Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20l17
         (616 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT014654-1|AAT27278.1|  217|Drosophila melanogaster RE06042p pro...   272   3e-73
AE014296-2043|AAF50002.2|  217|Drosophila melanogaster CG7283-PA...   272   3e-73
AY113239-1|AAM29244.1|  216|Drosophila melanogaster AT11516p pro...   176   2e-44
AE014297-1926|AAF55120.1|  216|Drosophila melanogaster CG3843-PA...   176   2e-44
BT001825-1|AAN71580.1|  155|Drosophila melanogaster RH43519p pro...   165   4e-41
BT001758-1|AAN71513.1|  150|Drosophila melanogaster RH06366p pro...   138   5e-33
AE014296-2045|AAN12245.1|  140|Drosophila melanogaster CG7283-PC...   138   5e-33
AE014296-2044|AAN12244.1|   57|Drosophila melanogaster CG7283-PB...    95   7e-20
AY051627-1|AAK93051.1|  517|Drosophila melanogaster GH27756p pro...    30   2.9  
AE014298-2517|AAF48693.1|  517|Drosophila melanogaster CG4955-PA...    30   2.9  

>BT014654-1|AAT27278.1|  217|Drosophila melanogaster RE06042p
           protein.
          Length = 217

 Score =  272 bits (666), Expect = 3e-73
 Identities = 137/189 (72%), Positives = 146/189 (77%)
 Frame = +2

Query: 50  MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPR 229
           M+SKVSRDTLYE VN +L++S  KKR FLETVELQIGLKNYDPQKDKRFSGTVKLK+IPR
Sbjct: 1   MASKVSRDTLYEGVNGLLEASAKKKRGFLETVELQIGLKNYDPQKDKRFSGTVKLKHIPR 60

Query: 230 PKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQI 409
           PKM+VC+LGDQQHCDEAK  NV  M                           SESLIKQI
Sbjct: 61  PKMKVCILGDQQHCDEAKANNVDFMDAEALKKLNKNKKLVKKLAKSYDAFLASESLIKQI 120

Query: 410 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELA 589
           PRLLGPGLNKAGKFP LLSHQESM  KI+EVK TIKFQMKKVLCLSVAVGHV M  DELA
Sbjct: 121 PRLLGPGLNKAGKFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHVGMKSDELA 180

Query: 590 QNVHLSINF 616
           QNV+LSINF
Sbjct: 181 QNVNLSINF 189


>AE014296-2043|AAF50002.2|  217|Drosophila melanogaster CG7283-PA,
           isoform A protein.
          Length = 217

 Score =  272 bits (666), Expect = 3e-73
 Identities = 137/189 (72%), Positives = 146/189 (77%)
 Frame = +2

Query: 50  MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPR 229
           M+SKVSRDTLYE VN +L++S  KKR FLETVELQIGLKNYDPQKDKRFSGTVKLK+IPR
Sbjct: 1   MASKVSRDTLYEGVNGLLEASAKKKRGFLETVELQIGLKNYDPQKDKRFSGTVKLKHIPR 60

Query: 230 PKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQI 409
           PKM+VC+LGDQQHCDEAK  NV  M                           SESLIKQI
Sbjct: 61  PKMKVCILGDQQHCDEAKANNVDFMDAEALKKLNKNKKLVKKLAKSYDAFLASESLIKQI 120

Query: 410 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELA 589
           PRLLGPGLNKAGKFP LLSHQESM  KI+EVK TIKFQMKKVLCLSVAVGHV M  DELA
Sbjct: 121 PRLLGPGLNKAGKFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHVGMKSDELA 180

Query: 590 QNVHLSINF 616
           QNV+LSINF
Sbjct: 181 QNVNLSINF 189


>AY113239-1|AAM29244.1|  216|Drosophila melanogaster AT11516p
           protein.
          Length = 216

 Score =  176 bits (428), Expect = 2e-44
 Identities = 93/189 (49%), Positives = 121/189 (64%)
 Frame = +2

Query: 50  MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPR 229
           M SKVSRDT+Y  V  +L +S+ K  + LETVELQIGL++YDP K KRF G+V L ++  
Sbjct: 1   MVSKVSRDTIYVAVKNILLNSQAKGPDCLETVELQIGLRDYDPDKCKRFHGSVLLHHLAV 60

Query: 230 PKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQI 409
           P+++VCV GDQ+HC +AK + V C+                           SES+IKQI
Sbjct: 61  PQLKVCVFGDQEHCYKAKAIGVDCLDVEALKKLNKDPKLTKKLSKAYDVFLASESIIKQI 120

Query: 410 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELA 589
           PRLLGPGL  AGKF   L+  ESM+ KI ++  T K  MK++ CLSV VGHV M P+ELA
Sbjct: 121 PRLLGPGLTNAGKFLTPLARGESMSSKI-KILSTKKKHMKRMECLSVNVGHVGMHPEELA 179

Query: 590 QNVHLSINF 616
           +N+ +SINF
Sbjct: 180 RNIAISINF 188


>AE014297-1926|AAF55120.1|  216|Drosophila melanogaster CG3843-PA
           protein.
          Length = 216

 Score =  176 bits (428), Expect = 2e-44
 Identities = 93/189 (49%), Positives = 121/189 (64%)
 Frame = +2

Query: 50  MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPR 229
           M SKVSRDT+Y  V  +L +S+ K  + LETVELQIGL++YDP K KRF G+V L ++  
Sbjct: 1   MVSKVSRDTIYVAVKNILLNSQAKGPDCLETVELQIGLRDYDPDKCKRFHGSVLLHHLAV 60

Query: 230 PKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQI 409
           P+++VCV GDQ+HC +AK + V C+                           SES+IKQI
Sbjct: 61  PQLKVCVFGDQEHCYKAKAIGVDCLDVEALKKLNKDPKLTKKLSKAYDVFLASESIIKQI 120

Query: 410 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELA 589
           PRLLGPGL  AGKF   L+  ESM+ KI ++  T K  MK++ CLSV VGHV M P+ELA
Sbjct: 121 PRLLGPGLTNAGKFLTPLARGESMSSKI-KILSTKKKHMKRMECLSVNVGHVGMHPEELA 179

Query: 590 QNVHLSINF 616
           +N+ +SINF
Sbjct: 180 RNIAISINF 188


>BT001825-1|AAN71580.1|  155|Drosophila melanogaster RH43519p
           protein.
          Length = 155

 Score =  165 bits (401), Expect = 4e-41
 Identities = 85/127 (66%), Positives = 89/127 (70%)
 Frame = +2

Query: 236 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPR 415
           M+VC+LGDQQHCDEAK  NV  M                           SESLIKQIPR
Sbjct: 1   MKVCILGDQQHCDEAKANNVDFMDAEALKKLNKNKKLVKKLAKSYDAFLASESLIKQIPR 60

Query: 416 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQN 595
           LLGPGLNKAGKFP LLSHQESM  KI+EVK TIKFQMKKVLCLSVAVGHV M  DELAQN
Sbjct: 61  LLGPGLNKAGKFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHVGMKSDELAQN 120

Query: 596 VHLSINF 616
           V+LSINF
Sbjct: 121 VNLSINF 127


>BT001758-1|AAN71513.1|  150|Drosophila melanogaster RH06366p
           protein.
          Length = 150

 Score =  138 bits (334), Expect = 5e-33
 Identities = 68/77 (88%), Positives = 70/77 (90%)
 Frame = +2

Query: 386 SESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHV 565
           SESLIKQIPRLLGPGLNKAGKFP LLSHQESM  KI+EVK TIKFQMKKVLCLSVAVGHV
Sbjct: 46  SESLIKQIPRLLGPGLNKAGKFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHV 105

Query: 566 DMTPDELAQNVHLSINF 616
            M  DELAQNV+LSINF
Sbjct: 106 GMKSDELAQNVNLSINF 122



 Score = 39.5 bits (88), Expect = 0.004
 Identities = 21/42 (50%), Positives = 30/42 (71%)
 Frame = +2

Query: 50  MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYD 175
           M+SKVSRDTLYE VN +L++S  KK N  + +  ++  K+YD
Sbjct: 1   MASKVSRDTLYEGVNGLLEASAKKKLNKNKKLVKKLA-KSYD 41


>AE014296-2045|AAN12245.1|  140|Drosophila melanogaster CG7283-PC,
           isoform C protein.
          Length = 140

 Score =  138 bits (334), Expect = 5e-33
 Identities = 68/77 (88%), Positives = 70/77 (90%)
 Frame = +2

Query: 386 SESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHV 565
           SESLIKQIPRLLGPGLNKAGKFP LLSHQESM  KI+EVK TIKFQMKKVLCLSVAVGHV
Sbjct: 36  SESLIKQIPRLLGPGLNKAGKFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHV 95

Query: 566 DMTPDELAQNVHLSINF 616
            M  DELAQNV+LSINF
Sbjct: 96  GMKSDELAQNVNLSINF 112


>AE014296-2044|AAN12244.1|   57|Drosophila melanogaster CG7283-PB,
           isoform B protein.
          Length = 57

 Score = 95.1 bits (226), Expect = 7e-20
 Identities = 45/54 (83%), Positives = 49/54 (90%)
 Frame = +2

Query: 50  MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVK 211
           M+SKVSRDTLYE VN +L++S  KKR FLETVELQIGLKNYDPQKDKRFSGTVK
Sbjct: 1   MASKVSRDTLYEGVNGLLEASAKKKRGFLETVELQIGLKNYDPQKDKRFSGTVK 54


>AY051627-1|AAK93051.1|  517|Drosophila melanogaster GH27756p
           protein.
          Length = 517

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = -1

Query: 379 ESIKFFGQFLDKLFVLIQFFQSLSIHTWHIQGFSLVTMLLVSKNAN 242
           E + FF  FL ++  ++ FF   +I  W   G+ +V +L+  KNA+
Sbjct: 339 EQLNFFITFLLEVLGVLVFFAICTITFWITLGYHVVQLLVDLKNAD 384


>AE014298-2517|AAF48693.1|  517|Drosophila melanogaster CG4955-PA
           protein.
          Length = 517

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = -1

Query: 379 ESIKFFGQFLDKLFVLIQFFQSLSIHTWHIQGFSLVTMLLVSKNAN 242
           E + FF  FL ++  ++ FF   +I  W   G+ +V +L+  KNA+
Sbjct: 339 EQLNFFITFLLEVLGVLVFFAICTITFWITLGYHVVQLLVDLKNAD 384


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,780,632
Number of Sequences: 53049
Number of extensions: 593220
Number of successful extensions: 1476
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1469
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)