Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20l18
         (638 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF132183-1|AAD34771.1|  834|Drosophila melanogaster unknown prot...    32   0.57 
AE014297-2518|AAF55551.2|  834|Drosophila melanogaster CG18617-P...    32   0.57 
AE014297-2517|AAF55552.2|  834|Drosophila melanogaster CG18617-P...    32   0.57 
U81384-1|AAD00517.1|  717|Drosophila melanogaster dMyc1 protein.       28   9.3  
U77370-1|AAB39842.2|  717|Drosophila melanogaster transcription ...    28   9.3  
AY058627-1|AAL13856.1|  717|Drosophila melanogaster LD32539p pro...    28   9.3  
AL121800-1|CAD24780.1|  717|Drosophila melanogaster EG:BACN5I9.1...    28   9.3  
AF119716-1|AAD17276.1| 1982|Drosophila melanogaster dMi-2 protei...    28   9.3  
AE014298-519|AAF45866.2|  717|Drosophila melanogaster CG10798-PA...    28   9.3  
AE014296-3240|AAX52739.1| 1983|Drosophila melanogaster CG8103-PB...    28   9.3  
AE014296-3239|AAF49099.2| 1982|Drosophila melanogaster CG8103-PA...    28   9.3  

>AF132183-1|AAD34771.1|  834|Drosophila melanogaster unknown
           protein.
          Length = 834

 Score = 32.3 bits (70), Expect = 0.57
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 411 NPRIFQCIYFNVLFFERFSSFMHSNVFVAAVHFMILCKR 295
           NP ++ CI F  LF   F    H  + V    +M+LC+R
Sbjct: 390 NPALYTCITFPFLFAVMFGDLGHGLILVLFGAWMVLCER 428


>AE014297-2518|AAF55551.2|  834|Drosophila melanogaster CG18617-PB,
           isoform B protein.
          Length = 834

 Score = 32.3 bits (70), Expect = 0.57
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 411 NPRIFQCIYFNVLFFERFSSFMHSNVFVAAVHFMILCKR 295
           NP ++ CI F  LF   F    H  + V    +M+LC+R
Sbjct: 390 NPALYTCITFPFLFAVMFGDLGHGLILVLFGAWMVLCER 428


>AE014297-2517|AAF55552.2|  834|Drosophila melanogaster CG18617-PA,
           isoform A protein.
          Length = 834

 Score = 32.3 bits (70), Expect = 0.57
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 411 NPRIFQCIYFNVLFFERFSSFMHSNVFVAAVHFMILCKR 295
           NP ++ CI F  LF   F    H  + V    +M+LC+R
Sbjct: 390 NPALYTCITFPFLFAVMFGDLGHGLILVLFGAWMVLCER 428


>U81384-1|AAD00517.1|  717|Drosophila melanogaster dMyc1 protein.
          Length = 717

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = +1

Query: 481 TKTKSNDRLNNENTSTDYDTEDE-ERVNTFNS--RKRRVVAKRAFNSKSKKIP 630
           T T SN  ++ ++    +D  D  E+ N  N   R+RR+  K  F +  K+IP
Sbjct: 601 TSTSSNSSVHRKDFVLGFDEADTIEKRNQHNDMERQRRIGLKNLFEALKKQIP 653


>U77370-1|AAB39842.2|  717|Drosophila melanogaster transcription
           factor dMyc/dm protein.
          Length = 717

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = +1

Query: 481 TKTKSNDRLNNENTSTDYDTEDE-ERVNTFNS--RKRRVVAKRAFNSKSKKIP 630
           T T SN  ++ ++    +D  D  E+ N  N   R+RR+  K  F +  K+IP
Sbjct: 601 TSTSSNSSVHRKDFVLGFDEADTIEKRNQHNDMERQRRIGLKNLFEALKKQIP 653


>AY058627-1|AAL13856.1|  717|Drosophila melanogaster LD32539p
           protein.
          Length = 717

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = +1

Query: 481 TKTKSNDRLNNENTSTDYDTEDE-ERVNTFNS--RKRRVVAKRAFNSKSKKIP 630
           T T SN  ++ ++    +D  D  E+ N  N   R+RR+  K  F +  K+IP
Sbjct: 601 TSTSSNSSVHRKDFVLGFDEADTIEKRNQHNDMERQRRIGLKNLFEALKKQIP 653


>AL121800-1|CAD24780.1|  717|Drosophila melanogaster
           EG:BACN5I9.1,FBgn0000472;dm protein.
          Length = 717

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = +1

Query: 481 TKTKSNDRLNNENTSTDYDTEDE-ERVNTFNS--RKRRVVAKRAFNSKSKKIP 630
           T T SN  ++ ++    +D  D  E+ N  N   R+RR+  K  F +  K+IP
Sbjct: 601 TSTSSNSSVHRKDFVLGFDEADTIEKRNQHNDMERQRRIGLKNLFEALKKQIP 653


>AF119716-1|AAD17276.1| 1982|Drosophila melanogaster dMi-2 protein
           protein.
          Length = 1982

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
 Frame = +1

Query: 250 YNEKMPPRAKKLFVEAFTKYHKMNGGDEDIAM--HKARKALEEKYVKINTLKNSWI 411
           Y+ + PP+ ++   EA T+Y ++    + + M  +   + LEE++ K N +K  W+
Sbjct: 558 YDMEEPPKFEESLDEADTRYKRIQRHKDKVGMKANDDAEVLEERFYK-NGVKPEWL 612


>AE014298-519|AAF45866.2|  717|Drosophila melanogaster CG10798-PA
           protein.
          Length = 717

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = +1

Query: 481 TKTKSNDRLNNENTSTDYDTEDE-ERVNTFNS--RKRRVVAKRAFNSKSKKIP 630
           T T SN  ++ ++    +D  D  E+ N  N   R+RR+  K  F +  K+IP
Sbjct: 601 TSTSSNSSVHRKDFVLGFDEADTIEKRNQHNDMERQRRIGLKNLFEALKKQIP 653


>AE014296-3240|AAX52739.1| 1983|Drosophila melanogaster CG8103-PB,
           isoform B protein.
          Length = 1983

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
 Frame = +1

Query: 250 YNEKMPPRAKKLFVEAFTKYHKMNGGDEDIAM--HKARKALEEKYVKINTLKNSWI 411
           Y+ + PP+ ++   EA T+Y ++    + + M  +   + LEE++ K N +K  W+
Sbjct: 559 YDMEEPPKFEESLDEADTRYKRIQRHKDKVGMKANDDAEVLEERFYK-NGVKPEWL 613


>AE014296-3239|AAF49099.2| 1982|Drosophila melanogaster CG8103-PA,
           isoform A protein.
          Length = 1982

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
 Frame = +1

Query: 250 YNEKMPPRAKKLFVEAFTKYHKMNGGDEDIAM--HKARKALEEKYVKINTLKNSWI 411
           Y+ + PP+ ++   EA T+Y ++    + + M  +   + LEE++ K N +K  W+
Sbjct: 558 YDMEEPPKFEESLDEADTRYKRIQRHKDKVGMKANDDAEVLEERFYK-NGVKPEWL 612


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,266,197
Number of Sequences: 53049
Number of extensions: 338385
Number of successful extensions: 987
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)