Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20m07
         (121 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0728 + 6023361-6023495,6024880-6025212,6025306-6025361,602...    29   0.53 
08_02_0034 - 11435678-11435702,11435787-11435816,11436364-114365...    26   4.9  
07_01_0434 - 3302926-3303072,3303402-3303545,3303644-3304293,330...    25   8.6  

>11_01_0728 +
           6023361-6023495,6024880-6025212,6025306-6025361,
           6025526-6025684,6025790-6025889,6026481-6026623,
           6026728-6026833,6027139-6027277,6027363-6027631,
           6027734-6027820
          Length = 508

 Score = 29.1 bits (62), Expect = 0.53
 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = +1

Query: 1   AIVGCLSLAVELS--PDNESSKKNMRQEIEGKLNYLVSARPT 120
           AI   L+LAVE+S   D   +       +  KL YLVS+RPT
Sbjct: 190 AIAAALALAVEVSGLEDFTGTPAEAAVFVSEKLEYLVSSRPT 231


>08_02_0034 -
           11435678-11435702,11435787-11435816,11436364-11436501,
           11436646-11436755,11436838-11436867,11437948-11437993,
           11438453-11438622,11439156-11439221,11439299-11439378,
           11440704-11440842,11440933-11441013,11441112-11441147,
           11441414-11441539,11442084-11442179,11443615-11443689,
           11444288-11444434,11445155-11445229,11445485-11445619,
           11445706-11445834,11446161-11446292,11446395-11446598
          Length = 689

 Score = 25.8 bits (54), Expect = 4.9
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = -2

Query: 111 GRHQIVKFTFDLLPHVF 61
           G++++VK+  DL+PH F
Sbjct: 526 GKNRVVKYAADLMPHSF 542


>07_01_0434 -
           3302926-3303072,3303402-3303545,3303644-3304293,
           3304410-3304493,3304651-3304703,3305127-3305197,
           3305285-3305362,3305775-3305903,3305988-3306044,
           3306693-3306923,3307748-3307882,3308609-3308684,
           3308768-3309024,3309095-3309202,3309328-3309526,
           3309600-3309604
          Length = 807

 Score = 25.0 bits (52), Expect = 8.6
 Identities = 16/31 (51%), Positives = 20/31 (64%)
 Frame = +1

Query: 1   AIVGCLSLAVELSPDNESSKKNMRQEIEGKL 93
           A VG LS A ELSPD+E+    +R + E KL
Sbjct: 426 AAVGDLSKAHELSPDDETIAAVLR-DAEEKL 455


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.309    0.126    0.338 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,972,821
Number of Sequences: 37544
Number of extensions: 29353
Number of successful extensions: 59
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 14,793,348
effective HSP length: 20
effective length of database: 14,042,468
effective search space used: 266806892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)