Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20p05
(676 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U54559-1|AAD03465.1| 352|Homo sapiens translation initiation fa... 227 4e-59
CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein. 227 4e-59
BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation ... 227 4e-59
BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation ... 227 4e-59
AK222520-1|BAD96240.1| 352|Homo sapiens eukaryotic translation ... 227 4e-59
AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation ... 225 1e-58
AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation ... 225 1e-58
BC090880-1|AAH90880.1| 349|Homo sapiens EIF3H protein protein. 215 1e-55
AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein. 47 7e-05
U94855-1|AAD03467.1| 357|Homo sapiens translation initiation fa... 43 9e-04
D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 / ... 43 9e-04
CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein. 43 9e-04
BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation ... 43 9e-04
BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome, ma... 43 9e-04
BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation ... 43 9e-04
BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein. 43 9e-04
AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens ... 43 9e-04
AK126225-1|BAC86496.1| 139|Homo sapiens protein ( Homo sapiens ... 35 0.23
DQ323994-1|ABC88596.1| 150|Homo sapiens SFPQ protein. 30 6.5
AK123582-1|BAC85651.1| 165|Homo sapiens mRNA. protein. 30 6.5
AK095331-1|BAC04532.1| 151|Homo sapiens protein ( Homo sapiens ... 30 6.5
>U54559-1|AAD03465.1| 352|Homo sapiens translation initiation
factor eIF3 p40 subunit protein.
Length = 352
Score = 227 bits (554), Expect = 4e-59
Identities = 113/222 (50%), Positives = 156/222 (70%), Gaps = 4/222 (1%)
Frame = +3
Query: 21 ASRAGSAR-RAPENEATIQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLE 197
A AG + + ++ ++ VQ DGL V+KI+KH EE EV QG LLGLVVE+RLE
Sbjct: 19 AGAAGKGKGKGGSGDSAVKQVQIDGLVVLKIIKHYQEEG-QGTEVVQGVLLGLVVEDRLE 77
Query: 198 ITNCFPFPKH---DDTMDEEEYQLDMMRRLRRVNVDHFHVGWYQSADVGNFLSLSLLESQ 368
ITNCFPFP+H D DE +YQ++MMR LR VN+DH HVGWYQS G+F++ +LL+SQ
Sbjct: 78 ITNCFPFPQHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVTRALLDSQ 137
Query: 369 YHYQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQAIAMYKEGDYTPEALRNLKIGYENL 548
+ YQ +IEESVV+IYD K+A+G L+LKAYRLTP+ + + KE D++PEAL+ I +E +
Sbjct: 138 FSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALKKANITFEYM 197
Query: 549 FIEVPIVIRNSPLTNIMISELTEMIPEEEGSKFLDLGTASVL 674
F EVPIVI+NS L N+++ EL + + + L L +++ L
Sbjct: 198 FEEVPIVIKNSHLINVLMWELEKKSAVADKHELLSLASSNHL 239
>CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein.
Length = 352
Score = 227 bits (554), Expect = 4e-59
Identities = 113/222 (50%), Positives = 156/222 (70%), Gaps = 4/222 (1%)
Frame = +3
Query: 21 ASRAGSAR-RAPENEATIQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLE 197
A AG + + ++ ++ VQ DGL V+KI+KH EE EV QG LLGLVVE+RLE
Sbjct: 19 AGAAGKGKGKGGSGDSAVKQVQIDGLVVLKIIKHYQEEG-QGTEVVQGVLLGLVVEDRLE 77
Query: 198 ITNCFPFPKH---DDTMDEEEYQLDMMRRLRRVNVDHFHVGWYQSADVGNFLSLSLLESQ 368
ITNCFPFP+H D DE +YQ++MMR LR VN+DH HVGWYQS G+F++ +LL+SQ
Sbjct: 78 ITNCFPFPQHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVTRALLDSQ 137
Query: 369 YHYQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQAIAMYKEGDYTPEALRNLKIGYENL 548
+ YQ +IEESVV+IYD K+A+G L+LKAYRLTP+ + + KE D++PEAL+ I +E +
Sbjct: 138 FSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALKKANITFEYM 197
Query: 549 FIEVPIVIRNSPLTNIMISELTEMIPEEEGSKFLDLGTASVL 674
F EVPIVI+NS L N+++ EL + + + L L +++ L
Sbjct: 198 FEEVPIVIKNSHLINVLMWELEKKSAVADKHELLSLASSNHL 239
>BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa protein.
Length = 352
Score = 227 bits (554), Expect = 4e-59
Identities = 113/222 (50%), Positives = 156/222 (70%), Gaps = 4/222 (1%)
Frame = +3
Query: 21 ASRAGSAR-RAPENEATIQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLE 197
A AG + + ++ ++ VQ DGL V+KI+KH EE EV QG LLGLVVE+RLE
Sbjct: 19 AGAAGKGKGKGGSGDSAVKQVQIDGLVVLKIIKHYQEEG-QGTEVVQGVLLGLVVEDRLE 77
Query: 198 ITNCFPFPKH---DDTMDEEEYQLDMMRRLRRVNVDHFHVGWYQSADVGNFLSLSLLESQ 368
ITNCFPFP+H D DE +YQ++MMR LR VN+DH HVGWYQS G+F++ +LL+SQ
Sbjct: 78 ITNCFPFPQHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVTRALLDSQ 137
Query: 369 YHYQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQAIAMYKEGDYTPEALRNLKIGYENL 548
+ YQ +IEESVV+IYD K+A+G L+LKAYRLTP+ + + KE D++PEAL+ I +E +
Sbjct: 138 FSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALKKANITFEYM 197
Query: 549 FIEVPIVIRNSPLTNIMISELTEMIPEEEGSKFLDLGTASVL 674
F EVPIVI+NS L N+++ EL + + + L L +++ L
Sbjct: 198 FEEVPIVIKNSHLINVLMWELEKKSAVADKHELLSLASSNHL 239
>BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa protein.
Length = 352
Score = 227 bits (554), Expect = 4e-59
Identities = 113/222 (50%), Positives = 156/222 (70%), Gaps = 4/222 (1%)
Frame = +3
Query: 21 ASRAGSAR-RAPENEATIQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLE 197
A AG + + ++ ++ VQ DGL V+KI+KH EE EV QG LLGLVVE+RLE
Sbjct: 19 AGAAGKGKGKGGSGDSAVKQVQIDGLVVLKIIKHYQEEG-QGTEVVQGVLLGLVVEDRLE 77
Query: 198 ITNCFPFPKH---DDTMDEEEYQLDMMRRLRRVNVDHFHVGWYQSADVGNFLSLSLLESQ 368
ITNCFPFP+H D DE +YQ++MMR LR VN+DH HVGWYQS G+F++ +LL+SQ
Sbjct: 78 ITNCFPFPQHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVTRALLDSQ 137
Query: 369 YHYQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQAIAMYKEGDYTPEALRNLKIGYENL 548
+ YQ +IEESVV+IYD K+A+G L+LKAYRLTP+ + + KE D++PEAL+ I +E +
Sbjct: 138 FSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALKKANITFEYM 197
Query: 549 FIEVPIVIRNSPLTNIMISELTEMIPEEEGSKFLDLGTASVL 674
F EVPIVI+NS L N+++ EL + + + L L +++ L
Sbjct: 198 FEEVPIVIKNSHLINVLMWELEKKSAVADKHELLSLASSNHL 239
>AK222520-1|BAD96240.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa variant
protein.
Length = 352
Score = 227 bits (554), Expect = 4e-59
Identities = 113/222 (50%), Positives = 156/222 (70%), Gaps = 4/222 (1%)
Frame = +3
Query: 21 ASRAGSAR-RAPENEATIQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLE 197
A AG + + ++ ++ VQ DGL V+KI+KH EE EV QG LLGLVVE+RLE
Sbjct: 19 AGAAGKGKGKGGSGDSAVKQVQIDGLVVLKIIKHYQEEG-QGTEVVQGVLLGLVVEDRLE 77
Query: 198 ITNCFPFPKH---DDTMDEEEYQLDMMRRLRRVNVDHFHVGWYQSADVGNFLSLSLLESQ 368
ITNCFPFP+H D DE +YQ++MMR LR VN+DH HVGWYQS G+F++ +LL+SQ
Sbjct: 78 ITNCFPFPQHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVTRALLDSQ 137
Query: 369 YHYQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQAIAMYKEGDYTPEALRNLKIGYENL 548
+ YQ +IEESVV+IYD K+A+G L+LKAYRLTP+ + + KE D++PEAL+ I +E +
Sbjct: 138 FSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALKKANITFEYM 197
Query: 549 FIEVPIVIRNSPLTNIMISELTEMIPEEEGSKFLDLGTASVL 674
F EVPIVI+NS L N+++ EL + + + L L +++ L
Sbjct: 198 FEEVPIVIKNSHLINVLMWELEKKSAVADKHELLSLASSNHL 239
>AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation
factor eIF3 p40 subunit protein.
Length = 352
Score = 225 bits (550), Expect = 1e-58
Identities = 112/222 (50%), Positives = 156/222 (70%), Gaps = 4/222 (1%)
Frame = +3
Query: 21 ASRAGSAR-RAPENEATIQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLE 197
A AG + + ++ ++ VQ DGL V+KI+KH EE EV QG LLGLVV++RLE
Sbjct: 19 AGAAGKGKGKGGSGDSAVKQVQIDGLVVLKIIKHYQEEG-QGTEVVQGVLLGLVVKDRLE 77
Query: 198 ITNCFPFPKH---DDTMDEEEYQLDMMRRLRRVNVDHFHVGWYQSADVGNFLSLSLLESQ 368
ITNCFPFP+H D DE +YQ++MMR LR VN+DH HVGWYQS G+F++ +LL+SQ
Sbjct: 78 ITNCFPFPQHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVTRALLDSQ 137
Query: 369 YHYQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQAIAMYKEGDYTPEALRNLKIGYENL 548
+ YQ +IEESVV+IYD K+A+G L+LKAYRLTP+ + + KE D++PEAL+ I +E +
Sbjct: 138 FSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALKKANITFEYM 197
Query: 549 FIEVPIVIRNSPLTNIMISELTEMIPEEEGSKFLDLGTASVL 674
F EVPIVI+NS L N+++ EL + + + L L +++ L
Sbjct: 198 FEEVPIVIKNSHLINVLMWELEKKSAVADKHELLSLASSNHL 239
>AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa variant
protein.
Length = 352
Score = 225 bits (549), Expect = 1e-58
Identities = 113/222 (50%), Positives = 155/222 (69%), Gaps = 4/222 (1%)
Frame = +3
Query: 21 ASRAGSAR-RAPENEATIQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLE 197
A AG + + ++ ++ VQ DGL V+KI+KH EE EV QG LLGLVVE+RLE
Sbjct: 19 AGAAGKGKGKGGSGDSAVKQVQIDGLVVLKIIKHYQEEG-QGTEVVQGVLLGLVVEDRLE 77
Query: 198 ITNCFPFPKH---DDTMDEEEYQLDMMRRLRRVNVDHFHVGWYQSADVGNFLSLSLLESQ 368
ITNCFPFP+H D DE +YQ++MMR LR VN+DH HVGWYQS G+F++ +LL+SQ
Sbjct: 78 ITNCFPFPQHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVTRALLDSQ 137
Query: 369 YHYQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQAIAMYKEGDYTPEALRNLKIGYENL 548
+ YQ +IEESVV+IYD K+A+G L+LKAYRLTP+ + + KE D++PEAL+ I E +
Sbjct: 138 FSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALKKANITSEYM 197
Query: 549 FIEVPIVIRNSPLTNIMISELTEMIPEEEGSKFLDLGTASVL 674
F EVPIVI+NS L N+++ EL + + + L L +++ L
Sbjct: 198 FEEVPIVIKNSHLINVLMWELEKKSAVADKHELLSLASSNHL 239
>BC090880-1|AAH90880.1| 349|Homo sapiens EIF3H protein protein.
Length = 349
Score = 215 bits (525), Expect = 1e-55
Identities = 111/222 (50%), Positives = 152/222 (68%), Gaps = 4/222 (1%)
Frame = +3
Query: 21 ASRAGSAR-RAPENEATIQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLE 197
A AG + + ++ ++ VQ DGL V K H EE EV QG LLGLVVE+RLE
Sbjct: 19 AGAAGKGKGKGGSGDSAVKQVQIDGLVVFK---HYQEEG-QGTEVVQGVLLGLVVEDRLE 74
Query: 198 ITNCFPFPKH---DDTMDEEEYQLDMMRRLRRVNVDHFHVGWYQSADVGNFLSLSLLESQ 368
ITNCFPFP+H D DE +YQ++MMR LR VN+DH HVGWYQS G+F++ +LL+SQ
Sbjct: 75 ITNCFPFPQHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVTRALLDSQ 134
Query: 369 YHYQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQAIAMYKEGDYTPEALRNLKIGYENL 548
+ YQ +IEESVV+IYD K+A+G L+LKAYRLTP+ + + KE D++PEAL+ I +E +
Sbjct: 135 FSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALKKANITFEYM 194
Query: 549 FIEVPIVIRNSPLTNIMISELTEMIPEEEGSKFLDLGTASVL 674
F EVPIVI+NS L N+++ EL + + + L L +++ L
Sbjct: 195 FEEVPIVIKNSHLINVLMWELEKKSAVADKHELLSLASSNHL 236
>AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein.
Length = 348
Score = 46.8 bits (106), Expect = 7e-05
Identities = 34/141 (24%), Positives = 68/141 (48%), Gaps = 2/141 (1%)
Frame = +3
Query: 159 GALLGLVVENRLEITNCF--PFPKHDDTMDEEEYQLDMMRRLRRVNVDHFHVGWYQSADV 332
G LLG V ++ +E+TNCF + + D+ + + E+ +M ++V+ + +GWY +
Sbjct: 108 GTLLGTVNKHSVEVTNCFSVSYNESDEVVVDMEFAKNMYELHKKVSPNELILGWYAAGH- 166
Query: 333 GNFLSLSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQAIAMYKEGDYTPE 512
+ S+L +Y Y + + DT G +++KAY T + G +TP
Sbjct: 167 -DITEHSVLIHEY-YSREAPNPIHLTVDTSLQ-NGHMSIKAYVSTLMGVPGRTVGVFTPL 223
Query: 513 ALRNLKIGYENLFIEVPIVIR 575
++ Y+ I V ++++
Sbjct: 224 TVKYAY--YDTECIRVDLIMK 242
>U94855-1|AAD03467.1| 357|Homo sapiens translation initiation
factor 3 47 kDa subunit protein.
Length = 357
Score = 43.2 bits (97), Expect = 9e-04
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Frame = +3
Query: 159 GALLGLVVENRLEITNCFPFPKHDDTMDE----EEYQLDMMRRLRRVNVDHFHVGWYQSA 326
G LLG V ++ +E+TNCF P H+++ DE E+ +M ++V+ + +GWY +
Sbjct: 118 GTLLGTVDKHSVEVTNCFSVP-HNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATG 176
Query: 327 DVGNFLSLSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAY 458
+ S+L +Y Y + + DT G +++KAY
Sbjct: 177 H--DITEHSVLIHEY-YSREAPNPIHLTVDTSLQ-NGRMSIKAY 216
>D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 /
Mov34 protein protein.
Length = 324
Score = 43.2 bits (97), Expect = 9e-04
Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 7/140 (5%)
Frame = +3
Query: 60 EATIQYVQCDGLAVMKIVKHCHE-ESCSNMEVAQGALLGLVVENRLEITNCFPFPKHDDT 236
E +Q V L ++ +V H + N + G LLG + L+++N F P +D
Sbjct: 3 ELAVQKVVVHPLVLLSVVDHFNRIVKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDD 62
Query: 237 MDEEEYQLD------MMRRLRRVNVDHFHVGWYQSADVGNFLSLSLLESQYHYQTSIEES 398
D+ + LD M ++VN VGWY + + +++ E Y S
Sbjct: 63 KDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRY---CPNS 119
Query: 399 VVVIYDTKKSARGFLTLKAY 458
V+VI D K G L +AY
Sbjct: 120 VLVIIDVKPKDLG-LPTEAY 138
>CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein.
Length = 357
Score = 43.2 bits (97), Expect = 9e-04
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Frame = +3
Query: 159 GALLGLVVENRLEITNCFPFPKHDDTMDE----EEYQLDMMRRLRRVNVDHFHVGWYQSA 326
G LLG V ++ +E+TNCF P H+++ DE E+ +M ++V+ + +GWY +
Sbjct: 118 GTLLGTVDKHSVEVTNCFSVP-HNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATG 176
Query: 327 DVGNFLSLSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAY 458
+ S+L +Y Y + + DT G +++KAY
Sbjct: 177 H--DITEHSVLIHEY-YSREAPNPIHLTVDTSLQ-NGRMSIKAY 216
>BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 43.2 bits (97), Expect = 9e-04
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Frame = +3
Query: 159 GALLGLVVENRLEITNCFPFPKHDDTMDE----EEYQLDMMRRLRRVNVDHFHVGWYQSA 326
G LLG V ++ +E+TNCF P H+++ DE E+ +M ++V+ + +GWY +
Sbjct: 118 GTLLGTVDKHSVEVTNCFSVP-HNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATG 176
Query: 327 DVGNFLSLSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAY 458
+ S+L +Y Y + + DT G +++KAY
Sbjct: 177 H--DITEHSVLIHEY-YSREAPNPIHLTVDTSLQ-NGRMSIKAY 216
>BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog)
protein.
Length = 324
Score = 43.2 bits (97), Expect = 9e-04
Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 7/140 (5%)
Frame = +3
Query: 60 EATIQYVQCDGLAVMKIVKHCHE-ESCSNMEVAQGALLGLVVENRLEITNCFPFPKHDDT 236
E +Q V L ++ +V H + N + G LLG + L+++N F P +D
Sbjct: 3 ELAVQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDD 62
Query: 237 MDEEEYQLD------MMRRLRRVNVDHFHVGWYQSADVGNFLSLSLLESQYHYQTSIEES 398
D+ + LD M ++VN VGWY + + +++ E Y S
Sbjct: 63 KDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRY---CPNS 119
Query: 399 VVVIYDTKKSARGFLTLKAY 458
V+VI D K G L +AY
Sbjct: 120 VLVIIDVKPKDLG-LPTEAY 138
>BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 43.2 bits (97), Expect = 9e-04
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Frame = +3
Query: 159 GALLGLVVENRLEITNCFPFPKHDDTMDE----EEYQLDMMRRLRRVNVDHFHVGWYQSA 326
G LLG V ++ +E+TNCF P H+++ DE E+ +M ++V+ + +GWY +
Sbjct: 118 GTLLGTVDKHSVEVTNCFSVP-HNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATG 176
Query: 327 DVGNFLSLSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAY 458
+ S+L +Y Y + + DT G +++KAY
Sbjct: 177 H--DITEHSVLIHEY-YSREAPNPIHLTVDTSLQ-NGRMSIKAY 216
>BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein.
Length = 326
Score = 43.2 bits (97), Expect = 9e-04
Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 7/140 (5%)
Frame = +3
Query: 60 EATIQYVQCDGLAVMKIVKHCHE-ESCSNMEVAQGALLGLVVENRLEITNCFPFPKHDDT 236
E +Q V L ++ +V H + N + G LLG + L+++N F P +D
Sbjct: 3 ELAVQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDD 62
Query: 237 MDEEEYQLD------MMRRLRRVNVDHFHVGWYQSADVGNFLSLSLLESQYHYQTSIEES 398
D+ + LD M ++VN VGWY + + +++ E Y S
Sbjct: 63 KDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRY---CPNS 119
Query: 399 VVVIYDTKKSARGFLTLKAY 458
V+VI D K G L +AY
Sbjct: 120 VLVIIDVKPKDLG-LPTEAY 138
>AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ38255 fis, clone FCBBF3001020, highly similar to
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 5. ).
Length = 350
Score = 43.2 bits (97), Expect = 9e-04
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Frame = +3
Query: 159 GALLGLVVENRLEITNCFPFPKHDDTMDE----EEYQLDMMRRLRRVNVDHFHVGWYQSA 326
G LLG V ++ +E+TNCF P H+++ DE E+ +M ++V+ + +GWY +
Sbjct: 111 GTLLGTVDKHSVEVTNCFSVP-HNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATG 169
Query: 327 DVGNFLSLSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAY 458
+ S+L +Y Y + + DT G +++KAY
Sbjct: 170 H--DITEHSVLIHEY-YSREAPNPIHLTVDTSLQ-NGRMSIKAY 209
>AK126225-1|BAC86496.1| 139|Homo sapiens protein ( Homo sapiens
cDNA FLJ44237 fis, clone THYMU3007845. ).
Length = 139
Score = 35.1 bits (77), Expect = 0.23
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = -2
Query: 252 IPPHPWCRRALEMGSSW*SPDGSQRPNQGE-LPEPPPCCCMI--LHDSVSL 109
+P C A+ + W +Q G LP PPPCCC++ LH S SL
Sbjct: 3 LPGLTLCSGAVGTSTQWLMAALAQLSRPGRRLPPPPPCCCLVQPLHGSSSL 53
>DQ323994-1|ABC88596.1| 150|Homo sapiens SFPQ protein.
Length = 150
Score = 30.3 bits (65), Expect = 6.5
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = -2
Query: 270 SSCPTGIPPHPWCRRALEMGSSW*SPDGSQRPNQGELPEPPPC 142
S CP G PPHP R+ GS D + P + P P PC
Sbjct: 70 SQCPQGRPPHP-VPRSPRRGSR----DLGKEPGEEAAPWPSPC 107
>AK123582-1|BAC85651.1| 165|Homo sapiens mRNA. protein.
Length = 165
Score = 30.3 bits (65), Expect = 6.5
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = -2
Query: 270 SSCPTGIPPHPWCRRALEMGSSW*SPDGSQRPNQGELPEPPPC 142
S CP G PPHP R+ GS D + P + P P PC
Sbjct: 84 SQCPQGRPPHP-VPRSPRRGSR----DLGKEPGEEAAPWPSPC 121
>AK095331-1|BAC04532.1| 151|Homo sapiens protein ( Homo sapiens
cDNA FLJ38012 fis, clone CTONG2012554. ).
Length = 151
Score = 30.3 bits (65), Expect = 6.5
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = -2
Query: 270 SSCPTGIPPHPWCRRALEMGSSW*SPDGSQRPNQGELPEPPPC 142
S CP G PPHP R+ GS D + P + P P PC
Sbjct: 70 SQCPQGRPPHP-VPRSPRRGSR----DLGKEPGEEAAPWPSPC 107
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,927,433
Number of Sequences: 237096
Number of extensions: 2374098
Number of successful extensions: 6062
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 5649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6028
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -