Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20m07
         (121 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC001703-1|AAH01703.1|  369|Homo sapiens hypothetical protein MG...    33   0.13 
AY358176-1|AAQ88543.1|  369|Homo sapiens TLEA6390 protein.             33   0.13 

>BC001703-1|AAH01703.1|  369|Homo sapiens hypothetical protein
           MGC3207 protein.
          Length = 369

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +1

Query: 1   AIVGCLSLAVELSPD-NESSKKNMRQEIEGKLNYLVSARPT 120
           A+VGCLSLAVEL           +   +  KL++LV+ARPT
Sbjct: 52  ALVGCLSLAVELQAGAGGPGLAALVAFVRDKLSFLVTARPT 92


>AY358176-1|AAQ88543.1|  369|Homo sapiens TLEA6390 protein.
          Length = 369

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +1

Query: 1   AIVGCLSLAVELSPD-NESSKKNMRQEIEGKLNYLVSARPT 120
           A+VGCLSLAVEL           +   +  KL++LV+ARPT
Sbjct: 52  ALVGCLSLAVELQAGAGGPGLAALVAFVRDKLSFLVTARPT 92


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.309    0.126    0.338 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,601,935
Number of Sequences: 237096
Number of extensions: 171747
Number of successful extensions: 288
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 288
length of database: 76,859,062
effective HSP length: 20
effective length of database: 72,117,142
effective search space used: 1370225698
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)