Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21a07
         (410 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   2.5  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   5.7  
AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    22   7.6  

>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +1

Query: 43   LIKNYFKHNDALFCSNMLRNWSTSIPEGQENWKTGVKGHLTRKKYSHKKFE 195
            L+K YF+  +  F  NM + +  ++        TG+  H + K  +  KFE
Sbjct: 1060 LVKKYFEDFEDGFAYNMTKFYQQNVVTMAFPLATGLPFHYSLKTPTLMKFE 1110


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +3

Query: 165 AKKVFTQKVRGYVVNTLWNLTMKTLVNTQVSNI 263
           +KKV       Y +  +W   ++ LV  QV+ I
Sbjct: 116 SKKVAVVATGSYPIQRVWGSELRGLVAAQVAGI 148


>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +2

Query: 104 GVHQFPKDKKIGRLGLKAI*REKSIHTKS 190
           GVH   K  + GRLG+ AI    S+ TKS
Sbjct: 160 GVHNLYKMFREGRLGMPAINVNDSV-TKS 187


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 406,584
Number of Sequences: 2352
Number of extensions: 8690
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33349914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)