Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20m10
(626 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p pro... 108 7e-24
AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA ... 108 7e-24
DQ450529-1|ABE27283.1| 277|Drosophila melanogaster L23A ribosom... 107 1e-23
AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal pr... 101 6e-22
BT003457-1|AAO39460.1| 985|Drosophila melanogaster RH34107p pro... 31 1.7
AE014297-1126|AAF54512.1| 985|Drosophila melanogaster CG3999-PA... 31 1.7
BT021430-1|AAX33578.1| 290|Drosophila melanogaster GM06171p pro... 30 2.9
AY051991-1|AAK93415.1| 1010|Drosophila melanogaster LD45758p pro... 28 9.0
AF520716-1|AAM55245.1| 1010|Drosophila melanogaster MICAL-like p... 28 9.0
AE014296-2228|AAF49857.2| 1010|Drosophila melanogaster CG11259-P... 28 9.0
>BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p
protein.
Length = 269
Score = 108 bits (259), Expect = 7e-24
Identities = 48/68 (70%), Positives = 56/68 (82%)
Frame = +1
Query: 421 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 600
A K Q+K++KG G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 134 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 193
Query: 601 LTSEAAMK 624
LT+EAAMK
Sbjct: 194 LTTEAAMK 201
>AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA
protein.
Length = 277
Score = 108 bits (259), Expect = 7e-24
Identities = 48/68 (70%), Positives = 56/68 (82%)
Frame = +1
Query: 421 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 600
A K Q+K++KG G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 201
Query: 601 LTSEAAMK 624
LT+EAAMK
Sbjct: 202 LTTEAAMK 209
>DQ450529-1|ABE27283.1| 277|Drosophila melanogaster L23A ribosomal
protein naturalvariant protein.
Length = 277
Score = 107 bits (257), Expect = 1e-23
Identities = 48/68 (70%), Positives = 56/68 (82%)
Frame = +1
Query: 421 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 600
A K Q+K++KG G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRANVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 201
Query: 601 LTSEAAMK 624
LT+EAAMK
Sbjct: 202 LTTEAAMK 209
>AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal
protein L23a protein.
Length = 269
Score = 101 bits (243), Expect = 6e-22
Identities = 47/68 (69%), Positives = 55/68 (80%)
Frame = +1
Query: 421 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 600
A K Q+K++K G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 135 AKKVQKKIIKA-FGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 193
Query: 601 LTSEAAMK 624
LT+EAAMK
Sbjct: 194 LTTEAAMK 201
>BT003457-1|AAO39460.1| 985|Drosophila melanogaster RH34107p
protein.
Length = 985
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 459 MFTFYNLPLSLKCFSNRFHYFFLSLNPSLFG 367
M+ Y+ P LK +NR H+F L+L + G
Sbjct: 368 MYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398
>AE014297-1126|AAF54512.1| 985|Drosophila melanogaster CG3999-PA
protein.
Length = 985
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 459 MFTFYNLPLSLKCFSNRFHYFFLSLNPSLFG 367
M+ Y+ P LK +NR H+F L+L + G
Sbjct: 368 MYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398
>BT021430-1|AAX33578.1| 290|Drosophila melanogaster GM06171p
protein.
Length = 290
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 537 IPKEVSA*EKSHGCLQHH*IPSHV*SSNEE 626
+P+E+ A ++ HG +QHH +P+ +EE
Sbjct: 163 VPQEIGAHQEPHGRVQHHQVPTDHRGGHEE 192
>AY051991-1|AAK93415.1| 1010|Drosophila melanogaster LD45758p protein.
Length = 1010
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Frame = +1
Query: 412 VTKALKAQRKVVKGEHGKRVRK------IRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM 573
+ K ++ + +V+ RVR+ I+N +H + EPP HP+ KS K ++
Sbjct: 905 LVKVVEMRNEVIDSLETDRVREAREDMSIKNRLHIYNSEREEPPAHPRSADKSSKKLSKK 964
Query: 574 D 576
+
Sbjct: 965 E 965
>AF520716-1|AAM55245.1| 1010|Drosophila melanogaster MICAL-like
protein protein.
Length = 1010
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Frame = +1
Query: 412 VTKALKAQRKVVKGEHGKRVRK------IRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM 573
+ K ++ + +V+ RVR+ I+N +H + EPP HP+ KS K ++
Sbjct: 905 LVKVVEMRNEVIDSLETDRVREAREDMSIKNRLHIYNSEREEPPAHPRSADKSSKKLSKK 964
Query: 574 D 576
+
Sbjct: 965 E 965
>AE014296-2228|AAF49857.2| 1010|Drosophila melanogaster CG11259-PA
protein.
Length = 1010
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Frame = +1
Query: 412 VTKALKAQRKVVKGEHGKRVRK------IRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM 573
+ K ++ + +V+ RVR+ I+N +H + EPP HP+ KS K ++
Sbjct: 905 LVKVVEMRNEVIDSLETDRVREAREDMSIKNRLHIYNSEREEPPAHPRSADKSSKKLSKK 964
Query: 574 D 576
+
Sbjct: 965 E 965
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,820,939
Number of Sequences: 53049
Number of extensions: 275404
Number of successful extensions: 955
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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