Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20l14
         (657 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   1.3  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   3.9  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   3.9  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   3.9  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   6.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.9  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 359 ILKYYKSLNADTFEHYHIVVTTY 427
           +L ++K  +   F +Y IVVTT+
Sbjct: 66  VLMFFKEASLYCFNYYVIVVTTF 88



 Score = 23.0 bits (47), Expect = 2.2
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 434 KRRTWSPQCGNAQTCRHSKICNTLKC*NLNYAF 336
           KRRTW+    N ++C  +KI  T +     YAF
Sbjct: 90  KRRTWTRLLKNLESC--AKIKKTKRYCYYYYAF 120


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 500 RVVLDEAHIIKNCKTGVHNAACALTATNRWC 592
           +++LD   +I N    VH     +T  N+WC
Sbjct: 61  QIILDVILLILN----VHTILTTITKRNQWC 87


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 500 RVVLDEAHIIKNCKTGVHNAACALTATNRWC 592
           +++LD   +I N    VH     +T  N+WC
Sbjct: 61  QIILDVILLILN----VHTILTTITKRNQWC 87


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 500 RVVLDEAHIIKNCKTGVHNAACALTATNRWC 592
           +++LD   +I N    VH     +T  N+WC
Sbjct: 381 QIILDVILLILN----VHTILTTITKRNQWC 407


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -3

Query: 655 LQKINHRVHIPVFVVDRCAGDAP 587
           +QK++H ++    ++DR  G AP
Sbjct: 139 VQKVSHTLYHLQDIIDRNGGRAP 161


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 5/22 (22%), Positives = 13/22 (59%)
 Frame = +2

Query: 98   DDPNFEHQTPNLLAHQKKGIQW 163
            ++ N++H+  +L   Q+  + W
Sbjct: 1530 EEDNYDHRRNSLQMQQRNNVTW 1551


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 5/22 (22%), Positives = 13/22 (59%)
 Frame = +2

Query: 98   DDPNFEHQTPNLLAHQKKGIQW 163
            ++ N++H+  +L   Q+  + W
Sbjct: 1530 EEDNYDHRRNSLQMQQRNNVTW 1551


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 5/22 (22%), Positives = 13/22 (59%)
 Frame = +2

Query: 98   DDPNFEHQTPNLLAHQKKGIQW 163
            ++ N++H+  +L   Q+  + W
Sbjct: 1530 EEDNYDHRRNSLQMQQRNNVTW 1551


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 5/22 (22%), Positives = 13/22 (59%)
 Frame = +2

Query: 98   DDPNFEHQTPNLLAHQKKGIQW 163
            ++ N++H+  +L   Q+  + W
Sbjct: 1530 EEDNYDHRRNSLQMQQRNNVTW 1551


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,716
Number of Sequences: 336
Number of extensions: 3576
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)