Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20m07
         (121 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060664-1|AAL28212.1|  364|Drosophila melanogaster GH08894p pro...    69   9e-13
AE014297-4750|AAF57155.1|  364|Drosophila melanogaster CG11334-P...    69   9e-13
AE014297-4749|AAF57154.1|  364|Drosophila melanogaster CG11334-P...    69   9e-13

>AY060664-1|AAL28212.1|  364|Drosophila melanogaster GH08894p
           protein.
          Length = 364

 Score = 68.9 bits (161), Expect = 9e-13
 Identities = 31/40 (77%), Positives = 38/40 (95%)
 Frame = +1

Query: 1   AIVGCLSLAVELSPDNESSKKNMRQEIEGKLNYLVSARPT 120
           AIVGCLSLAVE++P++  +KK++RQEIEGKLNYLVSARPT
Sbjct: 52  AIVGCLSLAVEINPEDFENKKSLRQEIEGKLNYLVSARPT 91


>AE014297-4750|AAF57155.1|  364|Drosophila melanogaster CG11334-PB,
           isoform B protein.
          Length = 364

 Score = 68.9 bits (161), Expect = 9e-13
 Identities = 31/40 (77%), Positives = 38/40 (95%)
 Frame = +1

Query: 1   AIVGCLSLAVELSPDNESSKKNMRQEIEGKLNYLVSARPT 120
           AIVGCLSLAVE++P++  +KK++RQEIEGKLNYLVSARPT
Sbjct: 52  AIVGCLSLAVEINPEDFENKKSLRQEIEGKLNYLVSARPT 91


>AE014297-4749|AAF57154.1|  364|Drosophila melanogaster CG11334-PA,
           isoform A protein.
          Length = 364

 Score = 68.9 bits (161), Expect = 9e-13
 Identities = 31/40 (77%), Positives = 38/40 (95%)
 Frame = +1

Query: 1   AIVGCLSLAVELSPDNESSKKNMRQEIEGKLNYLVSARPT 120
           AIVGCLSLAVE++P++  +KK++RQEIEGKLNYLVSARPT
Sbjct: 52  AIVGCLSLAVEINPEDFENKKSLRQEIEGKLNYLVSARPT 91


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.309    0.126    0.338 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,969,920
Number of Sequences: 53049
Number of extensions: 49489
Number of successful extensions: 95
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 95
length of database: 24,988,368
effective HSP length: 20
effective length of database: 23,927,388
effective search space used: 454620372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)