Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20l17
(616 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62906 Cluster: 60S ribosomal protein L10a; n=212; Euka... 257 2e-67
UniRef50_A2WX71 Cluster: Putative uncharacterized protein; n=2; ... 190 3e-47
UniRef50_Q9UVJ4 Cluster: 60S ribosomal protein L10a; n=8; Ascomy... 182 6e-45
UniRef50_UPI00005A509E Cluster: PREDICTED: similar to ribosomal ... 154 2e-36
UniRef50_Q22UX9 Cluster: L1P family of ribosomal proteins contai... 152 6e-36
UniRef50_UPI00005A03AD Cluster: PREDICTED: similar to ribosomal ... 143 3e-33
UniRef50_A0CRX7 Cluster: Chromosome undetermined scaffold_253, w... 139 4e-32
UniRef50_UPI0000E49458 Cluster: PREDICTED: similar to Rpl10a-pro... 134 2e-30
UniRef50_A2F0R8 Cluster: Ribosomal protein L10a; n=4; Trichomona... 123 3e-27
UniRef50_Q76KS4 Cluster: Ribosomal protein L10a; n=2; Giardia in... 119 6e-26
UniRef50_O15613 Cluster: 60S ribosomal protein L10a; n=1; Entamo... 119 6e-26
UniRef50_Q01AT5 Cluster: Chromosome 04 contig 1, DNA sequence; n... 115 8e-25
UniRef50_UPI00005A4EEC Cluster: PREDICTED: similar to ribosomal ... 105 6e-22
UniRef50_Q3LW91 Cluster: Ribosomal protein 10a; n=1; Bigelowiell... 105 1e-21
UniRef50_UPI00005A268C Cluster: PREDICTED: similar to ribosomal ... 93 4e-18
UniRef50_UPI0000F33BDC Cluster: UPI0000F33BDC related cluster; n... 89 8e-17
UniRef50_Q018L4 Cluster: RL10A_CHLRE 60S ribosomal protein L10a;... 89 1e-16
UniRef50_Q971J1 Cluster: 50S ribosomal protein L1P; n=5; Sulfolo... 59 9e-08
UniRef50_Q6E4P9 Cluster: 60S ribosomal protein L10a; n=1; Antono... 57 3e-07
UniRef50_A7D0Q4 Cluster: Ribosomal protein L1; n=1; Halorubrum l... 51 2e-05
UniRef50_Q8PY52 Cluster: 50S ribosomal protein L1P; n=7; Archaea... 49 8e-05
UniRef50_A3BCJ7 Cluster: Ribosomal protein L1; n=5; Oryza sativa... 48 2e-04
UniRef50_O28782 Cluster: 50S ribosomal protein L1P; n=3; Archaea... 48 2e-04
UniRef50_Q9Y9W6 Cluster: 50S ribosomal protein L1P; n=1; Aeropyr... 47 4e-04
UniRef50_Q97BN2 Cluster: 50S ribosomal protein L1P; n=4; Thermop... 44 0.004
UniRef50_Q8SRY5 Cluster: 60S RIBOSOMAL PROTEIN L10A; n=1; Enceph... 43 0.005
UniRef50_P13575 Cluster: 50S ribosomal protein L1P; n=5; Euryarc... 41 0.020
UniRef50_Q5CLP4 Cluster: At2g42650/F14N22.8; n=2; Cryptosporidiu... 40 0.047
UniRef50_O27716 Cluster: 50S ribosomal protein L1P; n=3; Methano... 40 0.047
UniRef50_Q9ZE23 Cluster: 50S ribosomal protein L1; n=7; Bacteria... 36 0.77
UniRef50_Q0AYI8 Cluster: Translation initiation factor IF-2; n=1... 35 1.3
UniRef50_A2Y3N8 Cluster: DNA primase; n=4; Oryza sativa|Rep: DNA... 35 1.3
UniRef50_Q92J89 Cluster: 50S ribosomal protein L1; n=8; Alphapro... 35 1.3
UniRef50_Q00XM9 Cluster: LSU ribosomal protein L1P; n=1; Ostreoc... 35 1.8
UniRef50_UPI0000ECD0EF Cluster: CDNA FLJ31980 fis, clone NT2RP70... 33 4.1
UniRef50_Q9FJ26 Cluster: DNA primase; n=1; Arabidopsis thaliana|... 33 4.1
UniRef50_A4R562 Cluster: Putative uncharacterized protein; n=1; ... 33 4.1
UniRef50_Q5QZU9 Cluster: Methyl-accepting chemotaxis protein; n=... 33 5.4
UniRef50_Q3KPN0 Cluster: LOC733385 protein; n=2; Xenopus laevis|... 32 9.4
UniRef50_A3XWB4 Cluster: Putative uncharacterized protein; n=3; ... 32 9.4
>UniRef50_P62906 Cluster: 60S ribosomal protein L10a; n=212;
Eukaryota|Rep: 60S ribosomal protein L10a - Homo sapiens
(Human)
Length = 217
Score = 257 bits (629), Expect = 2e-67
Identities = 124/189 (65%), Positives = 139/189 (73%)
Frame = +2
Query: 50 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPR 229
MSSKVSRDTLYE V VL ++ K+R FLETVELQI LKNYDPQKDKRFSGTV+LK PR
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPR 60
Query: 230 PKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQI 409
PK VCVLGDQQHCDEAK +++P M SESLIKQI
Sbjct: 61 PKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQI 120
Query: 410 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELA 589
PR+LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKKVLCL+VAVGHV MT DEL
Sbjct: 121 PRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELV 180
Query: 590 QNVHLSINF 616
N+HL++NF
Sbjct: 181 YNIHLAVNF 189
>UniRef50_A2WX71 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 238
Score = 190 bits (462), Expect = 3e-47
Identities = 98/209 (46%), Positives = 130/209 (62%), Gaps = 22/209 (10%)
Frame = +2
Query: 56 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 235
SK+ D L E ++ + S++K+R F+ET+ELQIGLKNYDPQKDKRFSG+VKL +IPRPK
Sbjct: 2 SKLQSDALREAISQITSESREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61
Query: 236 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPR 415
M+VC+LGD QH +EA+ + + M SE++IKQIPR
Sbjct: 62 MKVCMLGDAQHVEEAEKMGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121
Query: 416 LLGPGLNKA----------------------GKFPGLLSHQESMTQKIDEVKGTIKFQMK 529
LLGPGLNKA GKFP L++HQES+ K++E K T+KFQ+K
Sbjct: 122 LLGPGLNKAGKILLVYGRSILKSSYIIVSKRGKFPTLVTHQESLESKVNETKATVKFQLK 181
Query: 530 KVLCLSVAVGHVDMTPDELAQNVHLSINF 616
KVLC+ VAVG+ M ++ QNV +S+NF
Sbjct: 182 KVLCMGVAVGNCAMEEKQIFQNVQMSVNF 210
>UniRef50_Q9UVJ4 Cluster: 60S ribosomal protein L10a; n=8;
Ascomycota|Rep: 60S ribosomal protein L10a - Candida
albicans (Yeast)
Length = 217
Score = 182 bits (443), Expect = 6e-45
Identities = 93/188 (49%), Positives = 120/188 (63%), Gaps = 1/188 (0%)
Frame = +2
Query: 56 SKVSRDTLYECVNAVLQ-SSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRP 232
SK++ + E V+ +L+ S++ KKRNFLETVELQ+GLKNYDPQ+DKRFSGT+KL +PRP
Sbjct: 2 SKITSSGVREYVHKLLEYSTETKKRNFLETVELQVGLKNYDPQRDKRFSGTLKLPQVPRP 61
Query: 233 KMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIP 412
M C+ GD D AK+L V M SE LIKQIP
Sbjct: 62 NMTTCIFGDAFDFDRAKSLGVDAMSVDDLKKLNKNKKLIKKLAKKYNAFIASEVLIKQIP 121
Query: 413 RLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQ 592
RLLG L+KAG+FP +SH + + K+ +VK TIKFQ+KKVLCL+VAVG+VDM D L
Sbjct: 122 RLLGRTLSKAGQFPTPVSHNDDLYSKVTDVKSTIKFQLKKVLCLAVAVGNVDMEEDVLVN 181
Query: 593 NVHLSINF 616
+ ++ NF
Sbjct: 182 QIMMAANF 189
>UniRef50_UPI00005A509E Cluster: PREDICTED: similar to ribosomal
protein L10a; n=2; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L10a - Canis
familiaris
Length = 268
Score = 154 bits (373), Expect = 2e-36
Identities = 79/158 (50%), Positives = 98/158 (62%)
Frame = +2
Query: 143 VELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCMXXXXXX 322
V LQI L+N D Q D+RFSGT++LK+ PR K +CVLGDQQHCDEAK + +P M
Sbjct: 13 VLLQISLQNSDSQTDRRFSGTIRLKFTPRLKFSICVLGDQQHCDEAKAVVIPRMNTEALK 72
Query: 323 XXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEV 502
ESL+ QI LGP LNKAGKFP +H +++ K+D+V
Sbjct: 73 KLNKNKKLFKKLAKKFDAFLALESLVLQI---LGPDLNKAGKFPSSKTHVKNIVAKMDDV 129
Query: 503 KGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINF 616
K IK Q+KKVLCL VAVGHV MT DEL N+ L++NF
Sbjct: 130 KFMIKLQIKKVLCLPVAVGHVKMTDDELVYNIQLAVNF 167
>UniRef50_Q22UX9 Cluster: L1P family of ribosomal proteins
containing protein; n=9; Eukaryota|Rep: L1P family of
ribosomal proteins containing protein - Tetrahymena
thermophila SB210
Length = 215
Score = 152 bits (369), Expect = 6e-36
Identities = 72/187 (38%), Positives = 115/187 (61%)
Frame = +2
Query: 56 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 235
SK+S + L + +L S KKR F ETVELQIGL++Y+P KDKRF+G++KL +P P
Sbjct: 2 SKISSEFLKNTITQML--SDRKKREFTETVELQIGLRDYNPDKDKRFTGSIKLPNMPYPN 59
Query: 236 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPR 415
++ ++G +HC+EAK + C+ SE+L+KQ+P+
Sbjct: 60 KKIAIIGTMRHCEEAKAAGIACIDTEGLKKFNKEPKLIKKWFKPYDTLLCSETLMKQLPK 119
Query: 416 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQN 595
L G L+K GKFP ++ ES+ K+ E++ T++FQ+KKV+CL+ AV +T +++ QN
Sbjct: 120 LCGNVLSKIGKFPISITEGESVVAKVKELQSTVRFQLKKVVCLATAVATDALTEEQIRQN 179
Query: 596 VHLSINF 616
+++S+NF
Sbjct: 180 INMSLNF 186
>UniRef50_UPI00005A03AD Cluster: PREDICTED: similar to ribosomal
protein L10a; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L10a - Canis
familiaris
Length = 303
Score = 143 bits (347), Expect = 3e-33
Identities = 76/149 (51%), Positives = 91/149 (61%)
Frame = +2
Query: 5 LQLPSVVIGGSLTNKMSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQK 184
L+L V++ G ++ + S T VL ++ K+R FLETVELQI LKNYDPQK
Sbjct: 152 LELEGVMLRGVSQSEKDTAKSPATPCRRRYEVLHGNQRKRRKFLETVELQITLKNYDPQK 211
Query: 185 DKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXX 364
DKRFSGTV+LK P PK VCV+GDQQHCDEAK +++P M
Sbjct: 212 DKRFSGTVRLKSTPCPKFSVCVVGDQQHCDEAKAVDIPHMDIEMLKKLNKNKKLVKKLAK 271
Query: 365 XXXXXXXSESLIKQIPRLLGPGLNKAGKF 451
SESLIKQIPR+LGPGLNKAGKF
Sbjct: 272 KYDAFLASESLIKQIPRILGPGLNKAGKF 300
>UniRef50_A0CRX7 Cluster: Chromosome undetermined scaffold_253,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_253,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 239
Score = 139 bits (337), Expect = 4e-32
Identities = 73/187 (39%), Positives = 109/187 (58%)
Frame = +2
Query: 56 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 235
SK+ + L + ++ +L ++ KKRNF ET ELQI L++YD QKDKRF G+ +L + P P
Sbjct: 26 SKLQGEQLKKYIHEML--TERKKRNFKETTELQIQLRDYDVQKDKRFQGSTRLLHAPYPN 83
Query: 236 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPR 415
+++ V+G+ HCD+AK L + + SESL+K IPR
Sbjct: 84 IKIGVIGNLTHCDQAKALGLTAIDQDGLKKFNKEKKPIKKWCKPFDILIASESLMKVIPR 143
Query: 416 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQN 595
L+G K GKFP + ES++ K++EVK ++KFQ+K L L A G +M+ D+L QN
Sbjct: 144 LVGNVFTKIGKFPIAIPETESVSSKVNEVKSSVKFQLKNTLSLGTAFGTDEMSEDQLRQN 203
Query: 596 VHLSINF 616
+ +INF
Sbjct: 204 LSTTINF 210
>UniRef50_UPI0000E49458 Cluster: PREDICTED: similar to Rpl10a-prov
protein, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to Rpl10a-prov
protein, partial - Strongylocentrotus purpuratus
Length = 155
Score = 134 bits (324), Expect = 2e-30
Identities = 59/82 (71%), Positives = 67/82 (81%)
Frame = +2
Query: 59 KVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKM 238
KVSRD LYE V V SK+KKR FLET+ELQ+ LKNYDPQKDKRFSGTVKL++IPRPK
Sbjct: 1 KVSRDLLYEAVKEVQNGSKEKKRKFLETIELQVNLKNYDPQKDKRFSGTVKLRHIPRPKF 60
Query: 239 QVCVLGDQQHCDEAKTLNVPCM 304
+C+LGDQQH DEAK +PCM
Sbjct: 61 SMCILGDQQHLDEAKANGIPCM 82
Score = 47.2 bits (107), Expect = 3e-04
Identities = 19/31 (61%), Positives = 27/31 (87%)
Frame = +2
Query: 524 MKKVLCLSVAVGHVDMTPDELAQNVHLSINF 616
+KKVLCL+VAVGHV+M ++L N++L+INF
Sbjct: 97 VKKVLCLAVAVGHVEMDEEDLVSNINLAINF 127
>UniRef50_A2F0R8 Cluster: Ribosomal protein L10a; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L10a - Trichomonas
vaginalis G3
Length = 215
Score = 123 bits (297), Expect = 3e-27
Identities = 61/183 (33%), Positives = 105/183 (57%)
Frame = +2
Query: 68 RDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVC 247
++TL + + VL+ +K KKR FLETV++Q+ LK Y+ KDKRF G++KL +I RP +++
Sbjct: 6 QETLQKAIKDVLEGAKTKKRGFLETVDIQLKLKGYNVSKDKRFVGSIKLPHIIRPNVRIG 65
Query: 248 VLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGP 427
VLG++ HC+EA+ LN+P S +I Q+ ++LG
Sbjct: 66 VLGNKVHCEEAQKLNIPAYDLPTLTNFNKEKKVVKAWTKRHHLFLASPDVIGQVNKVLGQ 125
Query: 428 GLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLS 607
+A KFP + +++ + +DEVK T ++KK + + +G+V+MT ++ +N+ L
Sbjct: 126 VYTRANKFPTNIK-TDTVAKVVDEVKRTANIRLKKSVAFGIPIGNVNMTERQVFENLTLC 184
Query: 608 INF 616
N+
Sbjct: 185 TNY 187
>UniRef50_Q76KS4 Cluster: Ribosomal protein L10a; n=2; Giardia
intestinalis|Rep: Ribosomal protein L10a - Giardia
lamblia (Giardia intestinalis)
Length = 221
Score = 119 bits (286), Expect = 6e-26
Identities = 64/187 (34%), Positives = 103/187 (55%), Gaps = 1/187 (0%)
Frame = +2
Query: 59 KVSRDTLYECVNAVLQ-SSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 235
+++ + L + + +++ ++ +K R FLETVELQ+GLK YDP+KD RF+ + L +I +
Sbjct: 7 RINPEALNKHIAEIIERATNEKPRKFLETVELQVGLKGYDPKKDPRFNLPLVLPHIAKQN 66
Query: 236 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPR 415
+++CV+ D + D AK L + + S+SLI+QI
Sbjct: 67 LKLCVIADARDADRAKKLGLNYVEIEHLQQFNKDAKQIKKFAKSYDVFLASKSLIRQITV 126
Query: 416 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQN 595
GPG KAG+ P L+ E + K+ E K TIK Q KK + L+ +G+V M E+AQN
Sbjct: 127 YAGPGFTKAGRTPLPLAPDEDLELKVLECKSTIKVQFKKAVGLNWPIGNVKMPASEIAQN 186
Query: 596 VHLSINF 616
+ ++NF
Sbjct: 187 IMTTLNF 193
>UniRef50_O15613 Cluster: 60S ribosomal protein L10a; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L10a - Entamoeba
histolytica
Length = 165
Score = 119 bits (286), Expect = 6e-26
Identities = 68/171 (39%), Positives = 94/171 (54%)
Frame = +2
Query: 53 SSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRP 232
SS VSR + V +L+ K++K F ET EL + LKNYDP KDKR GT KL + +
Sbjct: 1 SSAVSR----QGVATILKEKKERK--FGETGELHLALKNYDPDKDKRCGGTDKLPNVTKA 54
Query: 233 KMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIP 412
+VCVLGD Q C+ A+ N+P M S+S+ +Q+
Sbjct: 55 NYKVCVLGDAQACEAAQKENIPHMDVDALKALYKDKMFFKKLARKYNTFLGSDSVGRQLQ 114
Query: 413 RLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHV 565
++LGPGLNK GKFP L E + KI+E++ + Q+KKVLC+ V G+V
Sbjct: 115 KILGPGLNKGGKFPPPLGKNEDLKVKINELQCQVNSQLKKVLCMGVGGGNV 165
>UniRef50_Q01AT5 Cluster: Chromosome 04 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 04 contig 1, DNA
sequence - Ostreococcus tauri
Length = 175
Score = 115 bits (277), Expect = 8e-25
Identities = 65/138 (47%), Positives = 73/138 (52%)
Frame = -2
Query: 585 SSSGVMSTWPTATERHNTFFIWNLMVPLTSSIFCVMDSWWERRPGNLPALFKPGPNKRGI 406
+S V+S WPTAT + TF WNL+ LTS I DS GNLPALFKPGP +RGI
Sbjct: 38 NSFSVISMWPTATAKQRTFLSWNLIWDLTSLILLSRDSLCVASVGNLPALFKPGPKRRGI 97
Query: 405 CLISDSDARKXXXXXXXXXXXXXXXXXXXXXXXSIHGTFKVLASSQCCWSPRTQTCIFGR 226
CLI+DSDARK S+ ASSQC SP FGR
Sbjct: 98 CLITDSDARKCWYFFASFLMSFLFLLSFLSASTSMESMPLPAASSQCLASPSMHILSFGR 157
Query: 225 GMYFSFTVPEKRLSFCGS 172
G+ TVP KRLSFCGS
Sbjct: 158 GITGRLTVPLKRLSFCGS 175
>UniRef50_UPI00005A4EEC Cluster: PREDICTED: similar to ribosomal
protein L10a; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L10a - Canis
familiaris
Length = 205
Score = 105 bits (253), Expect = 6e-22
Identities = 45/69 (65%), Positives = 57/69 (82%)
Frame = +2
Query: 410 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELA 589
P++L PGLNKAGKFP LL+H E+M K+DEVK TIKFQMK +LCL+VA+G + MT DEL
Sbjct: 110 PQILDPGLNKAGKFPSLLTHSENMVAKVDEVKSTIKFQMKNMLCLAVAIGPMKMTDDELV 169
Query: 590 QNVHLSINF 616
N+HL++NF
Sbjct: 170 YNIHLAVNF 178
Score = 53.2 bits (122), Expect = 5e-06
Identities = 29/62 (46%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +2
Query: 50 MSSKVSRDTLYEC-VNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIP 226
M +K S +C V VLQ ++ K LE VELQI LK YD KD+ F GT++LK P
Sbjct: 25 MGAKKSLRQQCDCGVREVLQGNQPKNWQCLERVELQISLKKYDAVKDRHFLGTIRLKSTP 84
Query: 227 RP 232
P
Sbjct: 85 SP 86
>UniRef50_Q3LW91 Cluster: Ribosomal protein 10a; n=1; Bigelowiella
natans|Rep: Ribosomal protein 10a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 216
Score = 105 bits (251), Expect = 1e-21
Identities = 57/167 (34%), Positives = 87/167 (52%)
Frame = +2
Query: 116 DKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNV 295
+KKRNF+E VEL LK+ + +K K+ SG VKL + PR +++C+L DQ+H EAK L +
Sbjct: 22 NKKRNFIEKVELNFSLKSINFKKHKKISGGVKLPFGPRRAVKICMLADQRHITEAKNLGL 81
Query: 296 PCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGPGLNKAGKFPGLLSHQE 475
+ SESLIK IPR LGP L K GKFP ++
Sbjct: 82 YYLDINQIKLLKNKKKVLKKLVKKFEVFIASESLIKIIPRYLGPALAKVGKFPFSITSTI 141
Query: 476 SMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINF 616
+T++I + +K +K V VG + M +++ +N + ++F
Sbjct: 142 PITEQIKLILKEVKINFRKNFSTGVVVGDLRMAQEKVTENAKIVVSF 188
>UniRef50_UPI00005A268C Cluster: PREDICTED: similar to ribosomal
protein L10a isoform 4; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L10a isoform 4 -
Canis familiaris
Length = 105
Score = 93.5 bits (222), Expect = 4e-18
Identities = 49/90 (54%), Positives = 59/90 (65%), Gaps = 6/90 (6%)
Frame = +2
Query: 50 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKL-KYIP 226
MSSKVSRDTLYE V VL ++ K+R FLETVELQI LKNYDPQKDKRFSGTV+L + P
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLAPFCP 60
Query: 227 RPKMQVCVLGDQQHCD-----EAKTLNVPC 301
P ++ G + A+ + PC
Sbjct: 61 HPALRALPPGPPVELEAGGHGRARAVQTPC 90
>UniRef50_UPI0000F33BDC Cluster: UPI0000F33BDC related cluster; n=1;
Bos taurus|Rep: UPI0000F33BDC UniRef100 entry - Bos
Taurus
Length = 172
Score = 89.0 bits (211), Expect = 8e-17
Identities = 59/154 (38%), Positives = 81/154 (52%)
Frame = -1
Query: 595 ILSKLIRSHVHMANCYRKTQHLLHLELNGSLDFINLLRHGLLVGEKTREFTSFVQTGTQQ 416
++ LI +AN + +TQHLLHLEL+G L IN L+VG++ RE VQ Q
Sbjct: 22 VVHNLIICRRQVANSHCQTQHLLHLELDGGLHLINFGHRVLIVGQQGRELARLVQAWAQD 81
Query: 415 TGNLLDQ*L*CQESIKFFGQFLDKLFVLIQFFQSLSIHTWHIQGFSLVTMLLVSKNANLH 236
+ +LLDQ L ++ I GQ LD+ VL++F Q H I T+LLV ++ +
Sbjct: 82 SWDLLDQRLGSRKGIILLGQLLDQFLVLVEFPQ---CHVGDIHSLGFFTVLLVPQDTHGE 138
Query: 235 FRPRYVF*LYSAGETLVLLWVIVLQTNLKLYSLQ 134
F A E VLL VI LQ +LK + LQ
Sbjct: 139 FGAGSGLKPDGAQEIFVLLRVIGLQADLKHHHLQ 172
>UniRef50_Q018L4 Cluster: RL10A_CHLRE 60S ribosomal protein L10a;
n=1; Ostreococcus tauri|Rep: RL10A_CHLRE 60S ribosomal
protein L10a - Ostreococcus tauri
Length = 134
Score = 88.6 bits (210), Expect = 1e-16
Identities = 41/60 (68%), Positives = 49/60 (81%)
Frame = +2
Query: 53 SSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRP 232
S K++ DTL E V+ +L+ SK+K R F+ETVELQIGLKNYDPQKDKRF+GTV L IPRP
Sbjct: 74 SGKLNTDTLKEGVSFILEKSKEKPRKFVETVELQIGLKNYDPQKDKRFNGTVNLPVIPRP 133
>UniRef50_Q971J1 Cluster: 50S ribosomal protein L1P; n=5;
Sulfolobaceae|Rep: 50S ribosomal protein L1P -
Sulfolobus tokodaii
Length = 222
Score = 58.8 bits (136), Expect = 9e-08
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 3/186 (1%)
Frame = +2
Query: 65 SRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDK-RFSGTVKLKYIPRPKMQ 241
S+D+L E + L + KRNF ++VEL + K D +K + + V L P +
Sbjct: 7 SKDSLVEALKVALNPENNPKRNFTQSVELIVTFKGIDMKKGELKLREIVPLPKEPSKPRK 66
Query: 242 VCVLGDQQHCDEAKTL--NVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPR 415
V V+ Q + AK NV +S+ + R
Sbjct: 67 VLVIPAFQQIESAKKAEPNVLLTKEELQKLQGQKRAIKKLARQNDWFLVAQDSMAL-VGR 125
Query: 416 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQN 595
+LGP L GKFP L + +T+ I K + + K + V +G DM P++LA+N
Sbjct: 126 ILGPALGPRGKFPTPLPNAADITEYILRFKRSTLVKTKDQPHVQVFIGTEDMKPEDLAEN 185
Query: 596 VHLSIN 613
+N
Sbjct: 186 ALAVLN 191
>UniRef50_Q6E4P9 Cluster: 60S ribosomal protein L10a; n=1;
Antonospora locustae|Rep: 60S ribosomal protein L10a -
Antonospora locustae (Nosema locustae)
Length = 211
Score = 57.2 bits (132), Expect = 3e-07
Identities = 39/160 (24%), Positives = 74/160 (46%)
Frame = +2
Query: 137 ETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCMXXXX 316
ET+E+Q+ LK YD ++DK+F G+V L + R +V V+GD+ + AK +P +
Sbjct: 25 ETMEVQVCLKGYDLKRDKKFDGSVVLPFQKRKNERVLVVGDRNLEEMAKEAGLPFVLYDD 84
Query: 317 XXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKID 496
+ + + + K F + ++ + D
Sbjct: 85 VAGKTKEKKTMKKKFAENYHAVITTNTFHKYFEIAFLN-RKRTPFYIFDPNGGNLKKFHD 143
Query: 497 EVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINF 616
EV T+KF++++ +S VG ++M P E++QN+ ++F
Sbjct: 144 EVLRTVKFKLRQTNVVSFPVGTLEMNPAEISQNIRTGLDF 183
>UniRef50_A7D0Q4 Cluster: Ribosomal protein L1; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein L1 -
Halorubrum lacusprofundi ATCC 49239
Length = 238
Score = 51.2 bits (117), Expect = 2e-05
Identities = 40/181 (22%), Positives = 71/181 (39%), Gaps = 1/181 (0%)
Frame = +2
Query: 71 DTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYD-PQKDKRFSGTVKLKYIPRPKMQVC 247
DT+ E V L + + RNF ETV++ I L++ D R +V L + Q+
Sbjct: 29 DTIQEAVTLALDDAPE--RNFRETVDIAINLRDLDLNDPSNRIDESVVLPAGTGQETQIV 86
Query: 248 VLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGP 427
V + + A+ + + +L++ I R LG
Sbjct: 87 VFAEGETAVRAQEVADQVLDSDDLEDLGDDDDRAKDLADETDFFVAEANLMQDIGRYLGT 146
Query: 428 GLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLS 607
L GK P L + + ++ +K T++ + + VG DM PD ++ N+ +
Sbjct: 147 VLGPRGKMPTPLQPDDDIVDTVNRMKNTVQLRSRDRRTFHTRVGAEDMGPDAISDNIDVI 206
Query: 608 I 610
I
Sbjct: 207 I 207
>UniRef50_Q8PY52 Cluster: 50S ribosomal protein L1P; n=7;
Archaea|Rep: 50S ribosomal protein L1P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 213
Score = 49.2 bits (112), Expect = 8e-05
Identities = 46/177 (25%), Positives = 73/177 (41%), Gaps = 2/177 (1%)
Frame = +2
Query: 74 TLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDK-RFSGTVKLKYIPRPKMQVCV 250
T+ E V V++ S KRNF E+V+L I LKN D + K R V L + ++++ V
Sbjct: 5 TILEAVKKVIEESP--KRNFSESVDLAINLKNLDMNQPKNRVDEEVILPHGLGKELKIGV 62
Query: 251 LGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSES-LIKQIPRLLGP 427
AK + +E+ + I + LG
Sbjct: 63 FAKGDVGLRAKAAGAAYVISDVELEELAADKNKARVLANECDLFIAETQFMPIIGKNLGI 122
Query: 428 GLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNV 598
L GK P L + + + I + +K + K L VAVG +M PD+L++N+
Sbjct: 123 VLGPRGKMPIPLMPNKDIGELIQSKQNAVKLRSKDRLTFHVAVGRRNMNPDDLSENI 179
>UniRef50_A3BCJ7 Cluster: Ribosomal protein L1; n=5; Oryza
sativa|Rep: Ribosomal protein L1 - Oryza sativa subsp.
japonica (Rice)
Length = 392
Score = 48.0 bits (109), Expect = 2e-04
Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 2/186 (1%)
Frame = +2
Query: 47 KMSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQK-DKRFSGTVKLKYI 223
K KV+ D L + + + S+ +KKRNF ETVE + L DP++ D+ G + L +
Sbjct: 177 KRPQKVAID-LVDAIREIKTSANEKKRNFTETVEAHVML-GVDPRRGDQMVRGALTLPHG 234
Query: 224 PRPKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIK 403
++V V + DEA+ + L K
Sbjct: 235 TGKTVRVAVFAEGPAADEARAAGADVVGGDELIEEIRTGGGKLSFDKCIATPMYMPRLSK 294
Query: 404 QIPRLLGP-GLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPD 580
+ R+LGP GL K G +++ S K + G + F++ K + V +G ++ + +
Sbjct: 295 -VARILGPRGLMPNPKL-GSVTNDVSGAVKAAK-SGRVDFKIDKTAIVHVGLGKINFSDE 351
Query: 581 ELAQNV 598
L +N+
Sbjct: 352 NLRENI 357
>UniRef50_O28782 Cluster: 50S ribosomal protein L1P; n=3;
Archaea|Rep: 50S ribosomal protein L1P - Archaeoglobus
fulgidus
Length = 215
Score = 48.0 bits (109), Expect = 2e-04
Identities = 40/181 (22%), Positives = 77/181 (42%), Gaps = 3/181 (1%)
Frame = +2
Query: 62 VSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQK-DKRFSGTVKLKY-IPRPK 235
V +D L + + +++ K KR F+ETVE+ + L+N D +K + R V L + + +P+
Sbjct: 3 VDKDKLVKSIEEAIKNGK--KRRFVETVEMAVNLRNVDMKKPENRIDTVVNLPHGLGKPR 60
Query: 236 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSES-LIKQIP 412
++ V +AK + +E+ L+ +I
Sbjct: 61 -KIGVFAKGDTALKAKEAGADVVITPEEIDELAKDKRRAKKLANSIDFFIAEAPLMPEIG 119
Query: 413 RLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQ 592
R LGP L GK P + ID ++ ++K + + +G +M +++A+
Sbjct: 120 RKLGPVLGPRGKIPQPIPPLADPKPFIDRLRNSVKIRTRDKTTFHAPIGSENMDVEKIAE 179
Query: 593 N 595
N
Sbjct: 180 N 180
>UniRef50_Q9Y9W6 Cluster: 50S ribosomal protein L1P; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L1P - Aeropyrum pernix
Length = 217
Score = 46.8 bits (106), Expect = 4e-04
Identities = 41/183 (22%), Positives = 75/183 (40%), Gaps = 1/183 (0%)
Frame = +2
Query: 50 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDK-RFSGTVKLKYIP 226
MS + ++ E ++ L+ + K+ F ++VE+ + LK+ D + + R TV L P
Sbjct: 1 MSQETVLASIEEAIDKSLKLGRGKR--FKQSVEIIVALKDIDLKSPQARIRETVFLPNRP 58
Query: 227 RPKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQ 406
+ +VCV+ +AK V + L+
Sbjct: 59 PKEAKVCVVAHGDMELQAKEAGVEVLNRQDLQNLSQNKREVKKLARRCYWVLVRADLMGL 118
Query: 407 IPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDEL 586
R+LGP L GK P + ++ I+ K + +++ + +G DM+P EL
Sbjct: 119 AGRILGPALGPRGKAPVPVPPNANIKDLIERYKAAVWVRIRNQPQVMARIGTEDMSPREL 178
Query: 587 AQN 595
A+N
Sbjct: 179 AEN 181
>UniRef50_Q97BN2 Cluster: 50S ribosomal protein L1P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L1P -
Thermoplasma volcanium
Length = 217
Score = 43.6 bits (98), Expect = 0.004
Identities = 42/178 (23%), Positives = 71/178 (39%), Gaps = 1/178 (0%)
Frame = +2
Query: 83 ECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDK-RFSGTVKLKYIPRPKMQVCVLGD 259
+ V AV QSS +K F E+VE+ I LK+ D K R + + L ++V + G
Sbjct: 8 KAVEAVKQSSPQRK--FEESVEIAINLKDIDMTNPKNRINEEILLPNGRGKDVKVVIFGS 65
Query: 260 QQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGPGLNK 439
++ +AK + +L+ I + LG L
Sbjct: 66 EELKAKAKGVADYIFGPEDISKFAEDKKAFKKIVNDAYFFIAEATLMANIGKSLGQVLGP 125
Query: 440 AGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSIN 613
GK P + + I +K T+K + + L L V VG M ++++N+ +N
Sbjct: 126 RGKMPRPIPPGQDPVPLIKALKNTVKARSRNSLTLHVPVGTRSMDTQKISENIMAILN 183
>UniRef50_Q8SRY5 Cluster: 60S RIBOSOMAL PROTEIN L10A; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L10A
- Encephalitozoon cuniculi
Length = 219
Score = 43.2 bits (97), Expect = 0.005
Identities = 35/172 (20%), Positives = 73/172 (42%), Gaps = 2/172 (1%)
Frame = +2
Query: 101 LQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEA 280
L+ S+D ++ + T+++Q+ LK +DP+KD + S + L Y R + V+ D+ H
Sbjct: 25 LKESEDPEK--IVTIQIQVNLKGFDPRKDNKVSKDMVLPYRVRSLDKTIVIADEAHVKVC 82
Query: 281 KTLNVPCM-XXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGPGLNKAGKFPG 457
N+P + + I Q+ +L + GK P
Sbjct: 83 IDANLPYVPIDEISGDDKKDIRESVLKKNKFFILCPGYNKIYQLKNIL-----RCGKTPH 137
Query: 458 LLSHQESMTQKIDEVKGTIKFQMKKVLCL-SVAVGHVDMTPDELAQNVHLSI 610
+L + + + + K + K +++ + S VGH M + + +N+ + +
Sbjct: 138 ILRNGDDINAVFETGKKSCKLRIQDDFSVTSFTVGHTGMDSEHIYENIKVGM 189
>UniRef50_P13575 Cluster: 50S ribosomal protein L1P; n=5;
Euryarchaeota|Rep: 50S ribosomal protein L1P -
Halobacterium salinarium (Halobacterium halobium)
Length = 212
Score = 41.1 bits (92), Expect = 0.020
Identities = 35/170 (20%), Positives = 66/170 (38%), Gaps = 2/170 (1%)
Frame = +2
Query: 95 AVLQSSKDK-KRNFLETVELQIGLKNYD-PQKDKRFSGTVKLKYIPRPKMQVCVLGDQQH 268
AV ++ +D +RNF ETV+L + L++ D +R V L + Q+ V D +
Sbjct: 9 AVARALEDAPQRNFRETVDLAVNLRDLDLNDPSQRVDEGVVLPSGTGQETQIVVFADGET 68
Query: 269 CDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGPGLNKAGK 448
A + + +++ I LG L GK
Sbjct: 69 AVRADDVADDVLDEDDLSDLADDTDAAKDLADETDFFVAEAPMMQDIAGALGQVLGPRGK 128
Query: 449 FPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNV 598
P L + + ++ +K T++ + + VG DM+ +++A N+
Sbjct: 129 MPTPLQPDDDVVDTVNRMKNTVQIRSRDRRTFHTRVGAEDMSAEDIASNI 178
>UniRef50_Q5CLP4 Cluster: At2g42650/F14N22.8; n=2;
Cryptosporidium|Rep: At2g42650/F14N22.8 -
Cryptosporidium hominis
Length = 250
Score = 39.9 bits (89), Expect = 0.047
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 389 ESLIKQIPRLLGPGLNKAGKFPGLLSHQES-MTQKIDEVKGTIKFQMKKVLCLSVAVGHV 565
+ +I+++P+LLG KA K P + +ES ++ + +KK C+ + V V
Sbjct: 137 DRIIEKMPKLLGSYFIKANKMPIAIKIRESNFKNSLESALSSTFMSIKKGKCIGIRVARV 196
Query: 566 DMTPDELAQNV 598
DM ++ QN+
Sbjct: 197 DMNTKQVVQNL 207
>UniRef50_O27716 Cluster: 50S ribosomal protein L1P; n=3;
Methanobacteriaceae|Rep: 50S ribosomal protein L1P -
Methanobacterium thermoautotrophicum
Length = 224
Score = 39.9 bits (89), Expect = 0.047
Identities = 33/175 (18%), Positives = 76/175 (43%), Gaps = 3/175 (1%)
Frame = +2
Query: 83 ECVNAVLQSSK-DKKRNFLETVELQIGLKNYDPQK-DKRFSGTVKLKYIPRPKMQVCVLG 256
E + AV ++ + + RNF +++++ + +K+ D K + RF V L +++ V+
Sbjct: 16 EIMEAVKKAKELSRPRNFTQSMDVILNIKDLDVNKPENRFDEEVSLPNGRGKDVKIAVIA 75
Query: 257 DQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSES-LIKQIPRLLGPGL 433
D + +AK + +++ ++ + R +GP L
Sbjct: 76 DGELALQAKNAGADLVITKDELEELGKNRKEAKKLANQYEFFVAQADMMPLVGRFMGPVL 135
Query: 434 NKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNV 598
K P + + +++++ T+K ++K + VG DM ++LA+N+
Sbjct: 136 GPRKKMPKPVPATINPEPILNKLRDTVKVRIKDQPVVHTVVGTEDMDDEKLAENI 190
>UniRef50_Q9ZE23 Cluster: 50S ribosomal protein L1; n=7;
Bacteria|Rep: 50S ribosomal protein L1 - Rickettsia
prowazekii
Length = 238
Score = 35.9 bits (79), Expect = 0.77
Identities = 43/198 (21%), Positives = 77/198 (38%), Gaps = 2/198 (1%)
Frame = +2
Query: 23 VIGGSLTNKMSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQ-KDKRFS 199
+ G + KV DTLY NAV Q F T+E+ + L DP+ D+
Sbjct: 10 ISGSKKIREAREKVKSDTLYNLTNAVAQLKSASYVKFDPTLEIVMKL-GIDPRHSDQIVR 68
Query: 200 GTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXX 379
G V L ++V V+ ++ +EAK+ +
Sbjct: 69 GVVNLPAGTGKTIRVAVICKEEREEEAKSAGADLVGSINIIDEIKAGQINFDVCIATPDM 128
Query: 380 XXSESLIKQIPRLLGP-GLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAV 556
S+I + R+LGP GL K G ++ K + G ++++ +K + +
Sbjct: 129 M---SMISSVARILGPKGLMPNPKL-GTVTLDIKNAIK-NAKSGQVEYRAEKAGIIHAGL 183
Query: 557 GHVDMTPDELAQNVHLSI 610
G + + +L +N++ I
Sbjct: 184 GKLSFSDQDLLKNLNAFI 201
>UniRef50_Q0AYI8 Cluster: Translation initiation factor IF-2; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
Translation initiation factor IF-2 - Syntrophomonas
wolfei subsp. wolfei (strain Goettingen)
Length = 882
Score = 35.1 bits (77), Expect = 1.3
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +2
Query: 17 SVVIGGSLTNKMSSKVSRD--TLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDK 190
S VI G + S +V RD +YE + L+ KD + +E E IG+K+++ K+
Sbjct: 808 SYVIDGKIQRNASVRVLRDGVIVYEGQLSSLKRFKDDAKEVVENYECGIGIKDFNDVKEG 867
Query: 191 RFSGTVKLKYIPR 229
L+ IPR
Sbjct: 868 DIIEAYTLEEIPR 880
>UniRef50_A2Y3N8 Cluster: DNA primase; n=4; Oryza sativa|Rep: DNA
primase - Oryza sativa subsp. indica (Rice)
Length = 397
Score = 35.1 bits (77), Expect = 1.3
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = +2
Query: 32 GSLTNKMSSKVSRDTLYECVNAVLQSSKDKK-RNFLETVELQIGLKNYDPQKDKRFSGTV 208
G+ + +S + T +E + + LQS K K R +E + D + K + +
Sbjct: 242 GNRRSSISKEDVNATRWEQLKSTLQSGKHKGLRRCIEEIVFSYTYPRLDMEVSKHMNHLL 301
Query: 209 KLKYIPRPKM-QVCVLGDQQHCDEAKTLNVPCM 304
K + PK +VCV D +CD+ VP +
Sbjct: 302 KAPFCIHPKTGRVCVPIDPNNCDDFDPTTVPTL 334
>UniRef50_Q92J89 Cluster: 50S ribosomal protein L1; n=8;
Alphaproteobacteria|Rep: 50S ribosomal protein L1 -
Rickettsia conorii
Length = 239
Score = 35.1 bits (77), Expect = 1.3
Identities = 24/88 (27%), Positives = 38/88 (43%)
Frame = +2
Query: 23 VIGGSLTNKMSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSG 202
+ GG + KV DTLY NAV + F T+E+ + L D+ G
Sbjct: 11 ISGGKKIREAREKVKSDTLYNLTNAVERLKSASYVKFDPTLEIVMKLGIDSRHSDQMVRG 70
Query: 203 TVKLKYIPRPKMQVCVLGDQQHCDEAKT 286
V L ++V V+ ++ +EAK+
Sbjct: 71 VVNLPAGTGKTVRVAVICKEEREEEAKS 98
>UniRef50_Q00XM9 Cluster: LSU ribosomal protein L1P; n=1;
Ostreococcus tauri|Rep: LSU ribosomal protein L1P -
Ostreococcus tauri
Length = 304
Score = 34.7 bits (76), Expect = 1.8
Identities = 33/162 (20%), Positives = 68/162 (41%), Gaps = 2/162 (1%)
Frame = +2
Query: 119 KKRNFLETVELQIGLKNYDPQK-DKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNV 295
K F+E+VEL + L DP++ D G V+L ++V + + + A+
Sbjct: 93 KSERFVESVELAVHL-GVDPKRSDMIVRGAVRLPNGTGKTVRVAAFAEGESAEAARAAGA 151
Query: 296 PCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGP-GLNKAGKFPGLLSHQ 472
+ S +K++ R+LGP GL K G ++ +
Sbjct: 152 SVVGGAELVDAIKEGGSGAIDFDKAVATPGMMSKLKEVARVLGPRGLMPNPKV-GTVTTE 210
Query: 473 ESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNV 598
+ + +++ G ++F+ +K + VG V+ ++L +N+
Sbjct: 211 IAEAVR-EQLGGRVEFRAEKNAIVHTMVGKVNFEDEQLVENI 251
>UniRef50_UPI0000ECD0EF Cluster: CDNA FLJ31980 fis, clone
NT2RP7008487, weakly similar to TRICHOHYALIN.; n=3;
Amniota|Rep: CDNA FLJ31980 fis, clone NT2RP7008487,
weakly similar to TRICHOHYALIN. - Gallus gallus
Length = 955
Score = 33.5 bits (73), Expect = 4.1
Identities = 23/99 (23%), Positives = 47/99 (47%)
Frame = +2
Query: 8 QLPSVVIGGSLTNKMSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKD 187
QL +V SL K++ ++ + +Q KDK+ L+ +ELQ+ + + Q++
Sbjct: 322 QLAILVERDSLNQKLNERIFEKKQQQETLIYMQGEKDKELRNLKKMELQMKMIHESLQQE 381
Query: 188 KRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCM 304
K T+KL+ PK+ +L ++ + + C+
Sbjct: 382 KSQHKTLKLEAEAIPKINGVLLERRRELQKEIEMKKRCL 420
>UniRef50_Q9FJ26 Cluster: DNA primase; n=1; Arabidopsis
thaliana|Rep: DNA primase - Arabidopsis thaliana
(Mouse-ear cress)
Length = 407
Score = 33.5 bits (73), Expect = 4.1
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Frame = +2
Query: 35 SLTNKMSSKVSRDTLYECVNAVLQSSKDKK---RNFLETVELQIGLKNYDPQKDKRFSGT 205
S + +S + + +E + LQS ++K R +E + D + K+ +
Sbjct: 275 SARSSLSEEATSLLRWEQLKKALQSKRNKALSLRTCVEEIVFTFTYPRIDLEVSKQMNHL 334
Query: 206 VKLKYIPRPKM-QVCVLGDQQHCDEAKTLNVPCM 304
+K + PK +VCV D +CDE L VP +
Sbjct: 335 LKAPFCVHPKTGRVCVPIDPNNCDEFDPLAVPTL 368
>UniRef50_A4R562 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 1430
Score = 33.5 bits (73), Expect = 4.1
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 488 SASWTPGGREDQGIYQLCSNRDPTNGESA*SVTLM 384
+A+W PGG DQ + + + DP N +A T++
Sbjct: 422 TATWQPGGAHDQQVLDILKDIDPVNARAAMDTTML 456
>UniRef50_Q5QZU9 Cluster: Methyl-accepting chemotaxis protein; n=1;
Idiomarina loihiensis|Rep: Methyl-accepting chemotaxis
protein - Idiomarina loihiensis
Length = 663
Score = 33.1 bits (72), Expect = 5.4
Identities = 13/45 (28%), Positives = 29/45 (64%)
Frame = -1
Query: 205 SAGETLVLLWVIVLQTNLKLYSLQKVTFLVLRGLKNGIHALVERV 71
+A ETL LW++V+ + + ++ +TF +L+G+ + + L+E +
Sbjct: 301 TASETLSQLWLLVILISAFILAIVVLTFFILKGIYSQVRELLEGI 345
>UniRef50_Q3KPN0 Cluster: LOC733385 protein; n=2; Xenopus
laevis|Rep: LOC733385 protein - Xenopus laevis (African
clawed frog)
Length = 446
Score = 32.3 bits (70), Expect = 9.4
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +2
Query: 407 IPRLLGPGLNKAGKFPGLLSHQESMTQKIDE--VKGTIKFQMKKVLCLSVAVGHVDMTPD 580
+P LLG KA + P ++ + + ++GT K C S+ VGH DM D
Sbjct: 152 LPSLLGKHFYKAKREPQSVNLKSKYLAALLNRFIQGTQLHINNKGCCYSIRVGHTDMKVD 211
Query: 581 ELAQN 595
++ +N
Sbjct: 212 DIVEN 216
>UniRef50_A3XWB4 Cluster: Putative uncharacterized protein; n=3;
Vibrionales|Rep: Putative uncharacterized protein -
Vibrio sp. MED222
Length = 1130
Score = 32.3 bits (70), Expect = 9.4
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +2
Query: 389 ESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIK 517
+SL PR GL LL + E +TQK DE+K TIK
Sbjct: 179 QSLTAWRPRQAANGLLLTTDVASLLENNEQITQKADELKSTIK 221
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 627,599,737
Number of Sequences: 1657284
Number of extensions: 12406943
Number of successful extensions: 32112
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 31246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32098
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44392209541
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -