Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20o06
(202 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0316 + 3479574-3482679,3482766-3483127 31 0.13
03_02_0824 + 11556128-11556989,11557515-11559134,11559236-11559825 31 0.13
04_04_0881 + 29055724-29059197 30 0.22
07_01_0113 + 840866-841574,841687-842210,842391-842840,843541-84... 29 0.39
11_06_0091 + 19967390-19969825 29 0.52
01_01_0361 + 2838979-2841745,2841897-2842285 29 0.68
10_01_0105 + 1287423-1289924 28 0.90
01_01_0490 + 3620523-3623403,3623524-3623996 28 0.90
10_01_0318 + 3493913-3496976,3497064-3497392 28 1.2
10_03_0031 + 7214010-7215450,7215534-7216913,7217007-7217386 27 1.6
11_06_0115 + 20288220-20288303,20289223-20289706,20290160-202903... 27 2.1
11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895,361... 27 2.1
12_01_0808 + 7418878-7420476 27 2.8
11_06_0129 - 20397179-20397537,20397749-20400497 27 2.8
11_01_0456 + 3522599-3523921,3524005-3524027,3524097-3525265,352... 27 2.8
10_08_0727 - 20133293-20135701 27 2.8
10_08_0327 + 16797366-16800639,16800979-16801067,16801120-16801593 27 2.8
10_01_0099 - 1202668-1203023,1203097-1206037 27 2.8
05_06_0124 - 25822176-25822633,25822738-25825420 27 2.8
04_04_0584 + 26381220-26381232,26381583-26381594,26381921-263820... 27 2.8
04_03_0396 + 15361501-15361663,15361726-15361806,15361909-15362054 27 2.8
03_02_0482 + 8798931-8799024,8799118-8799253,8799435-8799506,879... 27 2.8
01_07_0167 - 41613834-41613842,41614060-41615056,41615456-416163... 27 2.8
11_03_0171 + 11111534-11113207 26 3.6
07_01_0234 + 1715338-1718233,1718351-1718760 26 3.6
07_01_0024 + 159839-159923,160395-160442,160884-160895,161347-16... 26 3.6
04_04_0442 - 25229186-25229568,25229740-25232671 26 3.6
02_05_0061 + 25506648-25509399,25509564-25509901,25510392-255105... 26 3.6
11_08_0011 + 27612206-27615110,27615211-27615538,27615989-276160... 26 4.8
10_08_0477 - 18188280-18188490,18188572-18188748,18189141-181893... 26 4.8
06_01_0602 - 4342333-4342790,4342899-4345623 26 4.8
03_06_0126 + 31865339-31867943,31868176-31868660 26 4.8
03_02_0132 - 5808606-5808696,5808804-5808875,5809133-5809204,580... 26 4.8
03_01_0314 - 2477593-2480685 26 4.8
02_02_0025 + 6183328-6186127,6186265-6186623 26 4.8
01_06_0355 + 28657833-28660665,28660762-28661126 26 4.8
01_01_0978 + 7738232-7740848,7740929-7741320 26 4.8
12_01_0718 + 6339982-6342981 25 6.4
12_01_0138 - 1069616-1069894,1070056-1070607,1070689-1071046,107... 25 6.4
11_01_0137 - 1137979-1138257,1138419-1138970,1139052-1139409,113... 25 6.4
09_04_0524 + 18321110-18323978,18324098-18324576 25 6.4
08_02_0192 + 14048828-14048873,14048960-14051169 25 6.4
05_03_0209 + 10139857-10140041,10140223-10140294,10140374-101404... 25 6.4
05_01_0493 + 4113869-4116728,4116859-4117370 25 6.4
12_02_1144 + 26449490-26452292,26452401-26452742,26453141-26453160 25 8.4
11_08_0024 + 27747449-27747940,27748141-27750177 25 8.4
11_08_0009 + 27600881-27602592,27602665-27603008,27603159-276038... 25 8.4
11_06_0445 - 23679918-23680282,23680415-23683349 25 8.4
09_03_0127 + 12573429-12574857,12575269-12575903 25 8.4
03_03_0144 + 14826797-14827435,14827561-14827771,14827861-148281... 25 8.4
01_05_0610 - 23636097-23638958 25 8.4
>10_01_0316 + 3479574-3482679,3482766-3483127
Length = 1155
Score = 31.1 bits (67), Expect = 0.13
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +3
Query: 21 CRKLMRIYLNTDTFSGQLPAYL 86
CR L+ +YLN++ F+G +PA++
Sbjct: 334 CRCLIMLYLNSNNFTGSIPAFI 355
>03_02_0824 + 11556128-11556989,11557515-11559134,11559236-11559825
Length = 1023
Score = 31.1 bits (67), Expect = 0.13
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 12 DLGCRKLMRIY-LNTDTFSGQLPAYLTHYVNYPHKNL 119
DLG +++ L+ + FSGQ+PA LT N H NL
Sbjct: 95 DLGSMTSLQLLDLSNNMFSGQIPAELTKLANLGHLNL 131
>04_04_0881 + 29055724-29059197
Length = 1157
Score = 30.3 bits (65), Expect = 0.22
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 18 GCRKLMRIYLNTDTFSGQLPAYL 86
G R+L +YL ++FSGQ+PA L
Sbjct: 414 GLRRLREVYLGGNSFSGQIPASL 436
>07_01_0113 +
840866-841574,841687-842210,842391-842840,843541-843699
Length = 613
Score = 29.5 bits (63), Expect = 0.39
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +3
Query: 24 RKLMRIYLNTDTFSGQLPAYLTHYVNYPHKNLCDQN 131
R L + L+ +TFSG +PA +T+ ++ + +L D N
Sbjct: 340 RDLQILRLSHNTFSGSIPAGITNLLSLQYLDLSDNN 375
>11_06_0091 + 19967390-19969825
Length = 811
Score = 29.1 bits (62), Expect = 0.52
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +3
Query: 18 GCRKLMRIYLNTDTFSGQLPAYLTHYVNYPHKNLCDQNWKRF 143
G RK+ + ++ ++FSG P++L + N + D +W +F
Sbjct: 479 GMRKMSILRISNNSFSGNFPSFLQGWTNL---SFLDLSWNKF 517
>01_01_0361 + 2838979-2841745,2841897-2842285
Length = 1051
Score = 28.7 bits (61), Expect = 0.68
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 21 CRKLMRIYLNTDTFSGQLPAYLTHYVNYPHKNLCDQN 131
C +L ++ ++ ++FSGQLP + + HK D N
Sbjct: 347 CSQLQQLVISDNSFSGQLPNSVVNLSTTLHKLYLDNN 383
>10_01_0105 + 1287423-1289924
Length = 833
Score = 28.3 bits (60), Expect = 0.90
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 39 IYLNTDTFSGQLPAYLTHYVNYPHKNLCDQN 131
++L + F+G +P +TH + NL D N
Sbjct: 550 LHLGHNMFNGDIPVNITHLTQLQYLNLADNN 580
>01_01_0490 + 3620523-3623403,3623524-3623996
Length = 1117
Score = 28.3 bits (60), Expect = 0.90
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 9 PDLG-CRKLMRIYLNTDTFSGQLPAYLTHYVNYPHKNLCDQN 131
P+LG C L IYL + SG +PA L N + L N
Sbjct: 268 PELGRCTSLENIYLYENALSGSIPAQLGGLANLKNLLLWQNN 309
>10_01_0318 + 3493913-3496976,3497064-3497392
Length = 1130
Score = 27.9 bits (59), Expect = 1.2
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3
Query: 21 CRKLMRIYLNTDTFSGQLPAYL 86
CR L +YLN + F+G +P ++
Sbjct: 320 CRSLTMLYLNGNRFTGSIPKFI 341
>10_03_0031 + 7214010-7215450,7215534-7216913,7217007-7217386
Length = 1066
Score = 27.5 bits (58), Expect = 1.6
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 21 CRKLMRIYLNTDTFSGQLPAYL 86
CRKL + +N++ F+G LP YL
Sbjct: 441 CRKLSVLCINSNRFTGILPDYL 462
>11_06_0115 +
20288220-20288303,20289223-20289706,20290160-20290393,
20291811-20292770,20292931-20293404,20293406-20294664
Length = 1164
Score = 27.1 bits (57), Expect = 2.1
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +3
Query: 18 GCRKLMRIYLNTDTFSGQLPAYL 86
GC++LM + L+ F G+LP+++
Sbjct: 190 GCKQLMHLDLSQSKFHGRLPSWI 212
>11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895,
3611984-3612217,3614113-3614138,3614446-3614633,
3615707-3617670,3617938-3618423,3618527-3618894
Length = 2207
Score = 27.1 bits (57), Expect = 2.1
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 9 PDLG-CRKLMRIYLNTDTFSGQLPAYLTH 92
P LG L ++LNT+ SGQ+P L H
Sbjct: 1375 PSLGNLTSLEHLFLNTNQLSGQIPPSLGH 1403
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +3
Query: 21 CRKLMRIYLNTDTFSGQLPAYLTHYVNYPHKNL 119
C L + L+ + F G +PA L ++ NL
Sbjct: 534 CENLQEVVLDQNNFGGSIPASLGKLISLKSLNL 566
>12_01_0808 + 7418878-7420476
Length = 532
Score = 26.6 bits (56), Expect = 2.8
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 21 CRKLMRIYLNTDTFSGQLPA 80
CR L R+ L ++FSG++PA
Sbjct: 173 CRSLQRLILAGNSFSGEVPA 192
>11_06_0129 - 20397179-20397537,20397749-20400497
Length = 1035
Score = 26.6 bits (56), Expect = 2.8
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 18 GCRKLMRIYLNTDTFSGQLPA 80
GC KLM ++L + G++PA
Sbjct: 143 GCTKLMTLHLGNNQLQGEIPA 163
>11_01_0456 +
3522599-3523921,3524005-3524027,3524097-3525265,
3525373-3525737
Length = 959
Score = 26.6 bits (56), Expect = 2.8
Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +3
Query: 9 PDLGCRKLMR-IYLNTDTFSGQLPAYLTH 92
P LG ++ +YL+T++F+G++P L H
Sbjct: 92 PSLGNLTFLKFLYLDTNSFTGEIPLSLGH 120
>10_08_0727 - 20133293-20135701
Length = 802
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 18 GCRKLMRIYLNTDTFSGQLPAYLTHYVNYPHKNLCDQNW 134
GCR L + +++FSG P L VN + N+ N+
Sbjct: 248 GCRSLDLFDVGSNSFSGAAPFGLLALVNITYFNVSSNNF 286
>10_08_0327 + 16797366-16800639,16800979-16801067,16801120-16801593
Length = 1278
Score = 26.6 bits (56), Expect = 2.8
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 9 PDLG-CRKLMRIYLNTDTFSGQLPAYLTHYVNYPHKNL 119
P+LG KL +YL T+ F+G +PA L N +L
Sbjct: 400 PELGKASKLNILYLFTNKFTGSIPAELGELENLTELDL 437
>10_01_0099 - 1202668-1203023,1203097-1206037
Length = 1098
Score = 26.6 bits (56), Expect = 2.8
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 4/30 (13%)
Frame = +3
Query: 3 SGP---DLG-CRKLMRIYLNTDTFSGQLPA 80
SGP +LG C KL + +N + FSG LPA
Sbjct: 603 SGPIPEELGRCTKLQLLRINNNHFSGNLPA 632
>05_06_0124 - 25822176-25822633,25822738-25825420
Length = 1046
Score = 26.6 bits (56), Expect = 2.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 30 LMRIYLNTDTFSGQLPAYLTHYVNYPHKN 116
L R+Y++ + FSG+LPA T + +N
Sbjct: 465 LTRLYIHNNRFSGRLPATATKLQKFNAEN 493
>04_04_0584 +
26381220-26381232,26381583-26381594,26381921-26382028,
26382137-26382217,26382320-26382465,26382550-26382624,
26382709-26382756,26382845-26382994,26383081-26383140,
26383394-26384274,26384674-26385670,26385887-26385895
Length = 859
Score = 26.6 bits (56), Expect = 2.8
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +3
Query: 9 PDLGCRKLMRI--YLNTDTFSGQLPAYLTHYVNYPHKNLCDQ 128
P LGCRK+ + N+ S + + VNY + L DQ
Sbjct: 69 PHLGCRKIQHVGKNFNSPELSNTIGTIASEVVNYGGQMLYDQ 110
>04_03_0396 + 15361501-15361663,15361726-15361806,15361909-15362054
Length = 129
Score = 26.6 bits (56), Expect = 2.8
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +3
Query: 9 PDLGCRKLMRI--YLNTDTFSGQLPAYLTHYVNYPHKNLCDQ 128
P LGCRK+ + N+ S + + VNY + L DQ
Sbjct: 79 PHLGCRKIQHVGKNFNSPELSNTIGTIASEVVNYGGQMLYDQ 120
>03_02_0482 +
8798931-8799024,8799118-8799253,8799435-8799506,
8799583-8799654,8799798-8799869,8800133-8800204,
8800530-8800627,8800892-8801062,8801141-8801473,
8802494-8802739,8802884-8803017,8803132-8803344
Length = 570
Score = 26.6 bits (56), Expect = 2.8
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +3
Query: 9 PDLG-CRKLMRIYLNTDTFSGQLPA 80
P+LG C KL ++YL + SG +P+
Sbjct: 114 PELGNCTKLQQLYLQGNYLSGHIPS 138
>01_07_0167 -
41613834-41613842,41614060-41615056,41615456-41616336,
41616437-41616508,41616590-41616649,41616736-41616885,
41616974-41617021,41617107-41617181,41617266-41617411,
41617514-41617594,41617703-41617810,41618046-41618057,
41618137-41618148,41618499-41618546,41619021-41619105
Length = 927
Score = 26.6 bits (56), Expect = 2.8
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +3
Query: 9 PDLGCRKLMRI--YLNTDTFSGQLPAYLTHYVNYPHKNLCDQ 128
P LGCRK+ + N+ S + + VNY + L DQ
Sbjct: 113 PHLGCRKIQHVGKNFNSPELSNTIGTIASEVVNYGGQMLYDQ 154
>11_03_0171 + 11111534-11113207
Length = 557
Score = 26.2 bits (55), Expect = 3.6
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +3
Query: 21 CRKLMRIYLNTDTFSGQLPA 80
C++L R+ L+ + FSG++PA
Sbjct: 166 CKQLQRLMLSGNGFSGEIPA 185
>07_01_0234 + 1715338-1718233,1718351-1718760
Length = 1101
Score = 26.2 bits (55), Expect = 3.6
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 21 CRKLMRIYLNTDTFSGQLPAYLTHYVN 101
CR+L + ++ F+G LP Y+ ++ N
Sbjct: 432 CRQLQTLDISNSFFTGNLPDYMGNFSN 458
>07_01_0024 +
159839-159923,160395-160442,160884-160895,161347-161427,
161530-161675,161918-161965,162054-162203,165647-165706,
165788-165859,165960-166409,166640-166839,167239-168236,
168676-168683,169057-169230,169341-169659,169748-169824,
169897-169966,170040-170111,170204-170418,170540-170665,
170751-171046,171133-171157,171163-171303,171400-171498,
171571-171702,171793-171912
Length = 1407
Score = 26.2 bits (55), Expect = 3.6
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +3
Query: 9 PDLGCRKLMRI--YLNTDTFSGQLPAYLTHYVNYPHKNLCDQ 128
P LGCRK+ + N+ S + + VNY + L DQ
Sbjct: 73 PHLGCRKIQHVGKNFNSPELSNTIGTIASKVVNYGGQMLYDQ 114
>04_04_0442 - 25229186-25229568,25229740-25232671
Length = 1104
Score = 26.2 bits (55), Expect = 3.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 21 CRKLMRIYLNTDTFSGQLPAYLTHYVNYPHKNLCD 125
C KL + LN + F G +PA L NLC+
Sbjct: 122 CSKLTGLNLNNNQFQGTIPAELGKLAMMITFNLCN 156
>02_05_0061 +
25506648-25509399,25509564-25509901,25510392-25510593,
25510779-25510854,25512036-25512294
Length = 1208
Score = 26.2 bits (55), Expect = 3.6
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 45 LNTDTFSGQLPAYLTHYVNYPHKNLCDQNW 134
L+++ FSGQ+P + H++ NL N+
Sbjct: 599 LSSNNFSGQIPKFFGHFLTLYDLNLSYNNF 628
>11_08_0011 +
27612206-27615110,27615211-27615538,27615989-27616059,
27616962-27617118,27617676-27617709
Length = 1164
Score = 25.8 bits (54), Expect = 4.8
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 21 CRKLMRIYLNTDTFSGQLPAYL 86
CR L IY+ + F+G +P Y+
Sbjct: 442 CRNLSWIYIGMNYFTGSIPDYI 463
>10_08_0477 -
18188280-18188490,18188572-18188748,18189141-18189304,
18189667-18189720,18190572-18191054
Length = 362
Score = 25.8 bits (54), Expect = 4.8
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -2
Query: 129 FGHTNFCVDSLRNEL 85
FGHT+FC DS+ +E+
Sbjct: 278 FGHTHFCWDSVVDEI 292
>06_01_0602 - 4342333-4342790,4342899-4345623
Length = 1060
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 18 GCRKLMRIYLNTDTFSGQLPAYL 86
G R+L R+YL+ + SG++P L
Sbjct: 392 GMRRLERLYLSDNMLSGEIPPSL 414
>03_06_0126 + 31865339-31867943,31868176-31868660
Length = 1029
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 18 GCRKLMRIYLNTDTFSGQLPAYL 86
G R LMR+ + + FSG +PA L
Sbjct: 93 GLRGLMRLSVGANAFSGPIPASL 115
>03_02_0132 -
5808606-5808696,5808804-5808875,5809133-5809204,
5809299-5809379,5809475-5809618,5809708-5809779,
5810027-5810140,5810684-5810755,5811462-5811609,
5812120-5812231
Length = 325
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/29 (34%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 9 PDLG-CRKLMRIYLNTDTFSGQLPAYLTH 92
P++G +KL +YL+ + F G++P L +
Sbjct: 162 PEIGELKKLTHLYLSFNNFKGEIPVELAN 190
>03_01_0314 - 2477593-2480685
Length = 1030
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +3
Query: 15 LGCRKLMRIYLNTDTFSGQLPAYLTHYVNYPHKNLCDQNWK 137
LG L I L ++ F G+LP L ++ D N+K
Sbjct: 89 LGLAGLTSIVLQSNAFDGELPPVLVSIPTLRELDVSDNNFK 129
>02_02_0025 + 6183328-6186127,6186265-6186623
Length = 1052
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 27 KLMRIYLNTDTFSGQLPAYLTHYVNYPHKNL 119
KL +YL+ + FSG +PA L + + NL
Sbjct: 488 KLTELYLDGNNFSGTIPASLGQWRHLEKLNL 518
>01_06_0355 + 28657833-28660665,28660762-28661126
Length = 1065
Score = 25.8 bits (54), Expect = 4.8
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +3
Query: 18 GCRKLMRIYLNTDTFSGQLPA 80
GC+ L + +NT+ F+G +P+
Sbjct: 438 GCKSLKYLVMNTNYFTGSIPS 458
>01_01_0978 + 7738232-7740848,7740929-7741320
Length = 1002
Score = 25.8 bits (54), Expect = 4.8
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +3
Query: 9 PD-LG-CRKLMRIYLNTDTFSGQLPAYLTHYVNYPHKNLCDQN 131
PD LG CR+L R+ L+ + G +PA + PH +L + N
Sbjct: 400 PDGLGRCRRLRRVRLSNNRLDGDVPAAVW---GLPHMSLLELN 439
>12_01_0718 + 6339982-6342981
Length = 999
Score = 25.4 bits (53), Expect = 6.4
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +3
Query: 27 KLMRIYLNTDTFSGQLPAYLTHYVNYPHKNL 119
+L + ++ D F+GQ+PA + H N + +L
Sbjct: 130 ELTHLDISDDNFAGQVPAGIGHLTNLVYLDL 160
>12_01_0138 -
1069616-1069894,1070056-1070607,1070689-1071046,
1071214-1071503,1072257-1072360,1072419-1072575,
1073229-1073273,1073636-1073692
Length = 613
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 168 SITKKYMT*TASNFGHTNFCVDSLRNELNRRAVV 67
S K+ T S FGH++F + L LNR V+
Sbjct: 409 SFQKQMKTEYISTFGHSHFLLPDLLPSLNRVVVL 442
>11_01_0137 -
1137979-1138257,1138419-1138970,1139052-1139409,
1139577-1139869,1140623-1140675,1140785-1140941,
1141666-1141683,1141846-1141929,1142005-1142064,
1142182-1142222,1142316-1142451
Length = 676
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 168 SITKKYMT*TASNFGHTNFCVDSLRNELNRRAVV 67
S K+ T S FGH++F + L LNR V+
Sbjct: 472 SFQKQMKTEYISTFGHSHFLLPDLLPSLNRVVVL 505
>09_04_0524 + 18321110-18323978,18324098-18324576
Length = 1115
Score = 25.4 bits (53), Expect = 6.4
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +3
Query: 9 PDLG-CRKLMRIYLNTDTFSGQLPAYL 86
P+LG CR+L I L+ ++ +G +PA L
Sbjct: 319 PELGRCRQLTLIDLSLNSLTGSIPATL 345
>08_02_0192 + 14048828-14048873,14048960-14051169
Length = 751
Score = 25.4 bits (53), Expect = 6.4
Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 9 PDLGC-RKLMRIYLNTDTFSGQLPAYLTHYVNYPHKNLCDQNW 134
P +G +L + L +++F G +P LT+ N + ++ D N+
Sbjct: 275 PGIGSIARLEELVLASNSFDGIIPMELTNCTNLKYLDISDNNF 317
>05_03_0209 +
10139857-10140041,10140223-10140294,10140374-10140445,
10141095-10141166,10141427-10141498,10141628-10141663,
10141958-10142029,10142107-10142181,10142449-10142514,
10142610-10142675,10142748-10142792,10142882-10142946,
10143066-10143445,10143530-10143728,10143801-10143959,
10144042-10144160,10144294-10144504,10145336-10145567,
10145650-10145800,10145899-10146162
Length = 870
Score = 25.4 bits (53), Expect = 6.4
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = +3
Query: 27 KLMRIYLNTDTFSGQLPAYL---THYVNYPH 110
KL R+ + + F+G++P YL T+ V PH
Sbjct: 130 KLQRLKASDNGFNGKIPEYLGTITNLVEIPH 160
>05_01_0493 + 4113869-4116728,4116859-4117370
Length = 1123
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 9 PDLG-CRKLMRIYLNTDTFSGQLPAYL 86
P+LG C L IYL + SG +PA L
Sbjct: 263 PELGRCGCLENIYLYENALSGSIPAQL 289
>12_02_1144 + 26449490-26452292,26452401-26452742,26453141-26453160
Length = 1054
Score = 25.0 bits (52), Expect = 8.4
Identities = 9/38 (23%), Positives = 18/38 (47%)
Frame = +3
Query: 18 GCRKLMRIYLNTDTFSGQLPAYLTHYVNYPHKNLCDQN 131
GC+ + ++L + F G++P L H ++ N
Sbjct: 573 GCQSMEYLFLQGNQFGGRIPQSLVSLKGLQHLDMSQNN 610
>11_08_0024 + 27747449-27747940,27748141-27750177
Length = 842
Score = 25.0 bits (52), Expect = 8.4
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +3
Query: 21 CRKLMRIYLNTDTFSGQLPAYL 86
CRKL + ++++ F+G LP Y+
Sbjct: 375 CRKLSVLEIDSNYFTGNLPDYV 396
>11_08_0009 +
27600881-27602592,27602665-27603008,27603159-27603806,
27603908-27604296
Length = 1030
Score = 25.0 bits (52), Expect = 8.4
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +3
Query: 21 CRKLMRIYLNTDTFSGQLPAYL 86
CRKL + ++++ F+G LP Y+
Sbjct: 448 CRKLSVLEIDSNYFTGNLPDYV 469
>11_06_0445 - 23679918-23680282,23680415-23683349
Length = 1099
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 27 KLMRIYLNTDTFSGQLPAYLTHYVNYPHKNLCDQN 131
+L+ +YL + +GQ+P+ L N N+ N
Sbjct: 533 QLIELYLQENELTGQIPSSLARCTNLVELNISRNN 567
>09_03_0127 + 12573429-12574857,12575269-12575903
Length = 687
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 18 GCRKLMRIYLNTDTFSGQLPAYL 86
GC +L IY+ + SG LP L
Sbjct: 137 GCARLTHIYVGDNRLSGSLPPSL 159
>03_03_0144 +
14826797-14827435,14827561-14827771,14827861-14828155,
14828285-14828674,14829131-14829208,14829296-14829518
Length = 611
Score = 25.0 bits (52), Expect = 8.4
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 4/27 (14%)
Frame = +3
Query: 90 HYVNYPHKNL----CDQNWKRFMSCIF 158
HY N PHK+L QNW + +F
Sbjct: 147 HYANIPHKSLTVEKAIQNWVHYEGKVF 173
>01_05_0610 - 23636097-23638958
Length = 953
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = +3
Query: 3 SGP---DLGCRKLMRIYLNTDTFSGQLPAYL 86
SGP D+G L+ + L ++ SG +P+YL
Sbjct: 549 SGPLPSDIGASALVSLVLYGNSLSGSIPSYL 579
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,086,449
Number of Sequences: 37544
Number of extensions: 75750
Number of successful extensions: 428
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 428
length of database: 14,793,348
effective HSP length: 46
effective length of database: 13,066,324
effective search space used: 261326480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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