Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20l17
(616 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12404-1|AAA86463.1| 217|Homo sapiens Csa-19 protein. 257 3e-68
BT020041-1|AAV38844.1| 217|Homo sapiens ribosomal protein L10a ... 257 3e-68
BT020040-1|AAV38843.1| 217|Homo sapiens ribosomal protein L10a ... 257 3e-68
BC070216-1|AAH70216.1| 217|Homo sapiens ribosomal protein L10a ... 257 3e-68
BC011366-1|AAH11366.1| 217|Homo sapiens ribosomal protein L10a ... 257 3e-68
BC006791-1|AAH06791.1| 217|Homo sapiens ribosomal protein L10a ... 257 3e-68
AL022721-5|CAB38627.1| 217|Homo sapiens ribosomal protein L10a ... 257 3e-68
AB082926-1|BAC16802.1| 217|Homo sapiens ribosomal protein L10a ... 257 3e-68
BC116456-1|AAI16457.1| 206|Homo sapiens RPL10A protein protein. 233 5e-61
>U12404-1|AAA86463.1| 217|Homo sapiens Csa-19 protein.
Length = 217
Score = 257 bits (629), Expect = 3e-68
Identities = 124/189 (65%), Positives = 139/189 (73%)
Frame = +2
Query: 50 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPR 229
MSSKVSRDTLYE V VL ++ K+R FLETVELQI LKNYDPQKDKRFSGTV+LK PR
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPR 60
Query: 230 PKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQI 409
PK VCVLGDQQHCDEAK +++P M SESLIKQI
Sbjct: 61 PKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLVKKYDAFLASESLIKQI 120
Query: 410 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELA 589
PR+LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKKVLCL+VAVGHV MT DEL
Sbjct: 121 PRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELV 180
Query: 590 QNVHLSINF 616
N+HL++NF
Sbjct: 181 YNIHLAVNF 189
>BT020041-1|AAV38844.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 257 bits (629), Expect = 3e-68
Identities = 124/189 (65%), Positives = 139/189 (73%)
Frame = +2
Query: 50 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPR 229
MSSKVSRDTLYE V VL ++ K+R FLETVELQI LKNYDPQKDKRFSGTV+LK PR
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPR 60
Query: 230 PKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQI 409
PK VCVLGDQQHCDEAK +++P M SESLIKQI
Sbjct: 61 PKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQI 120
Query: 410 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELA 589
PR+LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKKVLCL+VAVGHV MT DEL
Sbjct: 121 PRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELV 180
Query: 590 QNVHLSINF 616
N+HL++NF
Sbjct: 181 YNIHLAVNF 189
>BT020040-1|AAV38843.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 257 bits (629), Expect = 3e-68
Identities = 124/189 (65%), Positives = 139/189 (73%)
Frame = +2
Query: 50 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPR 229
MSSKVSRDTLYE V VL ++ K+R FLETVELQI LKNYDPQKDKRFSGTV+LK PR
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPR 60
Query: 230 PKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQI 409
PK VCVLGDQQHCDEAK +++P M SESLIKQI
Sbjct: 61 PKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQI 120
Query: 410 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELA 589
PR+LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKKVLCL+VAVGHV MT DEL
Sbjct: 121 PRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELV 180
Query: 590 QNVHLSINF 616
N+HL++NF
Sbjct: 181 YNIHLAVNF 189
>BC070216-1|AAH70216.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 257 bits (629), Expect = 3e-68
Identities = 124/189 (65%), Positives = 139/189 (73%)
Frame = +2
Query: 50 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPR 229
MSSKVSRDTLYE V VL ++ K+R FLETVELQI LKNYDPQKDKRFSGTV+LK PR
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPR 60
Query: 230 PKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQI 409
PK VCVLGDQQHCDEAK +++P M SESLIKQI
Sbjct: 61 PKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQI 120
Query: 410 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELA 589
PR+LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKKVLCL+VAVGHV MT DEL
Sbjct: 121 PRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELV 180
Query: 590 QNVHLSINF 616
N+HL++NF
Sbjct: 181 YNIHLAVNF 189
>BC011366-1|AAH11366.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 257 bits (629), Expect = 3e-68
Identities = 124/189 (65%), Positives = 139/189 (73%)
Frame = +2
Query: 50 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPR 229
MSSKVSRDTLYE V VL ++ K+R FLETVELQI LKNYDPQKDKRFSGTV+LK PR
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPR 60
Query: 230 PKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQI 409
PK VCVLGDQQHCDEAK +++P M SESLIKQI
Sbjct: 61 PKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQI 120
Query: 410 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELA 589
PR+LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKKVLCL+VAVGHV MT DEL
Sbjct: 121 PRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELV 180
Query: 590 QNVHLSINF 616
N+HL++NF
Sbjct: 181 YNIHLAVNF 189
>BC006791-1|AAH06791.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 257 bits (629), Expect = 3e-68
Identities = 124/189 (65%), Positives = 139/189 (73%)
Frame = +2
Query: 50 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPR 229
MSSKVSRDTLYE V VL ++ K+R FLETVELQI LKNYDPQKDKRFSGTV+LK PR
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPR 60
Query: 230 PKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQI 409
PK VCVLGDQQHCDEAK +++P M SESLIKQI
Sbjct: 61 PKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQI 120
Query: 410 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELA 589
PR+LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKKVLCL+VAVGHV MT DEL
Sbjct: 121 PRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELV 180
Query: 590 QNVHLSINF 616
N+HL++NF
Sbjct: 181 YNIHLAVNF 189
>AL022721-5|CAB38627.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 257 bits (629), Expect = 3e-68
Identities = 124/189 (65%), Positives = 139/189 (73%)
Frame = +2
Query: 50 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPR 229
MSSKVSRDTLYE V VL ++ K+R FLETVELQI LKNYDPQKDKRFSGTV+LK PR
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPR 60
Query: 230 PKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQI 409
PK VCVLGDQQHCDEAK +++P M SESLIKQI
Sbjct: 61 PKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQI 120
Query: 410 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELA 589
PR+LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKKVLCL+VAVGHV MT DEL
Sbjct: 121 PRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELV 180
Query: 590 QNVHLSINF 616
N+HL++NF
Sbjct: 181 YNIHLAVNF 189
>AB082926-1|BAC16802.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 257 bits (629), Expect = 3e-68
Identities = 124/189 (65%), Positives = 139/189 (73%)
Frame = +2
Query: 50 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPR 229
MSSKVSRDTLYE V VL ++ K+R FLETVELQI LKNYDPQKDKRFSGTV+LK PR
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPR 60
Query: 230 PKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQI 409
PK VCVLGDQQHCDEAK +++P M SESLIKQI
Sbjct: 61 PKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQI 120
Query: 410 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELA 589
PR+LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKKVLCL+VAVGHV MT DEL
Sbjct: 121 PRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELV 180
Query: 590 QNVHLSINF 616
N+HL++NF
Sbjct: 181 YNIHLAVNF 189
>BC116456-1|AAI16457.1| 206|Homo sapiens RPL10A protein protein.
Length = 206
Score = 233 bits (569), Expect = 5e-61
Identities = 111/174 (63%), Positives = 127/174 (72%)
Frame = +2
Query: 95 AVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQHCD 274
+VL ++ K+R FLETVELQI LKNYDPQKDKRFSGTV+LK PRPK VCVLGDQQHCD
Sbjct: 5 SVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCD 64
Query: 275 EAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGPGLNKAGKFP 454
EAK +++P M SESLIKQIPR+LGPGLNKAGKFP
Sbjct: 65 EAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFP 124
Query: 455 GLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINF 616
LL+H E+M K+DEVK TIKFQMKKVLCL+VAVGHV MT DEL N+HL++NF
Sbjct: 125 SLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNF 178
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,294,577
Number of Sequences: 237096
Number of extensions: 2095713
Number of successful extensions: 10537
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10528
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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