Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20m10
(626 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a pr... 93 6e-19
U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a pr... 93 6e-19
L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens (c... 93 6e-19
BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a ... 93 6e-19
BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a ... 93 6e-19
AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A ... 93 6e-19
U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a pr... 91 2e-18
BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein. 88 3e-17
BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein. 88 3e-17
BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein. 88 3e-17
AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein. 88 3e-17
AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L... 78 2e-14
BC105600-1|AAI05601.1| 121|Homo sapiens MGC70863 protein protein. 63 9e-10
BC065556-1|AAH65556.1| 121|Homo sapiens similar to RPL23AP7 pro... 62 1e-09
AL844851-8|CAM25789.1| 123|Homo sapiens major histocompatibilit... 51 4e-06
AL844851-6|CAI18575.2| 442|Homo sapiens major histocompatibilit... 51 4e-06
AL669813-9|CAM24949.1| 123|Homo sapiens major histocompatibilit... 51 4e-06
AL669813-7|CAI17628.1| 442|Homo sapiens major histocompatibilit... 51 4e-06
AL645939-8|CAM25440.1| 123|Homo sapiens major histocompatibilit... 51 4e-06
AL645939-6|CAI18086.2| 442|Homo sapiens major histocompatibilit... 51 4e-06
AL022723-13|CAI20359.1| 442|Homo sapiens major histocompatibili... 51 4e-06
BX005428-8|CAM26185.1| 123|Homo sapiens major histocompatibilit... 47 5e-05
BX005428-6|CAM26183.1| 442|Homo sapiens major histocompatibilit... 47 5e-05
BC009260-1|AAH09260.2| 460|Homo sapiens HLA-F protein protein. 47 5e-05
AK125274-1|BAC86108.1| 349|Homo sapiens protein ( Homo sapiens ... 43 0.001
>U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 93.5 bits (222), Expect = 6e-19
Identities = 43/69 (62%), Positives = 53/69 (76%)
Frame = +1
Query: 418 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 597
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 598 PLTSEAAMK 624
PLT+E+AMK
Sbjct: 80 PLTTESAMK 88
>U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 93.5 bits (222), Expect = 6e-19
Identities = 43/69 (62%), Positives = 53/69 (76%)
Frame = +1
Query: 418 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 597
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 598 PLTSEAAMK 624
PLT+E+AMK
Sbjct: 80 PLTTESAMK 88
>L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens
(clone 01) liver expressed protein mRNA, 3'end. ).
Length = 147
Score = 93.5 bits (222), Expect = 6e-19
Identities = 43/69 (62%), Positives = 53/69 (76%)
Frame = +1
Query: 418 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 597
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 11 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 70
Query: 598 PLTSEAAMK 624
PLT+E+AMK
Sbjct: 71 PLTTESAMK 79
>BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 93.5 bits (222), Expect = 6e-19
Identities = 43/69 (62%), Positives = 53/69 (76%)
Frame = +1
Query: 418 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 597
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 598 PLTSEAAMK 624
PLT+E+AMK
Sbjct: 80 PLTTESAMK 88
>BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 93.5 bits (222), Expect = 6e-19
Identities = 43/69 (62%), Positives = 53/69 (76%)
Frame = +1
Query: 418 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 597
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 598 PLTSEAAMK 624
PLT+E+AMK
Sbjct: 80 PLTTESAMK 88
>AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A
protein.
Length = 156
Score = 93.5 bits (222), Expect = 6e-19
Identities = 43/69 (62%), Positives = 53/69 (76%)
Frame = +1
Query: 418 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 597
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 598 PLTSEAAMK 624
PLT+E+AMK
Sbjct: 80 PLTTESAMK 88
>U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 91.5 bits (217), Expect = 2e-18
Identities = 42/69 (60%), Positives = 52/69 (75%)
Frame = +1
Query: 418 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 597
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y II F
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIINF 79
Query: 598 PLTSEAAMK 624
PLT+E+AMK
Sbjct: 80 PLTTESAMK 88
>BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 87.8 bits (208), Expect = 3e-17
Identities = 41/69 (59%), Positives = 53/69 (76%)
Frame = +1
Query: 418 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 597
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 598 PLTSEAAMK 624
PLT+E AMK
Sbjct: 80 PLTTEFAMK 88
>BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 87.8 bits (208), Expect = 3e-17
Identities = 41/69 (59%), Positives = 53/69 (76%)
Frame = +1
Query: 418 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 597
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 598 PLTSEAAMK 624
PLT+E AMK
Sbjct: 80 PLTTEFAMK 88
>BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 87.8 bits (208), Expect = 3e-17
Identities = 41/69 (59%), Positives = 53/69 (76%)
Frame = +1
Query: 418 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 597
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 598 PLTSEAAMK 624
PLT+E AMK
Sbjct: 80 PLTTEFAMK 88
>AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein.
Length = 130
Score = 87.8 bits (208), Expect = 3e-17
Identities = 41/69 (59%), Positives = 53/69 (76%)
Frame = +1
Query: 418 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 597
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 598 PLTSEAAMK 624
PLT+E AMK
Sbjct: 80 PLTTEFAMK 88
>AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L23A
like protein.
Length = 156
Score = 78.2 bits (184), Expect = 2e-14
Identities = 35/69 (50%), Positives = 49/69 (71%)
Frame = +1
Query: 418 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 597
KALKA++ +KG H +K R S+ F+RPKT R P+YP KS P+RN++ Y +IKF
Sbjct: 20 KALKAKKAALKGVHSHIKKKTRTSLTFQRPKTLRRRRRPEYPWKSTPRRNKLGHYAVIKF 79
Query: 598 PLTSEAAMK 624
PLT+E+A+K
Sbjct: 80 PLTTESAVK 88
>BC105600-1|AAI05601.1| 121|Homo sapiens MGC70863 protein protein.
Length = 121
Score = 62.9 bits (146), Expect = 9e-10
Identities = 27/46 (58%), Positives = 36/46 (78%)
Frame = +1
Query: 487 SVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMK 624
S+ FRRPKT R P+YP+KS P+RN++ Y IIKFPLT+E+A+K
Sbjct: 2 SLTFRRPKTLRLRRQPRYPQKSTPRRNKLGHYAIIKFPLTTESAVK 47
>BC065556-1|AAH65556.1| 121|Homo sapiens similar to RPL23AP7
protein protein.
Length = 121
Score = 62.5 bits (145), Expect = 1e-09
Identities = 27/46 (58%), Positives = 35/46 (76%)
Frame = +1
Query: 487 SVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMK 624
S+ FRRPKT R P+YPRKS P+RN++ Y IIKFPL +E+A+K
Sbjct: 2 SLTFRRPKTLRLRRQPRYPRKSTPRRNKLGHYAIIKFPLATESAVK 47
>AL844851-8|CAM25789.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 50.8 bits (116), Expect = 4e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -1
Query: 617 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 438
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 27 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 86
Query: 437 L*ALSALVTGF 405
AL +L GF
Sbjct: 87 FLALQSLRFGF 97
>AL844851-6|CAI18575.2| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 50.8 bits (116), Expect = 4e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -1
Query: 617 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 438
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 437 L*ALSALVTGF 405
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>AL669813-9|CAM24949.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 50.8 bits (116), Expect = 4e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -1
Query: 617 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 438
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 27 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 86
Query: 437 L*ALSALVTGF 405
AL +L GF
Sbjct: 87 FLALQSLRFGF 97
>AL669813-7|CAI17628.1| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 50.8 bits (116), Expect = 4e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -1
Query: 617 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 438
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 437 L*ALSALVTGF 405
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>AL645939-8|CAM25440.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 50.8 bits (116), Expect = 4e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -1
Query: 617 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 438
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 27 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 86
Query: 437 L*ALSALVTGF 405
AL +L GF
Sbjct: 87 FLALQSLRFGF 97
>AL645939-6|CAI18086.2| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 50.8 bits (116), Expect = 4e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -1
Query: 617 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 438
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 437 L*ALSALVTGF 405
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>AL022723-13|CAI20359.1| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 50.8 bits (116), Expect = 4e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -1
Query: 617 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 438
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 437 L*ALSALVTGF 405
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>BX005428-8|CAM26185.1| 123|Homo sapiens major histocompatibility
complex class I F protein.
Length = 123
Score = 47.2 bits (107), Expect = 5e-05
Identities = 32/71 (45%), Positives = 39/71 (54%)
Frame = -1
Query: 617 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 438
A S V G LM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 27 AYSVVSGLLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 86
Query: 437 L*ALSALVTGF 405
AL +L GF
Sbjct: 87 FLALQSLRFGF 97
>BX005428-6|CAM26183.1| 442|Homo sapiens major histocompatibility
complex class I F protein.
Length = 442
Score = 47.2 bits (107), Expect = 5e-05
Identities = 32/71 (45%), Positives = 39/71 (54%)
Frame = -1
Query: 617 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 438
A S V G LM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGLLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 437 L*ALSALVTGF 405
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>BC009260-1|AAH09260.2| 460|Homo sapiens HLA-F protein protein.
Length = 460
Score = 47.2 bits (107), Expect = 5e-05
Identities = 32/71 (45%), Positives = 39/71 (54%)
Frame = -1
Query: 617 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 438
A S V G LM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 364 AYSVVSGLLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 423
Query: 437 L*ALSALVTGF 405
AL +L GF
Sbjct: 424 FLALQSLRFGF 434
>AK125274-1|BAC86108.1| 349|Homo sapiens protein ( Homo sapiens
cDNA FLJ43284 fis, clone LYMPB2000083, highly similar
to HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, ALPHA CHAIN F
PRECURSOR. ).
Length = 349
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/47 (53%), Positives = 28/47 (59%)
Frame = -1
Query: 617 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRI 477
A S V GNLM+ S FLLG F GYLGCL +VLG RK L +
Sbjct: 260 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKAQLLSV 306
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,223,893
Number of Sequences: 237096
Number of extensions: 974523
Number of successful extensions: 2392
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2388
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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