 HEIFV 129
>BC054034-1|AAH54034.1| 246|Homo sapiens U11/U12 snRNP 35K protein.
Length = 246
Score = 32.7 bits (71), Expect = 0.97
Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Frame = +1
Query: 391 QEKLKELFSKHGEINTVKRGPIIVTELTTTPTLS-AIVEFKNKDSLEKALSE-HGAVVEG 564
++KLKE+FS++G+I ++ +V +L T + A +E+K + ++ KA + G V++
Sbjct: 64 EDKLKEVFSRYGDIRRLR----LVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQ 119
Query: 565 HALSV 579
H + V
Sbjct: 120 HEIFV 124
>BC047678-1|AAH47678.1| 251|Homo sapiens U11/U12 snRNP 35K protein.
Length = 251
Score = 32.7 bits (71), Expect = 0.97
Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Frame = +1
Query: 391 QEKLKELFSKHGEINTVKRGPIIVTELTTTPTLS-AIVEFKNKDSLEKALSE-HGAVVEG 564
++KLKE+FS++G+I ++ +V +L T + A +E+K + ++ KA + G V++
Sbjct: 69 EDKLKEVFSRYGDIRRLR----LVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQ 124
Query: 565 HALSV 579
H + V
Sbjct: 125 HEIFV 129
>BC009622-1|AAH09622.1| 251|Homo sapiens U11/U12 snRNP 35K protein.
Length = 251
Score = 32.7 bits (71), Expect = 0.97
Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Frame = +1
Query: 391 QEKLKELFSKHGEINTVKRGPIIVTELTTTPTLS-AIVEFKNKDSLEKALSE-HGAVVEG 564
++KLKE+FS++G+I ++ +V +L T + A +E+K + ++ KA + G V++
Sbjct: 69 EDKLKEVFSRYGDIRRLR----LVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQ 124
Query: 565 HALSV 579
H + V
Sbjct: 125 HEIFV 129
>AB040936-1|BAA96027.2| 4464|Homo sapiens KIAA1503 protein protein.
Length = 4464
Score = 32.3 bits (70), Expect = 1.3
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +2
Query: 44 YWHFLSKYHSSSSW*PK--RKVAELKLRQPNPSPLKMSLKKQKFQNKPKRTMAYRIKLSM 217
+W FL+ H S SW P + V +L++ P+PS ++ L + P + IK++
Sbjct: 3926 HWVFLANCHLSLSWMPNLDKLVEQLQVEDPHPS-FRLWLSSIPHPDFPISILQVSIKMTT 3984
Query: 218 ETTESLLKALRTLMSL 265
E + L + L L
Sbjct: 3985 EPPKGLKANMTRLYQL 4000
>AK128517-1|BAC87476.1| 901|Homo sapiens protein ( Homo sapiens cDNA
FLJ46675 fis, clone TRACH3009701, weakly similar to Homo
sapiens dynein, axonemal, heavy polypeptide 9 (DNAH9). ).
Length = 901
Score = 31.5 bits (68), Expect = 2.2
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 44 YWHFLSKYHSSSSW*PK--RKVAELKLRQPNPSPLKMSLKKQKFQNKPKRTMAYRIKLSM 217
+W FL+ H S SW P + V +L++ P+PS ++ L + P + IK++
Sbjct: 827 HWVFLANCHLSLSWMPNLDKLVEQLQVEDPHPS-FRLWLSSIPHPDFPISILQVSIKMTT 885
Query: 218 ETTESL 235
E + L
Sbjct: 886 EPPKGL 891
>BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 30.7 bits (66), Expect = 3.9
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 394 EKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAIVEFKNKDSLEKA-LSEHGAVVEGHA 570
EKLKELF ++G +VK ++ + + V ++ ++ +KA L HG ++G
Sbjct: 213 EKLKELFCEYGPTESVK----VIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKV 268
Query: 571 LSV 579
L V
Sbjct: 269 LYV 271
>AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 218
Score = 30.7 bits (66), Expect = 3.9
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 394 EKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAIVEFKNKDSLEKA-LSEHGAVVEGHA 570
EKLKELF ++G +VK ++ + + V ++ ++ +KA L HG ++G
Sbjct: 49 EKLKELFCEYGPTESVK----VIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKV 104
Query: 571 LSV 579
L V
Sbjct: 105 LYV 107
>AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 30.7 bits (66), Expect = 3.9
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 394 EKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAIVEFKNKDSLEKA-LSEHGAVVEGHA 570
EKLKELF ++G +VK ++ + + V ++ ++ +KA L HG ++G
Sbjct: 213 EKLKELFCEYGPTESVK----VIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKV 268
Query: 571 LSV 579
L V
Sbjct: 269 LYV 271
>AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein
protein.
Length = 367
Score = 30.7 bits (66), Expect = 3.9
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 394 EKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAIVEFKNKDSLEKA-LSEHGAVVEGHA 570
EKLKELF ++G +VK ++ + + V ++ ++ +KA L HG ++G
Sbjct: 198 EKLKELFCEYGPTESVK----VIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKV 253
Query: 571 LSV 579
L V
Sbjct: 254 LYV 256
>AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein
cytoplasmic 5 protein.
Length = 382
Score = 30.7 bits (66), Expect = 3.9
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 394 EKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAIVEFKNKDSLEKA-LSEHGAVVEGHA 570
EKLKELF ++G +VK ++ + + V ++ ++ +KA L HG ++G
Sbjct: 213 EKLKELFCEYGPTESVK----VIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKV 268
Query: 571 LSV 579
L V
Sbjct: 269 LYV 271
>Y11289-1|CAA72157.1| 471|Homo sapiens p54nrb protein.
Length = 471
Score = 29.9 bits (64), Expect = 6.8
Identities = 24/63 (38%), Positives = 32/63 (50%)
Frame = +1
Query: 349 LLVENLPSSYLFDYQEKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAIVEFKNKDSLE 528
L V NLP + E L+E FS G+ V+R +IV + P+ IVEF K +
Sbjct: 150 LTVRNLPQ---YVSNELLEEAFSVFGQ---VERAVVIVDD-RGRPSGKGIVEFSGKPAAR 202
Query: 529 KAL 537
KAL
Sbjct: 203 KAL 205
>U89867-1|AAC51852.1| 471|Homo sapiens nuclear matrix protein 55
protein.
Length = 471
Score = 29.9 bits (64), Expect = 6.8
Identities = 24/63 (38%), Positives = 32/63 (50%)
Frame = +1
Query: 349 LLVENLPSSYLFDYQEKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAIVEFKNKDSLE 528
L V NLP + E L+E FS G+ V+R +IV + P+ IVEF K +
Sbjct: 150 LTVRNLPQ---YVSNELLEEAFSVFGQ---VERAVVIVDD-RGRPSGKGIVEFSGKPAAR 202
Query: 529 KAL 537
KAL
Sbjct: 203 KAL 205
>U02493-1|AAA03427.1| 471|Homo sapiens 54 kDa protein protein.
Length = 471
Score = 29.9 bits (64), Expect = 6.8
Identities = 24/63 (38%), Positives = 32/63 (50%)
Frame = +1
Query: 349 LLVENLPSSYLFDYQEKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAIVEFKNKDSLE 528
L V NLP + E L+E FS G+ V+R +IV + P+ IVEF K +
Sbjct: 150 LTVRNLPQ---YVSNELLEEAFSVFGQ---VERAVVIVDD-RGRPSGKGIVEFSGKPAAR 202
Query: 529 KAL 537
KAL
Sbjct: 203 KAL 205
>CR456761-1|CAG33042.1| 471|Homo sapiens NONO protein.
Length = 471
Score = 29.9 bits (64), Expect = 6.8
Identities = 24/63 (38%), Positives = 32/63 (50%)
Frame = +1
Query: 349 LLVENLPSSYLFDYQEKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAIVEFKNKDSLE 528
L V NLP + E L+E FS G+ V+R +IV + P+ IVEF K +
Sbjct: 150 LTVRNLPQ---YVSNELLEEAFSVFGQ---VERAVVIVDD-RGRPSGKGIVEFSGKPAAR 202
Query: 529 KAL 537
KAL
Sbjct: 203 KAL 205
>BC069639-1|AAH69639.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 29.9 bits (64), Expect = 6.8
Identities = 24/63 (38%), Positives = 32/63 (50%)
Frame = +1
Query: 349 LLVENLPSSYLFDYQEKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAIVEFKNKDSLE 528
L V NLP + E L+E FS G+ V+R +IV + P+ IVEF K +
Sbjct: 150 LTVRNLPQ---YVSNELLEEAFSVFGQ---VERAVVIVDD-RGRPSGKGIVEFSGKPAAR 202
Query: 529 KAL 537
KAL
Sbjct: 203 KAL 205
>BC069616-1|AAH69616.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 29.9 bits (64), Expect = 6.8
Identities = 24/63 (38%), Positives = 32/63 (50%)
Frame = +1
Query: 349 LLVENLPSSYLFDYQEKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAIVEFKNKDSLE 528
L V NLP + E L+E FS G+ V+R +IV + P+ IVEF K +
Sbjct: 150 LTVRNLPQ---YVSNELLEEAFSVFGQ---VERAVVIVDD-RGRPSGKGIVEFSGKPAAR 202
Query: 529 KAL 537
KAL
Sbjct: 203 KAL 205
>BC028299-1|AAH28299.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 29.9 bits (64), Expect = 6.8
Identities = 24/63 (38%), Positives = 32/63 (50%)
Frame = +1
Query: 349 LLVENLPSSYLFDYQEKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAIVEFKNKDSLE 528
L V NLP + E L+E FS G+ V+R +IV + P+ IVEF K +
Sbjct: 150 LTVRNLPQ---YVSNELLEEAFSVFGQ---VERAVVIVDD-RGRPSGKGIVEFSGKPAAR 202
Query: 529 KAL 537
KAL
Sbjct: 203 KAL 205
>BC012141-1|AAH12141.1| 471|Homo sapiens NONO protein protein.
Length = 471
Score = 29.9 bits (64), Expect = 6.8
Identities = 24/63 (38%), Positives = 32/63 (50%)
Frame = +1
Query: 349 LLVENLPSSYLFDYQEKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAIVEFKNKDSLE 528
L V NLP + E L+E FS G+ V+R +IV + P+ IVEF K +
Sbjct: 150 LTVRNLPQ---YVSNELLEEAFSVFGQ---VERAVVIVDD-RGRPSGKGIVEFSGKPAAR 202
Query: 529 KAL 537
KAL
Sbjct: 203 KAL 205
>BC003129-1|AAH03129.1| 471|Homo sapiens NONO protein protein.
Length = 471
Score = 29.9 bits (64), Expect = 6.8
Identities = 24/63 (38%), Positives = 32/63 (50%)
Frame = +1
Query: 349 LLVENLPSSYLFDYQEKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAIVEFKNKDSLE 528
L V NLP + E L+E FS G+ V+R +IV + P+ IVEF K +
Sbjct: 150 LTVRNLPQ---YVSNELLEEAFSVFGQ---VERAVVIVDD-RGRPSGKGIVEFSGKPAAR 202
Query: 529 KAL 537
KAL
Sbjct: 203 KAL 205
>BC002364-1|AAH02364.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 29.9 bits (64), Expect = 6.8
Identities = 24/63 (38%), Positives = 32/63 (50%)
Frame = +1
Query: 349 LLVENLPSSYLFDYQEKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAIVEFKNKDSLE 528
L V NLP + E L+E FS G+ V+R +IV + P+ IVEF K +
Sbjct: 150 LTVRNLPQ---YVSNELLEEAFSVFGQ---VERAVVIVDD-RGRPSGKGIVEFSGKPAAR 202
Query: 529 KAL 537
KAL
Sbjct: 203 KAL 205
>AK127271-1|BAC86910.1| 1091|Homo sapiens protein ( Homo sapiens
cDNA FLJ45338 fis, clone BRHIP3008082. ).
Length = 1091
Score = 29.9 bits (64), Expect = 6.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 187 NNGVSDQVEHGDDGIAAEGAENADESTEGDQNQENP 294
N G S +V H DD + E E+ D+ + D +E P
Sbjct: 72 NTGSSSEVVHLDDAFSEEEEEDEDKVEDEDATEERP 107
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,191,521
Number of Sequences: 237096
Number of extensions: 996649
Number of successful extensions: 3197
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3197
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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