Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20o06
         (202 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    22   3.0  
AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18...    21   4.0  
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    21   7.0  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    20   9.3  

>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 201 FFFVRKLCCFISI 163
           F F   LCCF+S+
Sbjct: 195 FTFSSSLCCFLSV 207


>AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18D
           protein.
          Length = 380

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -2

Query: 195 FVRKLCCFISITKKYMT*TASNFGHTNFCVDSLRNELNRRAV 70
           F+R  C + S      T  A+ FG T + + +  +EL + A+
Sbjct: 246 FIRPACLYPSEVLNVRTAIATGFGRTEY-LGAKSDELRKVAL 286


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = -2

Query: 60  TCRCSSRCALIYDNPN 13
           TCR   RC L  D  N
Sbjct: 465 TCRLPPRCVLCPDGSN 480


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 10/43 (23%), Positives = 19/43 (44%)
 Frame = -2

Query: 201  FFFVRKLCCFISITKKYMT*TASNFGHTNFCVDSLRNELNRRA 73
            FF    +   + +   ++    SNFG ++    +  NE N+ A
Sbjct: 1009 FFLATVVIGNLVVLNLFLALLLSNFGSSSLSAPTADNETNKIA 1051


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,103
Number of Sequences: 2352
Number of extensions: 2964
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 44
effective length of database: 460,491
effective search space used: 10130802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)