Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20o12
         (641 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118916-1|AAM50776.1|  356|Drosophila melanogaster LD22010p pro...   254   6e-68
AE014296-815|AAF47877.3|  356|Drosophila melanogaster CG11583-PA...   254   6e-68
BT021467-1|AAX33615.1|  270|Drosophila melanogaster AT12221p pro...    31   1.8  
AY071145-1|AAL48767.1|  520|Drosophila melanogaster RE18068p pro...    31   1.8  
AE014297-1231|AAF54580.2|  520|Drosophila melanogaster CG4674-PA...    31   1.8  
AE014134-91|ABC65866.1|  239|Drosophila melanogaster CG33992-PA ...    31   1.8  
AY051991-1|AAK93415.1| 1010|Drosophila melanogaster LD45758p pro...    30   2.3  
AF520716-1|AAM55245.1| 1010|Drosophila melanogaster MICAL-like p...    30   2.3  
AE014296-2228|AAF49857.2| 1010|Drosophila melanogaster CG11259-P...    30   2.3  
AY060713-1|AAL28261.1|  596|Drosophila melanogaster GH15479p pro...    29   4.1  
AE014296-3503|AAF51694.1|  596|Drosophila melanogaster CG9389-PA...    29   4.1  
AE014134-3513|AAF57219.3|  819|Drosophila melanogaster CG12548-P...    29   5.4  
AE014134-3512|AAF57218.3|  852|Drosophila melanogaster CG12548-P...    29   5.4  
AE014134-2707|AAN10938.1| 2282|Drosophila melanogaster CG31817-P...    29   5.4  
AL138972-11|CAB72294.1| 1212|Drosophila melanogaster EG:BACR25B3...    29   7.1  
AF132186-1|AAD34774.1| 1212|Drosophila melanogaster unknown prot...    29   7.1  
AE014298-417|AAF45793.1| 1212|Drosophila melanogaster CG8590-PA ...    29   7.1  
AE014296-420|AAF47619.2| 1772|Drosophila melanogaster CG13809-PA...    28   9.4  

>AY118916-1|AAM50776.1|  356|Drosophila melanogaster LD22010p
           protein.
          Length = 356

 Score =  254 bits (623), Expect = 6e-68
 Identities = 119/169 (70%), Positives = 136/169 (80%), Gaps = 2/169 (1%)
 Frame = +3

Query: 141 EPVTKDENVPLPPVRMSSDPAPKQVKWINRQRVLVFAMRGINHRHRHLMEDIKKLMPHHK 320
           E V  DEN PLPP R S D  PK+ KW+N+QRVLVF+ RGI+HR RHLM+DIK LMPHH+
Sbjct: 17  EIVPLDENPPLPPQRSSDDVVPKKEKWVNKQRVLVFSARGISHRDRHLMKDIKTLMPHHR 76

Query: 321 TESKMERSKNLYVVNEISEMKNCNKCILFEGRKMRDLYMWISNI--PNGPSAKFLVENIY 494
            ESKMERSK L VVNE+ EMK+CNK +LFEGR+ RDLYMWISN     GPSAKFL+ENI+
Sbjct: 77  PESKMERSKTLSVVNEMCEMKHCNKAMLFEGRRKRDLYMWISNTSGSTGPSAKFLIENIH 136

Query: 495 TMGELKMTGNCLRGSRPLLSFDPQFTKDPHYCLLKELLVQIFGVPNYHP 641
           TM ELKMTGNCLRGSRPLLSFD +F + PH  LLKEL VQ + VPN+HP
Sbjct: 137 TMAELKMTGNCLRGSRPLLSFDSKFDELPHLKLLKELFVQTYSVPNHHP 185


>AE014296-815|AAF47877.3|  356|Drosophila melanogaster CG11583-PA
           protein.
          Length = 356

 Score =  254 bits (623), Expect = 6e-68
 Identities = 119/169 (70%), Positives = 136/169 (80%), Gaps = 2/169 (1%)
 Frame = +3

Query: 141 EPVTKDENVPLPPVRMSSDPAPKQVKWINRQRVLVFAMRGINHRHRHLMEDIKKLMPHHK 320
           E V  DEN PLPP R S D  PK+ KW+N+QRVLVF+ RGI+HR RHLM+DIK LMPHH+
Sbjct: 17  EIVPLDENPPLPPQRSSDDVVPKKEKWVNKQRVLVFSARGISHRDRHLMKDIKTLMPHHR 76

Query: 321 TESKMERSKNLYVVNEISEMKNCNKCILFEGRKMRDLYMWISNI--PNGPSAKFLVENIY 494
            ESKMERSK L VVNE+ EMK+CNK +LFEGR+ RDLYMWISN     GPSAKFL+ENI+
Sbjct: 77  PESKMERSKTLSVVNEMCEMKHCNKAMLFEGRRKRDLYMWISNTSGSTGPSAKFLIENIH 136

Query: 495 TMGELKMTGNCLRGSRPLLSFDPQFTKDPHYCLLKELLVQIFGVPNYHP 641
           TM ELKMTGNCLRGSRPLLSFD +F + PH  LLKEL VQ + VPN+HP
Sbjct: 137 TMAELKMTGNCLRGSRPLLSFDSKFDELPHLKLLKELFVQTYSVPNHHP 185


>BT021467-1|AAX33615.1|  270|Drosophila melanogaster AT12221p
           protein.
          Length = 270

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
 Frame = +3

Query: 90  KAMVKVKKPSKVKQRITEPVTKDENVPLP---PVRMSSDPAPKQVKWINRQRVLVFAMRG 260
           K   K K   K + + T+    +++ P     P +    P  K+++  +R+R +   +R 
Sbjct: 124 KGKGKKKPKDKDEDKNTKDNRSEKDCPCEICCPPKEEDTPLIKEMRRRDRERQVRDYLRQ 183

Query: 261 INHRHRHLMEDIKKLMPHHKTE 326
           + HR     +D+K   PHHK +
Sbjct: 184 MRHRQYMECKDLKYPSPHHKCD 205


>AY071145-1|AAL48767.1|  520|Drosophila melanogaster RE18068p
           protein.
          Length = 520

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +3

Query: 81  IKFKAMVKVKKPSKVKQRITEPVTKDENVPLPPVRMS 191
           IK+K  V +++P    +R T P T  +N+PL P++ S
Sbjct: 122 IKYKMRVLIQRPWTFDERHTIPFTVVKNMPLQPMQRS 158


>AE014297-1231|AAF54580.2|  520|Drosophila melanogaster CG4674-PA
           protein.
          Length = 520

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +3

Query: 81  IKFKAMVKVKKPSKVKQRITEPVTKDENVPLPPVRMS 191
           IK+K  V +++P    +R T P T  +N+PL P++ S
Sbjct: 122 IKYKMRVLIQRPWTFDERHTIPFTVVKNMPLQPMQRS 158


>AE014134-91|ABC65866.1|  239|Drosophila melanogaster CG33992-PA
           protein.
          Length = 239

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
 Frame = +3

Query: 90  KAMVKVKKPSKVKQRITEPVTKDENVPLP---PVRMSSDPAPKQVKWINRQRVLVFAMRG 260
           K   K K   K + + T+    +++ P     P +    P  K+++  +R+R +   +R 
Sbjct: 93  KGKGKKKPKDKDEDKNTKDNRSEKDCPCEICCPPKEEDTPLIKEMRRRDRERQVRDYLRQ 152

Query: 261 INHRHRHLMEDIKKLMPHHKTE 326
           + HR     +D+K   PHHK +
Sbjct: 153 MRHRQYMECKDLKYPSPHHKCD 174


>AY051991-1|AAK93415.1| 1010|Drosophila melanogaster LD45758p
           protein.
          Length = 1010

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +3

Query: 114 PSKVKQRITEPVTKDENVPLPPVRMSSDPAPKQVKWINRQRVLV 245
           P+     IT P+ K    PLPP++   D  P   K  + Q+ L+
Sbjct: 615 PTTSLSSITSPMRKKRQAPLPPIQTDFDSDPGFSKLSDEQKALL 658


>AF520716-1|AAM55245.1| 1010|Drosophila melanogaster MICAL-like
           protein protein.
          Length = 1010

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +3

Query: 114 PSKVKQRITEPVTKDENVPLPPVRMSSDPAPKQVKWINRQRVLV 245
           P+     IT P+ K    PLPP++   D  P   K  + Q+ L+
Sbjct: 615 PTTSLSSITSPMRKKRQAPLPPIQTDFDSDPGFSKLSDEQKALL 658


>AE014296-2228|AAF49857.2| 1010|Drosophila melanogaster CG11259-PA
           protein.
          Length = 1010

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +3

Query: 114 PSKVKQRITEPVTKDENVPLPPVRMSSDPAPKQVKWINRQRVLV 245
           P+     IT P+ K    PLPP++   D  P   K  + Q+ L+
Sbjct: 615 PTTSLSSITSPMRKKRQAPLPPIQTDFDSDPGFSKLSDEQKALL 658


>AY060713-1|AAL28261.1|  596|Drosophila melanogaster GH15479p
           protein.
          Length = 596

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
 Frame = +3

Query: 135 ITEPVTKDENVPLPPVRMSS---DPAPKQVKWIN 227
           I  P  + E+VPLPP  MSS   D +P  V+ IN
Sbjct: 191 IAPPAPRPEDVPLPPPMMSSLPTDGSPDDVQSIN 224


>AE014296-3503|AAF51694.1|  596|Drosophila melanogaster CG9389-PA
           protein.
          Length = 596

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
 Frame = +3

Query: 135 ITEPVTKDENVPLPPVRMSS---DPAPKQVKWIN 227
           I  P  + E+VPLPP  MSS   D +P  V+ IN
Sbjct: 191 IAPPAPRPEDVPLPPPMMSSLPTDGSPDDVQSIN 224


>AE014134-3513|AAF57219.3|  819|Drosophila melanogaster CG12548-PB,
           isoform B protein.
          Length = 819

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 129 QRITEPVTKDENVPLPPVRMSSDPAPKQVKWINR 230
           QR+ EPV++ E VP PP   +  P P   +  +R
Sbjct: 11  QRLPEPVSEHEAVPPPPPTAAGRPRPPTSQLFSR 44


>AE014134-3512|AAF57218.3|  852|Drosophila melanogaster CG12548-PA,
           isoform A protein.
          Length = 852

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 129 QRITEPVTKDENVPLPPVRMSSDPAPKQVKWINR 230
           QR+ EPV++ E VP PP   +  P P   +  +R
Sbjct: 11  QRLPEPVSEHEAVPPPPPTAAGRPRPPTSQLFSR 44


>AE014134-2707|AAN10938.1| 2282|Drosophila melanogaster CG31817-PA
            protein.
          Length = 2282

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
 Frame = +3

Query: 267  HRHRHLMEDIKKL--MPHHKTESKMERSKNLYVVNEISEMKNCNKC 398
            +RHR L  D++K   +P +++  +  +S N Y +++I E + CN C
Sbjct: 1826 YRHRVLFTDLRKCKKIPKNRSRQRSGKSDN-YYIDQI-ENRICNSC 1869


>AL138972-11|CAB72294.1| 1212|Drosophila melanogaster EG:BACR25B3.9
            protein.
          Length = 1212

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 18/106 (16%), Positives = 42/106 (39%)
 Frame = +3

Query: 189  SSDPAPKQVKWINRQRVLVFAMRGINHRHRHLMEDIKKLMPHHKTESKMERSKNLYVVNE 368
            SS+   K   W++R+  ++ ++    H    LMED   +  H+    + + S       +
Sbjct: 760  SSNANAKTDSWVDRELEIILSLIDAEHSLEQLMEDRAVINNHYHLLQQEKTSDPAEAAEQ 819

Query: 369  ISEMKNCNKCILFEGRKMRDLYMWISNIPNGPSAKFLVENIYTMGE 506
               + +  + +     ++ DL   +         + L E + ++GE
Sbjct: 820  ARILASLEEELEMRNAQISDLQQKVCPTDLDSRIRSLAEGVQSLGE 865


>AF132186-1|AAD34774.1| 1212|Drosophila melanogaster unknown protein.
          Length = 1212

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 18/106 (16%), Positives = 42/106 (39%)
 Frame = +3

Query: 189  SSDPAPKQVKWINRQRVLVFAMRGINHRHRHLMEDIKKLMPHHKTESKMERSKNLYVVNE 368
            SS+   K   W++R+  ++ ++    H    LMED   +  H+    + + S       +
Sbjct: 760  SSNANAKTDSWVDRELEIILSLIDAEHSLEQLMEDRAVINNHYHLLQQEKTSDPAEAAEQ 819

Query: 369  ISEMKNCNKCILFEGRKMRDLYMWISNIPNGPSAKFLVENIYTMGE 506
               + +  + +     ++ DL   +         + L E + ++GE
Sbjct: 820  ARILASLEEELEMRNAQISDLQQKVCPTDLDSRIRSLAEGVQSLGE 865


>AE014298-417|AAF45793.1| 1212|Drosophila melanogaster CG8590-PA
            protein.
          Length = 1212

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 18/106 (16%), Positives = 42/106 (39%)
 Frame = +3

Query: 189  SSDPAPKQVKWINRQRVLVFAMRGINHRHRHLMEDIKKLMPHHKTESKMERSKNLYVVNE 368
            SS+   K   W++R+  ++ ++    H    LMED   +  H+    + + S       +
Sbjct: 760  SSNANAKTDSWVDRELEIILSLIDAEHSLEQLMEDRAVINNHYHLLQQEKTSDPAEAAEQ 819

Query: 369  ISEMKNCNKCILFEGRKMRDLYMWISNIPNGPSAKFLVENIYTMGE 506
               + +  + +     ++ DL   +         + L E + ++GE
Sbjct: 820  ARILASLEEELEMRNAQISDLQQKVCPTDLDSRIRSLAEGVQSLGE 865


>AE014296-420|AAF47619.2| 1772|Drosophila melanogaster CG13809-PA
           protein.
          Length = 1772

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -1

Query: 536 SSQTIASHFQFPHSINVFHQKFST 465
           S   IA    FP+ +N+FHQ F+T
Sbjct: 123 SGSIIAGKSPFPNEMNIFHQVFTT 146


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,944,109
Number of Sequences: 53049
Number of extensions: 596984
Number of successful extensions: 1631
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1629
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)