Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20o06
         (202 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF125954-3|AAD14706.3|  323|Caenorhabditis elegans Serpentine re...    30   0.20 
AC006769-4|AAF60584.1|  323|Caenorhabditis elegans Hypothetical ...    30   0.20 
L15313-10|AAP68920.1|  355|Caenorhabditis elegans Hypothetical p...    27   2.4  
L15313-9|AAP68921.1|  357|Caenorhabditis elegans Hypothetical pr...    27   2.4  
AL117193-9|CAB60302.2|  737|Caenorhabditis elegans Hypothetical ...    26   3.2  
Z81052-5|CAB02876.1|  512|Caenorhabditis elegans Hypothetical pr...    26   4.2  
AL022288-4|CAA18365.1|  461|Caenorhabditis elegans Hypothetical ...    25   5.6  
AC024798-10|AAK29912.1|  254|Caenorhabditis elegans Hypothetical...    25   5.6  
AC024785-2|AAF60599.2|  467|Caenorhabditis elegans C-type lectin...    25   7.4  
Z82093-6|CAB05014.1|  256|Caenorhabditis elegans Hypothetical pr...    25   9.8  

>AF125954-3|AAD14706.3|  323|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 71 protein.
          Length = 323

 Score = 30.3 bits (65), Expect = 0.20
 Identities = 16/38 (42%), Positives = 25/38 (65%)
 Frame = +2

Query: 77  RLFNSLRKLSTQKFV*PKLEAVYVMYFFVILIKQHNFL 190
           RL +S+R+LSTQKF+       +V+YFF  ++   +FL
Sbjct: 115 RLMSSVRRLSTQKFI----GNCFVVYFFSAVVLIFSFL 148


>AC006769-4|AAF60584.1|  323|Caenorhabditis elegans Hypothetical
           protein Y45G12C.9 protein.
          Length = 323

 Score = 30.3 bits (65), Expect = 0.20
 Identities = 16/38 (42%), Positives = 25/38 (65%)
 Frame = +2

Query: 77  RLFNSLRKLSTQKFV*PKLEAVYVMYFFVILIKQHNFL 190
           RL +S+R+LSTQKF+       +V+YFF  ++   +FL
Sbjct: 115 RLMSSVRRLSTQKFI----GNCFVVYFFSAVVLIFSFL 148


>L15313-10|AAP68920.1|  355|Caenorhabditis elegans Hypothetical
           protein ZK353.1a protein.
          Length = 355

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 81  YLTHYVNYPHKNLCDQNWKR 140
           Y+   +NY   +LC  NW+R
Sbjct: 213 YIERLLNYAEMDLCPSNWRR 232


>L15313-9|AAP68921.1|  357|Caenorhabditis elegans Hypothetical
           protein ZK353.1b protein.
          Length = 357

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 81  YLTHYVNYPHKNLCDQNWKR 140
           Y+   +NY   +LC  NW+R
Sbjct: 215 YIERLLNYAEMDLCPSNWRR 234


>AL117193-9|CAB60302.2|  737|Caenorhabditis elegans Hypothetical
           protein Y105C5A.15 protein.
          Length = 737

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 123 HTNFCVDSLRNELNR 79
           H  FC D L+NEL+R
Sbjct: 346 HLRFCADDLKNELSR 360


>Z81052-5|CAB02876.1|  512|Caenorhabditis elegans Hypothetical
           protein D2023.6 protein.
          Length = 512

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -2

Query: 192 VRKLCCFISITKKYMT*TASNFGHTNFCVDSLRN 91
           +RK+  F  +TK     T +  G+T + VDS+ +
Sbjct: 3   IRKILAFKPLTKVLFVGTGAGAGYTAYTVDSVED 36


>AL022288-4|CAA18365.1|  461|Caenorhabditis elegans Hypothetical
           protein ZK1025.7 protein.
          Length = 461

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 9/34 (26%), Positives = 15/34 (44%)
 Frame = +1

Query: 49  TPTRLADNCPPXXXXXXXXXXXXCVTKIGSGLCH 150
           T  ++ +N PP            C+ K+ S +CH
Sbjct: 395 TMNKIFENSPPAFSYKPIETLNKCIAKVKSDVCH 428


>AC024798-10|AAK29912.1|  254|Caenorhabditis elegans Hypothetical
           protein Y48G9A.12 protein.
          Length = 254

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +3

Query: 42  YLNTDTFSGQLPAYLTHYVNYPHKNLCDQNWKRFMSCIFSL 164
           + +  TFSG     L  + N+P   L  +++    S +FSL
Sbjct: 174 FASRQTFSGDFGLKLHKFCNFPRVFLLSESFLERYSVVFSL 214


>AC024785-2|AAF60599.2|  467|Caenorhabditis elegans C-type lectin
           protein 71 protein.
          Length = 467

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = +3

Query: 39  IYLNTDTFSGQLPAYLTHYVNY--PHKN 116
           IY NTD  + Q+  Y +++ NY  P+ N
Sbjct: 440 IYTNTDVETMQIRLYSSYFTNYWLPYSN 467


>Z82093-6|CAB05014.1|  256|Caenorhabditis elegans Hypothetical
           protein ZK39.7 protein.
          Length = 256

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +3

Query: 87  THYVNYPHKNLCDQNWKRF 143
           +H   Y     CD  WKRF
Sbjct: 43  SHVAQYKETRGCDSGWKRF 61


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,652,216
Number of Sequences: 27780
Number of extensions: 75995
Number of successful extensions: 144
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 144
length of database: 12,740,198
effective HSP length: 46
effective length of database: 11,462,318
effective search space used: 229246360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)