Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21b12
         (581 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   3.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   5.1  
S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor prot...    21   8.9  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    21   8.9  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 214 HGDDGIAAEGAENADESTEGDQNQEN 291
           H D  +  E    A ++T+G  NQ+N
Sbjct: 166 HLDSRVIQEAQNIAIQNTQGKNNQQN 191


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 247 ENADESTEGDQNQENPDG 300
           E AD+  + ++N+E  DG
Sbjct: 275 EGADDRDDDEENEEEEDG 292


>S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor
           protein.
          Length = 85

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 225 VVSMLNLIRYAIVLFGL 175
           V S++ LI YA++LF +
Sbjct: 21  VSSLIILISYALILFNI 37


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = +2

Query: 176 KPKRTMAYRIKLSMETTESLLKALRTLMSLRRAIRIKKIL 295
           +PK  +     L M+T   +++ L+ ++ +R   RI  +L
Sbjct: 32  RPKPLLKKEYPLVMDTKLKIIEILQFILDVRLDYRISCLL 71


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,702
Number of Sequences: 438
Number of extensions: 2143
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)