Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20l19
         (500 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB065914-1|BAC06129.1| 1464|Homo sapiens seven transmembrane hel...    34   0.24 
BC022096-1|AAH22096.1|  112|Homo sapiens urocortin 2 protein.          29   6.9  
BC002647-1|AAH02647.2|  112|Homo sapiens urocortin 2 protein.          29   6.9  
AY819648-1|AAV68501.1|  164|Homo sapiens HCV p7-transregulated p...    29   6.9  
AK128380-1|BAC87408.1|  164|Homo sapiens protein ( Homo sapiens ...    29   6.9  
AF320560-1|AAK52672.1|  112|Homo sapiens stresscopin-related pro...    29   6.9  

>AB065914-1|BAC06129.1| 1464|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 1464

 Score = 34.3 bits (75), Expect = 0.24
 Identities = 18/41 (43%), Positives = 20/41 (48%)
 Frame = +3

Query: 111 SSERSQKTPSSRSEVEINEELQRGSGDDEGTGRRRPGEPLA 233
           +S RS     + S    N   QRG G   G GRRRPG P A
Sbjct: 83  TSSRSGSGSGASSAEAANSHPQRGEGRAPGAGRRRPGPPPA 123


>BC022096-1|AAH22096.1|  112|Homo sapiens urocortin 2 protein.
          Length = 112

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +2

Query: 350 ALKPSASATPTWRLLGELTCHPQRHTRARTNLS 448
           A   S SA PTW    +  C P RH  +R  LS
Sbjct: 43  AASESPSAAPTWPWAAQSHCSPTRHPGSRIVLS 75


>BC002647-1|AAH02647.2|  112|Homo sapiens urocortin 2 protein.
          Length = 112

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +2

Query: 350 ALKPSASATPTWRLLGELTCHPQRHTRARTNLS 448
           A   S SA PTW    +  C P RH  +R  LS
Sbjct: 43  AASESPSAAPTWPWAAQSHCSPTRHPGSRIVLS 75


>AY819648-1|AAV68501.1|  164|Homo sapiens HCV p7-transregulated
           protein 2 protein.
          Length = 164

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = +2

Query: 344 GRALKPS-ASATPTWRLLG-ELTCHPQRHTRAR 436
           G A +PS AS++PTWR  G    C  + HTR R
Sbjct: 115 GSAAEPSTASSSPTWRNTGPNRGCGSKTHTRTR 147


>AK128380-1|BAC87408.1|  164|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46523 fis, clone THYMU3034099. ).
          Length = 164

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = +2

Query: 344 GRALKPS-ASATPTWRLLG-ELTCHPQRHTRAR 436
           G A +PS AS++PTWR  G    C  + HTR R
Sbjct: 115 GSAAEPSTASSSPTWRNTGPNRGCGSKTHTRTR 147


>AF320560-1|AAK52672.1|  112|Homo sapiens stresscopin-related
           protein protein.
          Length = 112

 Score = 29.5 bits (63), Expect = 6.9
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +2

Query: 350 ALKPSASATPTWRLLGELTCHPQRHTRARTNLS 448
           A   S SA PTW    +  C P RH  +R  LS
Sbjct: 43  AASESPSAAPTWPWAAQSHCSPTRHPGSRIVLS 75


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,398,297
Number of Sequences: 237096
Number of extensions: 777667
Number of successful extensions: 2249
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2240
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)