Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc21a07
         (410 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1481|AAF54781.2| 1169|Drosophila melanogaster CG10042-P...    32   0.34 
AY119654-1|AAM50308.1|  574|Drosophila melanogaster RE74287p pro...    30   1.4  
AE013599-653|AAF59087.2|  574|Drosophila melanogaster CG8695-PA ...    30   1.4  
V00204-3|CAA23493.1|  505|Drosophila melanogaster protein L prot...    29   3.2  
AE013599-654|AAF59086.1|  579|Drosophila melanogaster CG8693-PA ...    28   4.2  
BT022206-1|AAY51600.2|  762|Drosophila melanogaster IP01025p pro...    27   7.3  
AE014134-3005|AAF53730.2|  716|Drosophila melanogaster CG10431-P...    27   9.7  

>AE014297-1481|AAF54781.2| 1169|Drosophila melanogaster CG10042-PB,
           isoform B protein.
          Length = 1169

 Score = 31.9 bits (69), Expect = 0.34
 Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
 Frame = +2

Query: 110 HQFPKDKKIGRLGLK--AI*REKSIHTKSSRLCRKHFVESDYENISKYTGVKH*HKYLKK 283
           H FP D  I  + +K   I  E+ I TKS  +C +HF   D+  I          KYL K
Sbjct: 25  HSFPLDPIIRAIWIKNSRISLERQI-TKSVLVCSRHFRRLDFNTIRN-------GKYLLK 76

Query: 284 GAV-PSIFSWNMKPVSE 331
             V P++F W     +E
Sbjct: 77  PRVFPTVFPWGKMDTAE 93


>AY119654-1|AAM50308.1|  574|Drosophila melanogaster RE74287p
           protein.
          Length = 574

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 28  FVLEFLIKNYFKHNDALFCSNMLRNWSTSIPEGQ-ENWKTG 147
           F  E L K  +  +DA   S ++ NW  ++PEGQ  NW  G
Sbjct: 317 FNFELLAKISYS-SDAYHYSELIHNWLDNMPEGQVANWVFG 356


>AE013599-653|AAF59087.2|  574|Drosophila melanogaster CG8695-PA
           protein.
          Length = 574

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 28  FVLEFLIKNYFKHNDALFCSNMLRNWSTSIPEGQ-ENWKTG 147
           F  E L K  +  +DA   S ++ NW  ++PEGQ  NW  G
Sbjct: 317 FNFELLAKISYS-SDAYHYSELIHNWLDNMPEGQVANWVFG 356


>V00204-3|CAA23493.1|  505|Drosophila melanogaster protein L
           protein.
          Length = 505

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +1

Query: 67  NDALFCSNMLRNWSTSIPEGQ-ENWKTG 147
           +DA   S ++ NW  ++PEGQ  NW  G
Sbjct: 329 SDAYHYSELIHNWLDNMPEGQVANWVFG 356


>AE013599-654|AAF59086.1|  579|Drosophila melanogaster CG8693-PA
           protein.
          Length = 579

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +1

Query: 43  LIKNYFKHNDALFCSNMLRNWSTSIPEGQE-NWKTG 147
           LI N    +DA     ++ NW   +PEG+  NW  G
Sbjct: 323 LISNLHYDSDAYHYEYLINNWLNLMPEGKSANWVIG 358


>BT022206-1|AAY51600.2|  762|Drosophila melanogaster IP01025p
           protein.
          Length = 762

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
 Frame = +2

Query: 101 IGVHQFPKDKKIGRLGLKAI*REKS--IHTKSSRLCRKHFVESDYENISKYTGVKH*HKY 274
           I  H+FP  +K      K   +  +  + +K S LC +HF + D+ N S         K 
Sbjct: 20  ISFHRFPFKRKDLLQKWKEFTQRSAQWMPSKWSALCSRHFGDEDF-NCSNN------RKT 72

Query: 275 LKKGAVPSI 301
           LKK AVPSI
Sbjct: 73  LKKNAVPSI 81


>AE014134-3005|AAF53730.2|  716|Drosophila melanogaster CG10431-PA
           protein.
          Length = 716

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 18/40 (45%), Positives = 22/40 (55%)
 Frame = +2

Query: 182 TKSSRLCRKHFVESDYENISKYTGVKH*HKYLKKGAVPSI 301
           +K S LC +HF + D+ N S         K LKK AVPSI
Sbjct: 3   SKWSALCSRHFGDEDF-NCSNN------RKTLKKNAVPSI 35


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,324,290
Number of Sequences: 53049
Number of extensions: 332000
Number of successful extensions: 709
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1209331668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)