Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21a11
         (349 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT012319-1|AAS77444.1|  306|Drosophila melanogaster AT29374p pro...    27   8.6  
AE013599-2084|AAM70978.1|  368|Drosophila melanogaster CG30466-P...    27   8.6  

>BT012319-1|AAS77444.1|  306|Drosophila melanogaster AT29374p
           protein.
          Length = 306

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = -1

Query: 346 FFYLENWIHLYCTKKSIRRTIRLIIT-KMKSRVVDLYNIYYIN 221
           F +LEN    YC+K ++   I+++ T K+KS  + +++I  I+
Sbjct: 53  FEFLENLTVSYCSKFNVTNLIQILKTRKIKSLKLGIFDIDQIS 95


>AE013599-2084|AAM70978.1|  368|Drosophila melanogaster CG30466-PA
           protein.
          Length = 368

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = -1

Query: 346 FFYLENWIHLYCTKKSIRRTIRLIIT-KMKSRVVDLYNIYYIN 221
           F +LEN    YC+K ++   I+++ T K+KS  + +++I  I+
Sbjct: 151 FEFLENLTVSYCSKFNVTNLIQILKTRKIKSLKLGIFDIDQIS 193


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,400,118
Number of Sequences: 53049
Number of extensions: 141735
Number of successful extensions: 154
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 817309116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)