Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20p24
         (513 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0225 + 23745404-23747788                                         30   0.95 
06_01_0505 + 3639867-3640301,3640386-3640792,3641024-3641609,364...    27   8.8  

>04_04_0225 + 23745404-23747788
          Length = 794

 Score = 30.3 bits (65), Expect = 0.95
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +1

Query: 358 GTEVNINSEDTLNLVHSY-RATLLHRDILWQYYMLKRELETREWE 489
           GTE+ I S    ++V+ Y RATL    +  QY   K+E  TR W+
Sbjct: 230 GTEITITSTIMGSMVNYYQRATLDPDGVFRQYVYPKKEAVTRGWK 274


>06_01_0505 +
           3639867-3640301,3640386-3640792,3641024-3641609,
           3642185-3642244
          Length = 495

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 505 APCPAAPTLAFPTHVSAYNTATECHDVVV 419
           +P PA P+ +  T ++A   A  CHD ++
Sbjct: 8   SPFPALPSSSSSTTIAASTAARRCHDALL 36


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,326,078
Number of Sequences: 37544
Number of extensions: 190412
Number of successful extensions: 310
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 310
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)