Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20l19
         (500 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   2.7  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   6.2  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   6.2  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   6.2  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   6.2  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.2  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 166 KNFSEEVGTMREQEGDGPE 222
           KNF++   + R  E DGPE
Sbjct: 415 KNFNDSPESNRSNEIDGPE 433


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 79  HFNGKPGALALRSNETTVPF 20
           HF G P ++ L  + T+V F
Sbjct: 185 HFGGTPDSITLFGDGTSVNF 204


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 79  HFNGKPGALALRSNETTVPF 20
           HF G P ++ L  + T+V F
Sbjct: 185 HFGGTPDSITLFGDGTSVNF 204


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 79  HFNGKPGALALRSNETTVPF 20
           HF G P ++ L  + T+V F
Sbjct: 185 HFGGTPDSITLFGDGTSVNF 204


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 79  HFNGKPGALALRSNETTVPF 20
           HF G P ++ L  + T+V F
Sbjct: 185 HFGGTPDSITLFGDGTSVNF 204


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +2

Query: 383 WRLLGELTCHPQR 421
           WR  GE  C P R
Sbjct: 514 WRETGEAACDPYR 526


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,816
Number of Sequences: 336
Number of extensions: 1209
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)