Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20l14
(657 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1459 + 26681619-26682419,26682600-26682912,26683861-26684672 101 4e-22
02_04_0056 + 19313422-19313967,19314035-19314168,19314263-193143... 101 7e-22
04_01_0399 - 5214183-5214206,5215437-5215502,5219537-5219635,521... 99 4e-21
04_04_1704 - 35481041-35481461,35481682-35481810,35482291-354823... 98 6e-21
02_01_0459 + 3298780-3298788,3298900-3299037,3299174-3299207,329... 93 2e-19
02_05_0366 - 28313190-28313601,28313759-28314225,28315044-283157... 87 9e-18
09_04_0287 - 16407324-16407551,16407647-16407748,16407824-164079... 86 2e-17
03_05_0952 + 29103879-29103983,29104103-29104600,29104693-291047... 85 4e-17
07_03_1567 - 27772815-27773302,27773471-27773561,27773641-277739... 85 5e-17
01_06_0006 - 25517892-25517935,25518156-25518276,25518598-255187... 85 6e-17
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 84 1e-16
05_03_0142 - 8866316-8866608,8867652-8867886,8868801-8869076,886... 83 2e-16
05_01_0360 + 2814139-2814627,2815203-2815334,2815480-2815583,281... 82 3e-16
01_04_0010 - 15058175-15058195,15058320-15058430,15059031-150592... 80 1e-15
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753... 78 5e-15
01_06_1556 - 38222071-38222708,38222795-38222822,38222950-382230... 74 1e-13
02_05_0844 - 32144417-32144764,32145588-32145686,32146218-321464... 72 5e-13
01_07_0197 + 41912207-41912652,41913226-41913800,41913828-419157... 68 8e-12
04_04_0822 + 28352941-28353825,28353863-28354016,28354714-283547... 67 1e-11
08_01_0540 + 4691929-4692014,4692915-4693125,4693756-4693885,469... 66 2e-11
04_04_1247 - 32043776-32043880,32044296-32044505,32044595-320451... 66 2e-11
01_06_0919 - 32993752-32993856,32994383-32994592,32994666-329952... 63 2e-10
07_03_0561 + 19485218-19485242,19485323-19486467,19487354-194874... 62 5e-10
05_01_0318 - 2488529-2489196,2489773-2490372,2490620-2490773,249... 60 2e-09
06_01_0584 - 4178391-4178732,4178854-4178915,4180361-4180481,418... 44 2e-09
07_03_1696 - 28779455-28779733,28779813-28780074,28780805-287809... 59 4e-09
01_01_0020 + 147147-147313,148450-148548,148634-148742,148856-14... 57 1e-08
03_02_1012 + 13207907-13207990,13209196-13209280,13209402-132101... 55 6e-08
02_01_0102 - 749122-749799,750123-750371,750753-750851,751380-75... 53 2e-07
03_01_0013 - 105281-105552,105762-105838,105839-106524,106655-10... 48 7e-06
10_08_0962 + 21880919-21880983,21881100-21881487,21881807-218819... 42 6e-04
07_03_0149 - 14452654-14452666,14452943-14454699,14454886-144549... 39 0.003
06_01_1034 + 8110347-8110943,8111201-8111512,8111841-8112011,811... 39 0.004
07_03_1410 + 26363538-26363777,26365421-26365475,26365553-263656... 38 0.005
10_08_0259 + 16274430-16274747,16275180-16275242,16275329-162754... 33 0.15
08_01_0892 - 8778097-8778236,8778390-8778486,8778568-8778747,877... 33 0.15
03_01_0455 + 3487354-3488090,3489172-3489255,3489942-3490554,349... 32 0.46
07_03_1147 + 24349811-24350161,24351031-24351366,24353260-243533... 31 0.61
05_04_0194 + 18949268-18951514,18952063-18952215,18952304-18954241 29 2.5
10_01_0048 - 659107-660402,661650-661867,662299-662335 28 5.7
01_05_0575 + 23372759-23373676,23373798-23373941,23374065-23374427 28 7.5
09_06_0026 + 20312364-20312687,20312780-20312950 27 9.9
05_05_0252 - 23621592-23621912,23621958-23622317,23622979-236230... 27 9.9
01_06_1436 - 37353741-37354525,37356508-37356619 27 9.9
>07_03_1459 + 26681619-26682419,26682600-26682912,26683861-26684672
Length = 641
Score = 101 bits (243), Expect = 4e-22
Identities = 69/193 (35%), Positives = 98/193 (50%), Gaps = 29/193 (15%)
Frame = +2
Query: 164 MINREKNGRP---NGGVLADDMGLGKTLSVLMLI---------------AKNNSVQ---- 277
+ N++ N RP GG+ ADDMGLGKTL++L LI AK V+
Sbjct: 48 LTNQKTNERPPPLKGGIFADDMGLGKTLTLLSLIGRSKARNVGGKKARGAKRRKVEEAVE 107
Query: 278 ---LKTLIVCPLSLINHWVTENKKHNL--NFNILKYYKSLNADTFE--HYHIVVTTYDVL 436
TL+VCP S+ + WVT+ ++H + + Y+ + E Y IV+TTY L
Sbjct: 108 EESRTTLVVCPPSVFSSWVTQLEEHTKTGSLKVYLYHGERTKEKKELLKYDIVITTYSTL 167
Query: 437 LAHFKLIKQNKHSSLFSTCWHRVVLDEAHIIKNCKTGVHNAACALTATNRWCITGTPIHN 616
+ + S + W RV+LDEAH+IKN A AL A RW +TGTPI N
Sbjct: 168 GQEL----EQEGSPVKEIEWFRVILDEAHVIKNSAARQTKAVIALNAERRWVVTGTPIQN 223
Query: 617 KHWDMYSMINFLQ 655
+D+Y ++ FL+
Sbjct: 224 SSFDLYPLMAFLR 236
>02_04_0056 +
19313422-19313967,19314035-19314168,19314263-19314398,
19314870-19314923,19314995-19315135,19315220-19315546,
19315647-19315916,19316080-19316226,19316890-19317045,
19317223-19317290,19318210-19318309,19318696-19318985,
19319074-19319274,19319840-19319902,19320263-19320356,
19320964-19321035,19321979-19322077,19322254-19322376
Length = 1006
Score = 101 bits (241), Expect = 7e-22
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 5/128 (3%)
Frame = +2
Query: 287 LIVCPLSLINHWVTENKKHNL--NFNILKYY---KSLNADTFEHYHIVVTTYDVLLAHFK 451
LIVCP++L+ W E + H + +I +Y + A+ IV+TTY VL + F
Sbjct: 524 LIVCPMTLLGQWKAEIEAHATPGSVSIYVHYGQNRPKEANLIGQSDIVLTTYGVLSSEFS 583
Query: 452 LIKQNKHSSLFSTCWHRVVLDEAHIIKNCKTGVHNAACALTATNRWCITGTPIHNKHWDM 631
+ L+S W RVVLDEAH+IK+ K+ + AA ALTA RWC+TGTPI N D+
Sbjct: 584 NENSTESGGLYSIHWFRVVLDEAHMIKSPKSLISLAAAALTADRRWCLTGTPIQNNLEDI 643
Query: 632 YSMINFLQ 655
YS+ FL+
Sbjct: 644 YSLFRFLR 651
Score = 32.3 bits (70), Expect = 0.35
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 197 GGVLADDMGLGKTLSVLMLIAKNNS 271
GG+LAD MGLGKT+ + L+ ++S
Sbjct: 445 GGILADAMGLGKTIMTIALLLADSS 469
>04_01_0399 - 5214183-5214206,5215437-5215502,5219537-5219635,
5219746-5219817,5219918-5220491,5220575-5220687,
5220842-5220941,5221059-5221181,5221268-5221335,
5221461-5221610,5221715-5221858,5222097-5222288,
5222710-5222794,5222892-5223043,5223138-5223296,
5223552-5223605,5223698-5223836,5223955-5224088,
5224200-5225117
Length = 1121
Score = 98.7 bits (235), Expect = 4e-21
Identities = 66/181 (36%), Positives = 97/181 (53%), Gaps = 29/181 (16%)
Frame = +2
Query: 197 GGVLADDMGLGKTLSVLMLIAKN-----------------------NSVQLKTLIVCPLS 307
GG+LAD MGLGKT+ + LI N +SV+ TLI+CP++
Sbjct: 546 GGILADAMGLGKTVMTIALILSNPRGELEQDKRGTRDRDTKAQTSRSSVRGGTLIICPMA 605
Query: 308 LINHWVTENKKHNLN--FNILKYY---KSLNADTFEHYHIVVTTYDVLLAHFKLIKQNKH 472
L+ W E + H+ ++ YY ++ + + +V+TTY VL + K N
Sbjct: 606 LLGQWKDELEAHSTPGALSVFVYYGGDRTTDLRFMAQHSVVLTTYGVLQSAHK----NDG 661
Query: 473 SSLFSTC-WHRVVLDEAHIIKNCKTGVHNAACALTATNRWCITGTPIHNKHWDMYSMINF 649
SS+F W+RVVLDEAH IK+ +T AA LT+ RWC+TGTP+ N D++S++ F
Sbjct: 662 SSIFHRIDWYRVVLDEAHTIKSPRTKAARAAYELTSHCRWCLTGTPLQNNLEDLFSLLCF 721
Query: 650 L 652
L
Sbjct: 722 L 722
>04_04_1704 -
35481041-35481461,35481682-35481810,35482291-35482397,
35482515-35482583,35482825-35482936,35483013-35483131,
35483211-35483291,35483629-35483700,35484039-35484239,
35484442-35484528,35485284-35485523,35485991-35486455,
35487434-35487556,35487643-35487769,35487851-35487919,
35488061-35488189,35488628-35488722,35488808-35488876,
35489332-35489443,35489545-35489663,35489753-35489833,
35490898-35490969,35491052-35491267,35491524-35491601,
35491694-35491831,35492403-35492414,35492639-35492872,
35493076-35493130,35493222-35493352,35493813-35494546,
35494613-35494820
Length = 1634
Score = 97.9 bits (233), Expect = 6e-21
Identities = 62/174 (35%), Positives = 94/174 (54%), Gaps = 12/174 (6%)
Frame = +2
Query: 131 LLAHQKKGIQWMINREKNGRPNGGVLADDMGLGKTLSVLMLIAK--NNSVQLKTLIVCPL 304
L HQ++G++W+ G GG+L DDMGLGKT+ V +A ++ + + L+V P
Sbjct: 280 LYPHQREGLRWLWVLHCRG--TGGILGDDMGLGKTMQVSAFLAGLFHSRLIKRVLVVAPK 337
Query: 305 SLINHWVTENKKHNLNFNILKYY-KSLNADTFEHYH------IVVTTYDVLLAHFKLIKQ 463
+L+ HW E +L I Y + NA +E + I++TTYD++ +FK+IK
Sbjct: 338 TLLTHWTKELSVVSLKDKIRDYSGPNANARNYELKYAFKEGGILLTTYDIVRNNFKMIKG 397
Query: 464 NKHSSLFS---TCWHRVVLDEAHIIKNCKTGVHNAACALTATNRWCITGTPIHN 616
N + T W+ V+LDE HIIKN KT + + +R I+GTPI N
Sbjct: 398 NFTNDFDDEEETLWNYVILDEGHIIKNPKTQRAQSLFEIPCAHRIVISGTPIQN 451
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Frame = +2
Query: 392 TFEHYHIVVTTYDVLLAHFKLIKQNKHSSLFST-----CWHRVVLDEAHIIKNCKTGVHN 556
T + I++T+Y ++ ++ L++ N + + W V+LDE HI+KN KT
Sbjct: 1087 TIQEGGILLTSYHIVRNNYMLLRGNGNGNNVDNNEEEPLWDYVILDEGHIVKNTKTQRAQ 1146
Query: 557 AACALTATNRWCITGTPIHNK 619
+ + + +R +TGTPI NK
Sbjct: 1147 SLFQIPSAHRIVLTGTPIQNK 1167
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +2
Query: 128 NLLAHQKKGIQWMINREKNGRPNGGVLADDMGLGKTL 238
+L HQ+ G+ W+ GG+LADDMGLGKT+
Sbjct: 1054 SLYPHQRDGLAWLWALHCTA--TGGILADDMGLGKTI 1088
>02_01_0459 + 3298780-3298788,3298900-3299037,3299174-3299207,
3299528-3299531,3299814-3299949,3300034-3300090,
3301689-3301786,3301876-3301947,3302056-3302228,
3302552-3302698,3303113-3303336,3305300-3305306,
3305634-3305800,3306033-3306068,3306787-3307004,
3307115-3307172,3307761-3307842,3308045-3308207,
3308594-3308598,3308700-3308885,3308969-3309548,
3309642-3309774,3309880-3309948,3310184-3310395,
3310654-3310891,3311228-3311386,3311501-3311926,
3312010-3312447,3312593-3312712,3312784-3313266,
3313471-3314009,3314178-3314667,3314836-3314904,
3315735-3315839,3315940-3316158,3316254-3316508,
3316602-3316651,3317175-3317284,3317372-3317454,
3317560-3317772,3317870-3318040
Length = 2391
Score = 92.7 bits (220), Expect = 2e-19
Identities = 62/214 (28%), Positives = 113/214 (52%), Gaps = 20/214 (9%)
Frame = +2
Query: 71 KFFDQAPDN---DDPNFEHQ-TPNLLAHQKKGIQWMINREKNGRPNGGVLADDMGLGKTL 238
+F +Q DN DD + L +Q++GI W+ + G+L DDMGLGKTL
Sbjct: 1778 QFLEQLLDNSQIDDYKLSIDLSVELRRYQQEGINWLAFLRRFKLH--GILCDDMGLGKTL 1835
Query: 239 SVLMLIA--------KNNSVQLKTLIVCPLSLINHWVTENKKHNLNFNILKYYKSLNADT 394
++A +N+ K+LI+CP +L+ HW E +K+ ++ +I+K + + +
Sbjct: 1836 QASAIVAADIAESRARNDEQDPKSLIICPSTLVAHWEYEIEKY-IDSSIMKPLQYIGSSQ 1894
Query: 395 --------FEHYHIVVTTYDVLLAHFKLIKQNKHSSLFSTCWHRVVLDEAHIIKNCKTGV 550
F+ +++++T+YD++ ++ + W+ VLDE HIIKN ++ +
Sbjct: 1895 DRIILRSQFDKFNVIITSYDIIRKDIDFLE--------NVFWNYCVLDEGHIIKNSRSKI 1946
Query: 551 HNAACALTATNRWCITGTPIHNKHWDMYSMINFL 652
+A L A +R ++GTPI N +++S+ +FL
Sbjct: 1947 TSAVKQLKAQHRLILSGTPIQNNVLELWSLFDFL 1980
>02_05_0366 - 28313190-28313601,28313759-28314225,28315044-28315782,
28316548-28316615,28316693-28316757,28316922-28320162,
28320239-28320301,28320756-28320824,28321020-28321055,
28322035-28322280,28322531-28322569,28322695-28322816,
28322921-28323004,28323100-28323235,28323486-28323535,
28323620-28323756,28323863-28323951,28324847-28324954,
28325080-28325163,28325841-28325888,28326036-28326153,
28328262-28328347
Length = 2168
Score = 87.4 bits (207), Expect = 9e-18
Identities = 58/186 (31%), Positives = 97/186 (52%), Gaps = 11/186 (5%)
Frame = +2
Query: 128 NLLAHQKKGIQWMINREKNGRPNGGVLADDMGLGKTLSVLMLIAK---NNSVQLKTLIVC 298
+L +Q G+ W++ + R NG +LAD+MGLGKT+ + L+A + LIV
Sbjct: 667 SLREYQHIGLDWLVAMYEK-RLNG-ILADEMGLGKTIMTISLLAHLACEKGIWGPHLIVV 724
Query: 299 PLSLINHWVTENKKHNLNFNILKYYKSLNADTFE--------HYHIVVTTYDVLLAHFKL 454
P S++ +W TE K F IL Y+ S + ++H+ +TTY +++ K+
Sbjct: 725 PTSVMLNWETEFLKWCPAFKILTYFGSAKERKQKRQGWMKPNYFHVCITTYRLVIQDSKV 784
Query: 455 IKQNKHSSLFSTCWHRVVLDEAHIIKNCKTGVHNAACALTATNRWCITGTPIHNKHWDMY 634
K+ K W ++LDEAH+IKN K+ + R +TGTP+ N +++
Sbjct: 785 FKRKK--------WKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 836
Query: 635 SMINFL 652
S+++FL
Sbjct: 837 SLMHFL 842
>09_04_0287 -
16407324-16407551,16407647-16407748,16407824-16407922,
16408213-16408332,16408513-16408632,16408740-16408834,
16409109-16409365,16410134-16410309,16410401-16410587,
16410656-16411002,16411722-16411823,16411917-16412414,
16412520-16412624
Length = 811
Score = 86.2 bits (204), Expect = 2e-17
Identities = 54/181 (29%), Positives = 96/181 (53%), Gaps = 7/181 (3%)
Frame = +2
Query: 131 LLAHQKKGIQWMINREKNGRPNGGVLADDMGLGKTLSVLMLIA--KNNSVQLKTLIVCPL 304
L ++Q KG++W+I+ +NG G+LAD MGLGKT+ + +A K + LI+ PL
Sbjct: 282 LKSYQIKGVKWLISLWQNGL--NGILADQMGLGKTIQTIGFLAHLKGKGLDGPYLIIAPL 339
Query: 305 SLINHWVTENKKHNLNFNILKYY--KSLNADTFEHYHIVVTTYD---VLLAHFKLIKQNK 469
S +++WV E + + L Y+ K+ A+ + T D ++ ++ + K
Sbjct: 340 STLSNWVNEISRFVPSMTGLIYHGDKAARAEIRRKFMPKTTGPDFPLIVTSYEMAMSDAK 399
Query: 470 HSSLFSTCWHRVVLDEAHIIKNCKTGVHNAACALTATNRWCITGTPIHNKHWDMYSMINF 649
H + + W V++DE H +KN K + L N+ +TGTP+ N +++S++NF
Sbjct: 400 HLAHYK--WKYVIVDEGHRLKNSKCLLLRELKRLPMDNKLLLTGTPLQNNLAELWSLLNF 457
Query: 650 L 652
+
Sbjct: 458 I 458
>03_05_0952 +
29103879-29103983,29104103-29104600,29104693-29104794,
29105552-29105898,29105967-29106153,29106242-29106417,
29106976-29107065,29107066-29107322,29107593-29107687,
29107801-29107920,29108111-29108230,29108410-29108508,
29108588-29108689,29108884-29109111
Length = 841
Score = 85.4 bits (202), Expect = 4e-17
Identities = 55/187 (29%), Positives = 100/187 (53%), Gaps = 13/187 (6%)
Frame = +2
Query: 131 LLAHQKKGIQWMINREKNGRPNGGVLADDMGLGKTLSVLMLIA--KNNSVQLKTLIVCPL 304
L ++Q KG++W+I+ +NG G+LAD MGLGKT+ + +A K + LI+ PL
Sbjct: 282 LKSYQIKGVKWLISLWQNGL--NGILADQMGLGKTIQTIGFLAHLKGKGLDGPYLIIAPL 339
Query: 305 SLINHWVTENKKHNLNFNILKYY--KSLNAD---------TFEHYHIVVTTYDVLLAHFK 451
S +++WV E + + + Y+ K+ A+ T ++ ++VT+Y++ ++ K
Sbjct: 340 STLSNWVNEISRFVPSMTGVIYHGDKAARAEIRRKFMPKTTGPNFPLIVTSYEMAMSDAK 399
Query: 452 LIKQNKHSSLFSTCWHRVVLDEAHIIKNCKTGVHNAACALTATNRWCITGTPIHNKHWDM 631
+ K W V++DE H +KN K + L N+ +TGTP+ N ++
Sbjct: 400 QLAHYK--------WKYVIVDEGHRLKNSKCILLRELKRLPMDNKLLLTGTPLQNNLAEL 451
Query: 632 YSMINFL 652
+S++NF+
Sbjct: 452 WSLLNFI 458
>07_03_1567 - 27772815-27773302,27773471-27773561,27773641-27773988,
27774929-27775110,27775191-27775368,27775453-27775605,
27775993-27776232,27776369-27776449,27776485-27776730,
27777151-27777240,27777536-27777778,27778365-27778529,
27779017-27779080,27779162-27779286,27779383-27779476,
27779647-27779714,27779798-27779989,27780618-27780752,
27780847-27780934,27781014-27781107,27781484-27781547,
27781657-27781708,27781911-27782014,27782099-27782158,
27782687-27782770,27782892-27783125,27783442-27783864,
27784675-27784736,27784867-27785521
Length = 1700
Score = 85.0 bits (201), Expect = 5e-17
Identities = 51/182 (28%), Positives = 102/182 (56%), Gaps = 11/182 (6%)
Frame = +2
Query: 140 HQKKGIQWMINREKNGRPNGGVLADDMGLGKTL-SVLMLIAKNNSVQLKT--LIVCPLSL 310
+Q +G+ +++N +N +LAD+MGLGKT+ SV ML +N+ ++ L+V PLS
Sbjct: 600 YQLEGLNFLVNGWRND--TNVILADEMGLGKTIQSVSMLGFLHNAQEINGPFLVVVPLST 657
Query: 311 INHWVTENKKHNLNFNILKYYKSLNADTFEHYHIVVTT--------YDVLLAHFKLIKQN 466
+++W E +K + N++ Y + + H T + L+ +++I ++
Sbjct: 658 LSNWAKEFRKWLPDMNVVVYVGNRASREICQQHEFFTNKKGGRHVKFHTLITTYEVILKD 717
Query: 467 KHSSLFSTCWHRVVLDEAHIIKNCKTGVHNAACALTATNRWCITGTPIHNKHWDMYSMIN 646
K ++L W+ +++DEAH +KNC+ ++ + N+ ITGTP+ N +++++++
Sbjct: 718 K-AALSKIKWNYLMVDEAHRLKNCEASLYTTLLEFSTKNKLLITGTPLQNSVEELWALLH 776
Query: 647 FL 652
FL
Sbjct: 777 FL 778
>01_06_0006 -
25517892-25517935,25518156-25518276,25518598-25518733,
25519189-25519280,25519358-25519426,25519710-25519821,
25519897-25520015,25520302-25520355,25520811-25520891,
25520968-25521051,25521124-25521315,25521633-25521746,
25521832-25521978,25522066-25522302,25522762-25522810,
25522894-25523027,25523124-25523324,25523532-25523701,
25523773-25523875,25524198-25524361,25525015-25525055,
25525144-25525187
Length = 835
Score = 84.6 bits (200), Expect = 6e-17
Identities = 55/187 (29%), Positives = 101/187 (54%), Gaps = 14/187 (7%)
Frame = +2
Query: 128 NLLAHQKKGIQWM--INREKNGRPNGGVLADDMGLGKTLSVLMLIAK--NNSVQLKTLIV 295
+L HQK G++W+ ++ EK+G GG+LADDMGLGKT +A + + + LIV
Sbjct: 205 SLFPHQKDGLEWLWRLHCEKSG---GGILADDMGLGKTRQASAFLAGLFYSDLTQRVLIV 261
Query: 296 CPLSLINHWVTENKKHNLNFNILKYY---KSLN---ADTFEHYHIVVTTYDVLLAHFKLI 457
P ++++ W+ E K N +++ + K+ + A + +++ TYD++ + + +
Sbjct: 262 APGTILHQWIAELTKVGFNEDLIHSFWCAKTRHDSLAQVLKEGGVLLITYDLVRLYNEEL 321
Query: 458 K--QNKHSSLFSTC--WHRVVLDEAHIIKNCKTGVHNAACALTATNRWCITGTPIHNKHW 625
+K S + C W V+LDE H++KN T A +L+ +TGTP+ N
Sbjct: 322 NGMSSKSSKMRRACPSWDYVILDEGHVLKNPNTKNAAALKSLSRGQTVVLTGTPVQNNLS 381
Query: 626 DMYSMIN 646
+ +S+++
Sbjct: 382 EFHSLMS 388
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 83.8 bits (198), Expect = 1e-16
Identities = 56/193 (29%), Positives = 100/193 (51%), Gaps = 7/193 (3%)
Frame = +2
Query: 95 NDDPNFEHQTPNLLAHQKKGIQWMINREKNGRPNGGVLADDMGLGKTLSVLMLIA---KN 265
ND P++ Q L +Q G++W+++ N G+LAD+MGLGKT+ V+ L+ +
Sbjct: 1017 NDQPSYL-QGGKLREYQMNGLRWLVSLYNNNL--NGILADEMGLGKTVQVISLLCYLMET 1073
Query: 266 NSVQLKTLIVCPLSLINHWVTENKKHNLNFNILKYY--KSLNADTFEHYHIVVTTYDVLL 439
+ + L+V P S++ W +E + N + Y F+ IV ++VLL
Sbjct: 1074 KNDRGPFLVVVPSSVLPGWESELNFWAPSINKIAYAGPPEERRKLFKEM-IVHQKFNVLL 1132
Query: 440 AHFKLIKQNKHS--SLFSTCWHRVVLDEAHIIKNCKTGVHNAACALTATNRWCITGTPIH 613
++ + NKH L WH +++DE H IKN ++ +++R +TGTP+
Sbjct: 1133 TTYEYL-MNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYRSSHRLLLTGTPLQ 1191
Query: 614 NKHWDMYSMINFL 652
N ++++++NFL
Sbjct: 1192 NNLEELWALLNFL 1204
>05_03_0142 -
8866316-8866608,8867652-8867886,8868801-8869076,
8869166-8869292,8869869-8870116,8870189-8871104,
8871980-8872086,8872562-8872930
Length = 856
Score = 82.6 bits (195), Expect = 2e-16
Identities = 61/193 (31%), Positives = 99/193 (51%), Gaps = 19/193 (9%)
Frame = +2
Query: 131 LLAHQKKGIQWMINREKNGRPNGGVLADDMGLGKTLSVLM----LIAKNNSV--QL---- 280
LL HQ+ G++++ N +N +GGVL DDMGLGKT+ + +I K+N QL
Sbjct: 132 LLVHQRDGVRFLYNLYRNN--HGGVLGDDMGLGKTIQTIAFLSAVIGKDNDHGDQLVEGR 189
Query: 281 ---KTLIVCPLSLINHWVTENKKHNLNFNILKYYKSLNADTF------EHYHIVVTTYDV 433
LI+CP S+I +W EN+ + Y N D + IV+T++D
Sbjct: 190 KIAPILILCPTSVIRNW--ENEFAEWARCSVAVYHGPNRDLVLQKVETQRLEIVITSFDT 247
Query: 434 LLAHFKLIKQNKHSSLFSTCWHRVVLDEAHIIKNCKTGVHNAACALTATNRWCITGTPIH 613
H K+ L W VV+DEAH +KN K+ ++ A +T R+ +TGT +
Sbjct: 248 FRIHGKI--------LCGISWDLVVVDEAHRLKNEKSKLYTACLEITTRKRFGLTGTIMQ 299
Query: 614 NKHWDMYSMINFL 652
NK +++++ +++
Sbjct: 300 NKIMELFNLFDWI 312
>05_01_0360 +
2814139-2814627,2815203-2815334,2815480-2815583,
2816180-2816292,2818409-2818506,2818636-2818815,
2818893-2819114,2819270-2819404,2819489-2819771,
2819858-2819931,2820164-2820384,2820463-2820550,
2820651-2820744,2820827-2821015,2821369-2821400,
2821542-2821621,2821718-2821807,2821911-2821980,
2822240-2822285,2822370-2822428,2822588-2822753,
2822929-2823107,2823186-2823392,2823529-2823633,
2823701-2823703
Length = 1152
Score = 82.2 bits (194), Expect = 3e-16
Identities = 50/175 (28%), Positives = 91/175 (52%), Gaps = 4/175 (2%)
Frame = +2
Query: 140 HQKKGIQWMINREKNGRPNGGVLADDMGLGKTLSVLMLIAKNNSVQLKT---LIVCPLSL 310
+Q G+ W+I +NG G+LAD+MGLGKTL + L+ + + T ++V P S
Sbjct: 288 YQLAGLNWLIRLYENGI--NGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKST 345
Query: 311 INHWVTENKKHNLNFNILKYYKSLNADTFEHYHIVVT-TYDVLLAHFKLIKQNKHSSLFS 487
+ +W+ E ++ +K+ + +++V +DV + F++ + K ++L
Sbjct: 346 LGNWMKEIQRFCPVLRAIKFLGNPEERNHIRENLLVPGKFDVCVTSFEMAIKEK-TALKR 404
Query: 488 TCWHRVVLDEAHIIKNCKTGVHNAACALTATNRWCITGTPIHNKHWDMYSMINFL 652
W +++DEAH IKN + + R ITGTP+ N +++S++NFL
Sbjct: 405 FSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFL 459
>01_04_0010 -
15058175-15058195,15058320-15058430,15059031-15059246,
15059327-15059505,15059655-15059820,15059914-15059972,
15060065-15060107,15060285-15060354,15060458-15060547,
15060621-15060742,15060777-15060808,15060876-15061064,
15061148-15061241,15061325-15061412,15061498-15061718,
15061924-15061997,15062081-15062363,15062455-15062589,
15062721-15062942,15063029-15063208,15063305-15063402,
15063522-15063634,15064156-15064259,15064400-15064522,
15064857-15065192
Length = 1122
Score = 80.2 bits (189), Expect = 1e-15
Identities = 49/175 (28%), Positives = 90/175 (51%), Gaps = 4/175 (2%)
Frame = +2
Query: 140 HQKKGIQWMINREKNGRPNGGVLADDMGLGKTLSVLMLIAKNNSVQLKT---LIVCPLSL 310
+Q G+ W+I +NG G+LAD+MGLGKTL + L+ + + T ++V P S
Sbjct: 234 YQLAGLNWLIRLYENGI--NGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKST 291
Query: 311 INHWVTENKKHNLNFNILKYYKSLNADTFEHYHIVVT-TYDVLLAHFKLIKQNKHSSLFS 487
+ +W+ E ++ +K+ + +++ +DV + F++ + K ++L
Sbjct: 292 LGNWIKEIQRFCPILRAVKFLGNPEERNHIRENLLQPGKFDVCVTSFEMAIKEK-TTLKR 350
Query: 488 TCWHRVVLDEAHIIKNCKTGVHNAACALTATNRWCITGTPIHNKHWDMYSMINFL 652
W +++DEAH IKN + + R ITGTP+ N +++S++NFL
Sbjct: 351 FSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFL 405
>07_03_0481 - 18572206-18574314,18574591-18575185,18575304-18575371,
18577344-18577458,18578179-18578333,18578673-18580621,
18580691-18581372,18581550-18581621,18582558-18583199,
18583301-18583402,18585011-18585100
Length = 2192
Score = 78.2 bits (184), Expect = 5e-15
Identities = 53/197 (26%), Positives = 101/197 (51%), Gaps = 16/197 (8%)
Frame = +2
Query: 113 EHQTPNLLAHQKKGIQWMINREKNGRPNGGVLADDMGLGKTLSVLMLIAK---NNSVQLK 283
E Q L HQ + + W+ R+ + +LAD+MGLGKT+S ++ + L
Sbjct: 601 ELQGGMLFPHQLEALNWL--RKCWYKSKNVILADEMGLGKTVSACAFLSSLCCEYKINLP 658
Query: 284 TLIVCPLSLINHWVTENKKHNLNFNILKYYKSLNADT----FEHYHIVVTT--------- 424
L++ PLS + +W+ E + N+++Y+ S A + +E + +
Sbjct: 659 CLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSIIRQYEWHEGDASQMGKIKKSHK 718
Query: 425 YDVLLAHFKLIKQNKHSSLFSTCWHRVVLDEAHIIKNCKTGVHNAACALTATNRWCITGT 604
++VLL ++++ + + L S W +++DE H +KN + + + L+ +R +TGT
Sbjct: 719 FNVLLTTYEMVLVDA-AYLRSVSWEVLIVDEGHRLKNSSSKLFSLLNTLSFQHRVLLTGT 777
Query: 605 PIHNKHWDMYSMINFLQ 655
P+ N +MY+++NFLQ
Sbjct: 778 PLQNNIGEMYNLLNFLQ 794
>01_06_1556 - 38222071-38222708,38222795-38222822,38222950-38223070,
38223206-38223318,38223424-38223506,38223868-38223930,
38224100-38224254,38224411-38224580,38225101-38225189,
38225304-38225496,38225655-38225779,38226069-38226475,
38226855-38226919,38227414-38227692,38227772-38227845,
38228241-38228292,38228366-38228473,38228871-38228972,
38229100-38229173,38229262-38229435,38229667-38229771,
38229867-38229977,38230364-38230487
Length = 1150
Score = 73.7 bits (173), Expect = 1e-13
Identities = 52/184 (28%), Positives = 96/184 (52%), Gaps = 10/184 (5%)
Frame = +2
Query: 131 LLAHQKKGIQWMINREKNGRPNGGVLADDMGLGKTLSV---LMLIAKNNSVQLKTLIVCP 301
L +Q +G+QW+I+ K R +LAD+MGLGKT+ V L I K + LI+ P
Sbjct: 534 LYDYQLQGLQWLIDNFKTRR--SVILADEMGLGKTVQVVCFLYHIIKESLTASPALILAP 591
Query: 302 LSLINHWVTENKKHNLNFNILKYYKSLNADTFEHYHIVVTT-----YDVLLAHFKLIKQN 466
S++ W E + + N++ Y ++ H + ++ +D L+ ++ ++ +
Sbjct: 592 KSILLQWEKEFCQWASDLNVIVYQGDRDSRKCIQVHEMYSSDGKPLFDALVTSYEFVQID 651
Query: 467 KHSSLFSTCWHRVVLDEAHIIKNCKTGVHNAAC--ALTATNRWCITGTPIHNKHWDMYSM 640
K + L W +V+DEAH +K K + AAC + R +TGTP+ N +++S+
Sbjct: 652 K-AVLQKFKWSTIVIDEAHRMK--KLDCNLAACLKRYCSEFRLLLTGTPLQNNIMELFSL 708
Query: 641 INFL 652
++++
Sbjct: 709 LHYI 712
>02_05_0844 -
32144417-32144764,32145588-32145686,32146218-32146410,
32147049-32147107,32147189-32147263,32147557-32147670,
32147776-32147895,32148204-32148216,32148421-32148512,
32149078-32149164,32149254-32149328,32149630-32149680,
32149852-32149947,32150135-32150221,32150312-32150368,
32150475-32150600,32150709-32150949,32151028-32151114,
32151260-32151637,32152847-32153187
Length = 912
Score = 71.7 bits (168), Expect = 5e-13
Identities = 57/191 (29%), Positives = 96/191 (50%), Gaps = 18/191 (9%)
Frame = +2
Query: 131 LLAHQKKGIQWMINREK----NGRPNGGVLADDMGLGKTLSVLMLIAK-------NNSVQ 277
L HQ++G+Q+M + + +G +LADDMGLGKTL + L+ +
Sbjct: 235 LRPHQREGVQFMFDCVSGLLNDDGISGCILADDMGLGKTLQSITLLYTLLCQGFDAKPMV 294
Query: 278 LKTLIVCPLSLINHWVTENKKH-NLNFNILKYYKSLNADTF---EHYHIVVTTYDVLLAH 445
+ ++V P SL+++W +E K +L +S AD E + ++ VL+
Sbjct: 295 KRAVVVTPTSLVSNWESEIIKWLKGRVQLLALCESTRADVLSGIESFLKPLSRLQVLIVS 354
Query: 446 FKLIKQNKHSSLFS---TCWHRVVLDEAHIIKNCKTGVHNAACALTATNRWCITGTPIHN 616
++ + HSS F +C ++ DEAH +KN +T + A AL R ++GTP+ N
Sbjct: 355 YETFRM--HSSKFERPGSC-DLLICDEAHRLKNDQTLTNKALAALPCKRRILLSGTPMQN 411
Query: 617 KHWDMYSMINF 649
+ +SM+NF
Sbjct: 412 DLEEFFSMVNF 422
>01_07_0197 + 41912207-41912652,41913226-41913800,41913828-41915748,
41915836-41916049,41916143-41916394,41916469-41916528,
41916646-41916776,41916898-41917012,41917084-41917239
Length = 1289
Score = 67.7 bits (158), Expect = 8e-12
Identities = 44/118 (37%), Positives = 61/118 (51%), Gaps = 7/118 (5%)
Frame = +2
Query: 284 TLIVCPLSLINHWVTENKKH----NLNFNILKYYKSLNADTFE-HYHIVVTTYDVLLAHF 448
TLIV P +LI+HW T+ ++H LN + +K +A Y IV+TT+ L A +
Sbjct: 687 TLIVVPANLIDHWTTQIQRHVSSDTLNVYVWGDHKKPSAHNLAWDYDIVITTFSRLSAEW 746
Query: 449 KLIKQNKHSSLFSTCWHRVVLDEAHIIKN--CKTGVHNAACALTATNRWCITGTPIHN 616
K S L W RV+LDE H + + T A +L A+NRW +TGTP N
Sbjct: 747 ---GPKKRSVLKQIHWFRVILDEGHTLGSSLALTNKLQMAVSLVASNRWILTGTPTPN 801
>04_04_0822 +
28352941-28353825,28353863-28354016,28354714-28354754,
28355060-28355310,28355411-28355591,28356138-28356323,
28356396-28356569,28356992-28357150,28357424-28357501,
28357612-28357748,28357980-28358044,28358115-28358148,
28358216-28358372,28359135-28359196,28360041-28360118,
28360940-28361042
Length = 914
Score = 66.9 bits (156), Expect = 1e-11
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 16/220 (7%)
Frame = +2
Query: 41 TMDNYKLQLQKFFDQAPDNDDPNFEHQTPNLLAHQKKGIQWMINREKNGRPNGGVLADDM 220
+ D+ + Q D A +++ FE P L +Q G+ +++ + G +LAD+M
Sbjct: 298 SFDSMDVSEQDDVDAACTSEESEFE---PILKPYQLVGVNFLLLLHRKNI-GGAILADEM 353
Query: 221 GLGKTLSV---LMLIAKNNSVQLKTLIVCPLSLINHWVTENKKHNLNFNILKYY-KSLNA 388
GLGKT+ L L+ + LIVCP S++ +W E KK +F+I+ ++ A
Sbjct: 354 GLGKTVQAVTYLTLLRHLYNDPGPHLIVCPASVLENWERELKKWCPSFSIIMFHGAGRTA 413
Query: 389 DTFEHYHIVVTTY----DVLLAHFKLI------KQNKHSSLFSTCWHRVVLDEAHIIKNC 538
+ E + Y +VLL + L +++ +L W V++DEAH++K+
Sbjct: 414 YSKELSSLGKAGYPPPFNVLLVCYSLFERRSAQQKDDRKALKRWRWSCVLMDEAHVLKDK 473
Query: 539 KT--GVHNAACALTATNRWCITGTPIHNKHWDMYSMINFL 652
+ + A A A R +TGTP+ N +++S++ F+
Sbjct: 474 GSFRWRNLMAVAQHARQRLMLTGTPLQNDLHELWSLLEFM 513
>08_01_0540 +
4691929-4692014,4692915-4693125,4693756-4693885,
4695422-4696072,4696179-4696395,4697040-4697111,
4697167-4697257,4697367-4698363,4698914-4699044,
4699584-4699802,4700110-4700805,4700912-4701121,
4701606-4701710
Length = 1271
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/54 (53%), Positives = 36/54 (66%)
Frame = +2
Query: 494 WHRVVLDEAHIIKNCKTGVHNAACALTATNRWCITGTPIHNKHWDMYSMINFLQ 655
W RVVLDEA IKN +T V A C L A RWC++GTPI N ++YS +FL+
Sbjct: 723 WFRVVLDEAQTIKNFRTQVAKACCGLRAKRRWCLSGTPIQNAIDELYSYFHFLK 776
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Frame = +2
Query: 284 TLIVCPLSLINHW---VTENKKHNLNFNILKYY---KSLNADTFEHYHIVVTTYDVL 436
TL+VCP S++ W +T+ + ++L Y+ ++ + + Y +V+TTY ++
Sbjct: 606 TLVVCPASVLKQWANELTDKVGESAKLSVLVYHGGSRTKDPNELAKYDVVITTYTIV 662
>04_04_1247 -
32043776-32043880,32044296-32044505,32044595-32045101,
32045362-32045583,32046054-32046184,32046737-32047745,
32047830-32047904,32047995-32048066,32048153-32048328,
32048494-32048646,32048739-32049234
Length = 1051
Score = 66.1 bits (154), Expect = 2e-11
Identities = 30/54 (55%), Positives = 34/54 (62%)
Frame = +2
Query: 494 WHRVVLDEAHIIKNCKTGVHNAACALTATNRWCITGTPIHNKHWDMYSMINFLQ 655
W RVVLDEA IKN T V A C L A RWC++GTPI N D+YS FL+
Sbjct: 565 WFRVVLDEAQTIKNHNTQVARACCGLRAKRRWCLSGTPIQNTIDDLYSYFRFLK 618
Score = 58.0 bits (134), Expect = 6e-09
Identities = 25/52 (48%), Positives = 35/52 (67%)
Frame = +2
Query: 128 NLLAHQKKGIQWMINREKNGRPNGGVLADDMGLGKTLSVLMLIAKNNSVQLK 283
+LL HQ+ + WM++RE + +GG+LADD GLGKT+S + LI K Q K
Sbjct: 294 SLLKHQRIALAWMVSRENSSHCSGGILADDQGLGKTISTIALIQKERVEQSK 345
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Frame = +2
Query: 284 TLIVCPLSLINHWVTE---NKKHNLNFNILKYY---KSLNADTFEHYHIVVTTYDVL 436
TL+VCP S++ W +E + ++L Y+ ++ + Y +VVTTY ++
Sbjct: 447 TLVVCPASVLRQWASELAAKVTESSKLSVLVYHGGSRTKDPTELTKYDVVVTTYTIV 503
>01_06_0919 -
32993752-32993856,32994383-32994592,32994666-32995220,
32995705-32995926,32996381-32996511,32997456-32998353,
32998453-32998530,32998612-32998683,32998728-32998763,
32999413-33000353,33000531-33000659,33000751-33000894,
33000994-33001060,33002434-33002502,33003144-33003278
Length = 1263
Score = 63.3 bits (147), Expect = 2e-10
Identities = 29/59 (49%), Positives = 35/59 (59%)
Frame = +2
Query: 479 LFSTCWHRVVLDEAHIIKNCKTGVHNAACALTATNRWCITGTPIHNKHWDMYSMINFLQ 655
L W RV+LDEA IKN +T V A L A RWC++GTPI N D+YS FL+
Sbjct: 756 LAKVAWFRVILDEAQSIKNYRTQVARACWGLRAKRRWCLSGTPIQNAVEDLYSYFRFLR 814
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = +2
Query: 131 LLAHQKKGIQWMINREKNGRP-NGGVLADDMGLGKTLSVLMLIAKNNS 271
LL HQK + WM+ +E+NG +GG+LADD GLGKT+S + LI S
Sbjct: 527 LLRHQKIALSWMVQKERNGSSCSGGILADDQGLGKTVSTISLILTERS 574
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Frame = +2
Query: 284 TLIVCPLSLINHWVTE--NK-KHNLNFNILKYY---KSLNADTFEHYHIVVTTYDVL 436
TL+VCP S++ W E NK N L Y+ ++ + + Y +V+TTY ++
Sbjct: 642 TLVVCPTSVLRQWADELRNKVTSKANLTFLVYHGSNRTKDPNDLTKYDVVLTTYSIV 698
>07_03_0561 +
19485218-19485242,19485323-19486467,19487354-19487476,
19487553-19487626,19487886-19487946,19488285-19488370,
19488795-19488864,19489026-19489122,19489342-19489481,
19490225-19490308,19490313-19490346,19491833-19491951
Length = 685
Score = 61.7 bits (143), Expect = 5e-10
Identities = 26/61 (42%), Positives = 39/61 (63%)
Frame = +2
Query: 473 SSLFSTCWHRVVLDEAHIIKNCKTGVHNAACALTATNRWCITGTPIHNKHWDMYSMINFL 652
S L S W R++LDEAH IK+ + A AL + +W ++GTP+ N+ ++YS+I FL
Sbjct: 376 SPLHSVRWERIILDEAHFIKDRRCNTAKAIFALESEYKWALSGTPLQNRVGELYSLIRFL 435
Query: 653 Q 655
Q
Sbjct: 436 Q 436
Score = 48.0 bits (109), Expect = 7e-06
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 27/134 (20%)
Frame = +2
Query: 131 LLAHQKKGIQWMINREKNGRPNGGVLADDMGLGKTLSVLMLI-----------------A 259
LL QK+ + W + +E + GG+LAD+MG+GKT+ + L+ A
Sbjct: 158 LLRFQKEWLAWALAQEASPS-RGGILADEMGMGKTIQGISLVITARRLRPPAPPPRRRAA 216
Query: 260 KNNSVQLK-----TLIVCPLSLINHWVTENKKHNL--NFNILKYY---KSLNADTFEHYH 409
++ Q K TL+VCP+ + W E ++H + +L Y+ + F Y
Sbjct: 217 SSSQGQPKRWVGCTLVVCPVVAVIQWAQEIERHTAKDSVRVLVYHGGRRGAQKYDFNKYD 276
Query: 410 IVVTTYDVLLAHFK 451
V+TTY + A ++
Sbjct: 277 FVITTYSTIEADYR 290
>05_01_0318 -
2488529-2489196,2489773-2490372,2490620-2490773,
2490996-2491085,2491926-2492061,2492159-2492418,
2493448-2493846,2494482-2494661,2494728-2494922,
2496614-2496678,2497186-2497321,2497442-2497483,
2498351-2498689
Length = 1087
Score = 60.1 bits (139), Expect = 2e-09
Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 11/123 (8%)
Frame = +2
Query: 131 LLAHQKKGIQWMINREKNGRPNGGVLADDMGLGKTLSVLMLIA---KNNSVQLKTLIVCP 301
L +Q +G+QWM++ N G+LAD+MGLGKT+ + LIA + V LI+ P
Sbjct: 465 LRPYQLEGLQWMLSLFNNNL--NGILADEMGLGKTIQTIALIAYLLEKKEVTGPHLIIAP 522
Query: 302 LSLINHWVTENKKHNLNFNILKY------YKSLNADTF--EHYHIVVTTYDVLLAHFKLI 457
+++ +W E K + + Y K+L F +++++T YD++L K +
Sbjct: 523 KAVLPNWSNEFKTWAPSIGTILYDGRPDDRKALREKNFGQRQFNVLLTHYDLILKDLKFL 582
Query: 458 KQN 466
K+N
Sbjct: 583 KKN 585
>06_01_0584 -
4178391-4178732,4178854-4178915,4180361-4180481,
4180592-4180732,4180830-4180959,4182306-4182436,
4182528-4182601,4182680-4182741,4183135-4183209,
4184658-4184760,4184835-4184991,4185549-4185743,
4186204-4186282,4186697-4186806,4187249-4187374,
4187475-4187541,4187622-4187791,4187880-4188018,
4188361-4188522,4188672-4188772,4188852-4188994,
4189438-4189537,4190364-4190414,4191062-4191169,
4191279-4191494,4191585-4191721,4191820-4191915,
4192017-4192234,4192764-4192925,4193006-4193163,
4194221-4194379
Length = 1364
Score = 43.6 bits (98), Expect(2) = 2e-09
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +2
Query: 425 YDVLLAHFKLIKQNKHSSLFSTC-WHRVVLDEAHIIKNCKTGVHNAACALTATNRWCITG 601
+DVLL +++I N S++ T W +++DE H +KN + + +R +TG
Sbjct: 357 FDVLLTSYEMI--NMDSTVLKTIEWECMIVDEGHRLKNKDSKLFGQLKEYHTKHRVLLTG 414
Query: 602 TPIHNKHWDMYSMINFLQ 655
TP+ N +++ +++FL+
Sbjct: 415 TPVQNNLDELFMLMHFLE 432
Score = 35.9 bits (79), Expect(2) = 2e-09
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 203 VLADDMGLGKTLSVLMLIAKNNSVQLKT-LIVCPLSLINHWVTENKKHNLNFNILKYYKS 379
+L D+MGLGKT+ + + +L L+V PLS + +W E N++ Y+ S
Sbjct: 257 ILGDEMGLGKTIQSIAFLGSLFVDKLGPHLVVAPLSTLRNWEREFATWAPQMNVVMYFGS 316
>07_03_1696 -
28779455-28779733,28779813-28780074,28780805-28780956,
28781765-28781961,28782258-28782462,28782737-28782982,
28783603-28783719,28784206-28784397,28784480-28784693,
28784835-28784926,28784952-28785001,28785494-28785812,
28785908-28786068,28786407-28786650,28787212-28787467,
28787634-28787834,28788568-28788910,28789003-28789064,
28789645-28789851,28790170-28790978
Length = 1535
Score = 58.8 bits (136), Expect = 4e-09
Identities = 24/54 (44%), Positives = 36/54 (66%)
Frame = +2
Query: 494 WHRVVLDEAHIIKNCKTGVHNAACALTATNRWCITGTPIHNKHWDMYSMINFLQ 655
W R+ LDEA ++++ KT V A L A +RWCITGTPI + D++ ++ FL+
Sbjct: 554 WWRLCLDEAQMVESSKTSVTEMAMRLNAQHRWCITGTPIQRRLDDLFGLLRFLK 607
Score = 33.1 bits (72), Expect = 0.20
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +2
Query: 68 QKFFDQAPDNDDPNFEHQTPNLLAHQKKGIQWMINREKNGRPNGGVLADDMGLGKTLSVL 247
Q + AP +F H+ + + G M +GG+LAD+MGLGKT+ +L
Sbjct: 312 QHYVHSAPYCVPIDFMHKKSRMFYNPFNGNVSMHPEPSPPYVSGGILADEMGLGKTVELL 371
Query: 248 MLI 256
I
Sbjct: 372 ACI 374
>01_01_0020 +
147147-147313,148450-148548,148634-148742,148856-148927,
149056-149061,150811-150915,151048-151539,151629-152025,
152178-153646,154010-154450,154543-155214
Length = 1342
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/90 (31%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Frame = +2
Query: 131 LLAHQKKGIQWMINREKNGRPNGGVLADDMGLGKTLSVLMLIAK--NNSVQLKTLIVCPL 304
L +QK G+QW+ E + + GG++ D+MGLGKT+ VL + N+ + +++VCP+
Sbjct: 527 LFDYQKVGVQWLW--ELHCQRAGGIIGDEMGLGKTVQVLSFLGSLHNSGLYKPSIVVCPV 584
Query: 305 SLINHWVTENKKHNLNFNILKYYKSLNADT 394
+L+ W E + F + + S N+ +
Sbjct: 585 TLLQQWRREASRWYPKFKVEILHDSANSSS 614
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 494 WHRVVLDEAHIIKNCKTGVHNAACALTATNRWCITGTPIHNKHWDMYSMINFL 652
W VLDE H I+N + L +R +TG PI NK +++S+ +F+
Sbjct: 680 WGYAVLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKLSELWSLFDFV 732
>03_02_1012 +
13207907-13207990,13209196-13209280,13209402-13210186,
13210262-13210462,13210580-13210690,13211105-13211487,
13211594-13211702,13211786-13211866,13212088-13212156,
13212379-13212467,13212619-13212780,13212859-13212916,
13213143-13213373,13213516-13213662,13213779-13214333,
13214562-13214819,13215096-13215203,13215760-13215854,
13215946-13216102,13216466-13216666,13217542-13217670,
13218292-13218567
Length = 1457
Score = 54.8 bits (126), Expect = 6e-08
Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Frame = +2
Query: 131 LLAHQKKGIQWMINREKNGRPNGGVLADDMGLGKT---LSVLMLIAKNNSVQLKTLIVCP 301
L +Q KG+QW++N + G G+LAD+MGLGKT ++ L +A++ ++ L+V P
Sbjct: 569 LKEYQLKGLQWLVNCYEQGL--NGILADEMGLGKTVQAMAFLAHLAEDKNIWGPFLVVAP 626
Query: 302 LSLINHWVTE 331
S++N+W E
Sbjct: 627 ASVVNNWAEE 636
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/81 (28%), Positives = 40/81 (49%)
Frame = +2
Query: 410 IVVTTYDVLLAHFKLIKQNKHSSLFSTCWHRVVLDEAHIIKNCKTGVHNAACALTATNRW 589
+VV V+ + I N+ L W +VLDEA IK+ + + NR
Sbjct: 622 LVVAPASVVNNWAEEILVNEEKLLRRVKWQYMVLDEAQAIKSSSSQRWKTLLSFNCRNRL 681
Query: 590 CITGTPIHNKHWDMYSMINFL 652
+TGTPI N +++++++F+
Sbjct: 682 LLTGTPIQNNMAELWALLHFI 702
>02_01_0102 - 749122-749799,750123-750371,750753-750851,751380-751889,
752025-753905,754093-754296,754807-754899,755036-755122,
755241-755328,755533-755645,755943-757259,757398-758672,
759166-759273
Length = 2233
Score = 52.8 bits (121), Expect = 2e-07
Identities = 47/171 (27%), Positives = 84/171 (49%)
Frame = +2
Query: 140 HQKKGIQWMINREKNGRPNGGVLADDMGLGKTLSVLMLIAKNNSVQLKTLIVCPLSLINH 319
+Q G+QWM++ N G+LAD+MGLGKT+ V+ LIA ++ K L ++ +
Sbjct: 965 YQLVGLQWMLSLYNNKL--NGILADEMGLGKTVQVMSLIA--YLMEFKGNYGPHLIIVPN 1020
Query: 320 WVTENKKHNLNFNILKYYKSLNADTFEHYHIVVTTYDVLLAHFKLIKQNKHSSLFSTCWH 499
V N K L ++++VTTY+ F + ++K S + W
Sbjct: 1021 AVLVNWKEVLAVK---------------FNVLVTTYE-----FVMYDRSKLSRI---DWK 1057
Query: 500 RVVLDEAHIIKNCKTGVHNAACALTATNRWCITGTPIHNKHWDMYSMINFL 652
+++DEA +K+ ++ + R +TGTP+ N +++S++N L
Sbjct: 1058 YIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLL 1108
>03_01_0013 -
105281-105552,105762-105838,105839-106524,106655-106738,
106914-107114,107202-107309,107766-107855,108505-108551,
109096-109276,110010-110135,110220-110386,110877-111072
Length = 744
Score = 48.0 bits (109), Expect = 7e-06
Identities = 33/140 (23%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Frame = +2
Query: 272 VQLKTLIVCPLSLINHWVTENKKHNLNFNILKYY------KSLNADTFEHY-------HI 412
V + +++CPLS+ + W++E K + +++Y + L F+ H
Sbjct: 61 VNVLLVVLCPLSVTDGWLSEFNKFCPSLRVIQYVGDKLHRRDLRRMMFQDVQKSSSSSHS 120
Query: 413 VVTTYDVLLAHFKLIKQNKHSSLFSTCWHRVVLDEAHIIKNCKTGVHNA-ACALTATNRW 589
+DV++ + + ++ L WH VV+DEA +KN + ++N R
Sbjct: 121 TELPFDVMMTTYDIALMDQEF-LSQIPWHYVVIDEAQRLKNPSSVLYNVLEQRFIMPRRL 179
Query: 590 CITGTPIHNKHWDMYSMINF 649
+TGTPI N +++++++F
Sbjct: 180 LLTGTPIQNNLSELWALMHF 199
>10_08_0962 +
21880919-21880983,21881100-21881487,21881807-21881931,
21882374-21882374,21882891-21883115,21888956-21889083,
21889176-21889227,21890205-21890351,21890444-21890566,
21890648-21890722,21890812-21890931,21892546-21892632,
21893115-21893183,21893262-21893353,21893465-21893584,
21893725-21893767,21893848-21893910,21894091-21894162,
21894247-21894291,21894354-21894424,21894508-21894573,
21894715-21894799
Length = 753
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +2
Query: 131 LLAHQKKGIQWMINREKNGRPNGGVLADDMGLGKTLSVLMLI--AKNNSVQLKTLIVCPL 304
L +QK+GI+W+ + GG L D+MG+GKT V + V +I+CP+
Sbjct: 234 LHTYQKEGIKWLWTLHL--KKLGGALCDEMGMGKTRQVAAFLRGLLQADVIHNAMIICPV 291
Query: 305 SLINHWVTE 331
++I W E
Sbjct: 292 TVIETWRKE 300
>07_03_0149 - 14452654-14452666,14452943-14454699,14454886-14454990,
14455808-14455978,14456309-14456641,14456900-14457492,
14458864-14458906
Length = 1004
Score = 39.1 bits (87), Expect = 0.003
Identities = 37/189 (19%), Positives = 83/189 (43%), Gaps = 17/189 (8%)
Frame = +2
Query: 140 HQKKGIQWMINREKNGRPNGGVLADDMGLGKTLSVLMLIAK--NNSVQLKTLIVCPLSLI 313
HQ +G +++ +P G +LA G GKT ++ I + L+V P ++
Sbjct: 463 HQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLVVLPKGIL 522
Query: 314 NHWVTENKKHNLNFNILKYYKSLNADTFEHYHIVVTTYD----VLLAHFK----LIKQNK 469
W E ++ + L + S+ AD V+ +++ +L +K +I +
Sbjct: 523 GTWKREFQRWQVEDIPLYDFYSVKADKRTEQLEVLKSWEARMSILFLGYKQFSRIICGDG 582
Query: 470 HSSLFSTCWHR-------VVLDEAHIIKNCKTGVHNAACALTATNRWCITGTPIHNKHWD 628
++ + C R ++LDE H +N +T V + + + ++GT N +
Sbjct: 583 DGNIAAACRDRLLMVPNLLILDEGHTPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSE 642
Query: 629 MYSMINFLQ 655
++++++ ++
Sbjct: 643 VFNILDLVR 651
>06_01_1034 +
8110347-8110943,8111201-8111512,8111841-8112011,
8112780-8114576
Length = 958
Score = 38.7 bits (86), Expect = 0.004
Identities = 37/189 (19%), Positives = 83/189 (43%), Gaps = 17/189 (8%)
Frame = +2
Query: 140 HQKKGIQWMINREKNGRPNGGVLADDMGLGKTLSVLMLIAK--NNSVQLKTLIVCPLSLI 313
HQ +G +++ +P G +LA G GKT ++ I + L+V P ++
Sbjct: 408 HQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLVVLPKGIL 467
Query: 314 NHWVTENKKHNLNFNILKYYKSLNADTFEHYHIVVTTYD----VLLAHFK----LIKQNK 469
W E ++ + L + S+ AD V+ +++ +L +K +I +
Sbjct: 468 GTWKREFQRWQVEDIPLYDFYSVKADKRVEQLEVLKSWEAQMSILFLGYKQFSRIICGDG 527
Query: 470 HSSLFSTCWHR-------VVLDEAHIIKNCKTGVHNAACALTATNRWCITGTPIHNKHWD 628
++ + C R ++LDE H +N +T V + + + ++GT N +
Sbjct: 528 DGNIAAACRDRLLMVPNLLILDEGHTPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSE 587
Query: 629 MYSMINFLQ 655
++++++ ++
Sbjct: 588 VFNILDLVR 596
>07_03_1410 +
26363538-26363777,26365421-26365475,26365553-26365644,
26365732-26365787,26366026-26366101,26366790-26366856,
26367197-26367263,26368276-26368342,26368759-26368842,
26369749-26369904,26370641-26370718,26371323-26371391,
26371476-26371541,26371623-26371751,26372862-26372951,
26373306-26373371,26373768-26373836,26373903-26374007,
26374374-26374499,26374687-26374745,26374832-26374868,
26375370-26375519
Length = 667
Score = 38.3 bits (85), Expect = 0.005
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 5/179 (2%)
Frame = +2
Query: 131 LLAHQKKGIQWMINREKNGRPNGGVLADDMGLGKTLSVLMLIAKNNSVQLKTLIVCPLSL 310
L+ Q++G+++ + ++G ++AD+MGLGKTL + +A L++ P SL
Sbjct: 209 LMPFQREGVRFAL---QHGART--LIADEMGLGKTLQAI-AVASCLHDAWPVLVISPSSL 262
Query: 311 INHWVTENKKHNLNFNILKY---YKSLNADTFEHYHIVVTTYDVLLAHFKLIKQNKHSSL 481
HW + N Y Y + D V +YDV+ IK L
Sbjct: 263 RLHWASVVLPQTGGSNKAGYRLVYSNTKGDFNLDGVFNVISYDVV----PKIK----DML 314
Query: 482 FSTCWHRVVLDEAHIIKN--CKTGVHNAACALTATNRWCITGTPIHNKHWDMYSMINFL 652
+ V+ DE+H +KN K +H+ A ++GTP ++ ++++ + L
Sbjct: 315 LDLDFKIVIADESHFLKNAQAKRTMHSLPVLQKAKYVVLLSGTPALSRPIELFTQLQAL 373
>10_08_0259 +
16274430-16274747,16275180-16275242,16275329-16275424,
16275526-16275618,16276415-16276605,16276684-16276921,
16277805-16277900,16278324-16278404,16278532-16278939,
16279048-16279331,16279460-16279547,16279630-16279830,
16280032-16280118,16280119-16280238,16280536-16280708,
16281914-16282055,16282292-16282414,16282601-16282656,
16282735-16283038,16283154-16283283,16283491-16283549,
16283829-16284061,16285480-16285527,16285765-16285843,
16285925-16286169,16286338-16286722
Length = 1446
Score = 33.5 bits (73), Expect = 0.15
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Frame = +2
Query: 167 INREKNGRPNGG-VLADDMGLGKTLSVL-MLIAKNNSVQL---KTLIVCPLSLINHWVTE 331
+ + K+G G +LA +MGLGKT V+ L +QL LIV P++++++W E
Sbjct: 763 VKKVKSGDKGFGCILAHNMGLGKTFQVITFLYTVMRCIQLGLRTALIVTPVNVLHNWKKE 822
>08_01_0892 -
8778097-8778236,8778390-8778486,8778568-8778747,
8779138-8779247,8781153-8781294,8782298-8782686,
8782752-8782834,8783524-8785244,8785894-8786040,
8786121-8786264,8786669-8786741,8787413-8787633
Length = 1148
Score = 33.5 bits (73), Expect = 0.15
Identities = 35/193 (18%), Positives = 82/193 (42%), Gaps = 17/193 (8%)
Frame = +2
Query: 128 NLLAHQKKGIQWMINREKNGRPNGGVLADDMGLGKTLSVLMLIA--KNNSVQLKTLIVCP 301
N+ HQ +G ++++N P G +L G G+ ++ I + L+V P
Sbjct: 236 NIRPHQLEGFKFLVNNLVTDEPGGCILVHAPGSGEIFMLISFIQGFMARHFTARPLVVLP 295
Query: 302 LSLINHWVTENKKHNLNFNILKYYKSLNADTFEHYHIVVTTY----DVLLA---HF-KLI 457
++ W E ++ + L + S+ AD V+ ++ +L HF +++
Sbjct: 296 EGILGTWKREFQQWQVEDIPLYDFDSIKADNRVEQLEVLKSWSSKRSILFVGSKHFTQIV 355
Query: 458 KQNKHSSLFSTCWHR-------VVLDEAHIIKNCKTGVHNAACALTATNRWCITGTPIHN 616
++ + + C ++LDE H +T + +A + + ++GT HN
Sbjct: 356 CDDRDENAVAECRDTLLMVPSLLILDEGHTPSIDETDMLQSARKVQTPCKVVMSGTLFHN 415
Query: 617 KHWDMYSMINFLQ 655
++++ ++ ++
Sbjct: 416 HVKEVFNTLDLVR 428
>03_01_0455 + 3487354-3488090,3489172-3489255,3489942-3490554,
3491356-3491583,3492270-3492437,3492828-3494587,
3494667-3494670
Length = 1197
Score = 31.9 bits (69), Expect = 0.46
Identities = 36/190 (18%), Positives = 80/190 (42%), Gaps = 18/190 (9%)
Frame = +2
Query: 140 HQKKGIQWMI-NREKNGRPNGGVLADDMGLGKTLSVLMLIAK--NNSVQLKTLIVCPLSL 310
HQ +G +++ N P G +LA G GKT ++ + + LI+ P +
Sbjct: 659 HQVEGFNFLVKNLADENNPGGCILAHAPGSGKTFLIISFVHSFLAKYPAGRPLIILPKGI 718
Query: 311 INHWVTENKKHNLNFNILKYYKSLNADTFEHYHIVVTTYD----VLLAHFK----LIKQN 466
++ W TE ++ L + S AD V+ ++ +LL ++ ++ +
Sbjct: 719 LSTWRTEFLHWQVDDIPLYDFYSSKADKRSEQLKVLNLWEESRSILLLGYQQFACIVSDH 778
Query: 467 KHSSLFSTCWHR-------VVLDEAHIIKNCKTGVHNAACALTATNRWCITGTPIHNKHW 625
+ C + V+LDE H +N +T + + + + ++GT N
Sbjct: 779 TSDTEAIMCQEKLLKVPSLVILDEGHTPRNEETDLLTSLENIRTPRKVVLSGTLFQNHVR 838
Query: 626 DMYSMINFLQ 655
++++++ ++
Sbjct: 839 EVFNILKLVR 848
>07_03_1147 +
24349811-24350161,24351031-24351366,24353260-24353376,
24353585-24353647,24354066-24354139,24354216-24354306,
24354791-24354850,24355270-24355462,24356242-24356522,
24357435-24357536,24357664-24357774,24358410-24358475,
24358562-24358660,24358757-24358788,24359171-24359274,
24359380-24359507,24359625-24359756,24360051-24360359,
24360887-24361071,24361161-24361263,24361407-24361552,
24361748-24361827,24361901-24362103
Length = 1121
Score = 31.5 bits (68), Expect = 0.61
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +2
Query: 113 EHQTPNLLAHQKKGIQWMINREKNGRPNGGVLADDMGLGKTLSVLMLIAK 262
+H LL Q +G+++ + R +GR ++AD+MGLGKTL L++K
Sbjct: 192 QHLRDALLPFQLEGVKFGLRR--HGRC---LIADEMGLGKTLQHFSLLSK 236
>05_04_0194 + 18949268-18951514,18952063-18952215,18952304-18954241
Length = 1445
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +2
Query: 503 VVLDEAHIIKNCKTGVHNAACALTATNRWCITGTPIHNKHWDMYSMI 643
+VLDE H +N ++ + + R ++GTP N ++Y+++
Sbjct: 1026 LVLDEGHTPRNERSVIWKTLGKVKTEKRIILSGTPFQNNFLELYNIL 1072
>10_01_0048 - 659107-660402,661650-661867,662299-662335
Length = 516
Score = 28.3 bits (60), Expect = 5.7
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = +2
Query: 62 QLQKFFDQAPDNDDP---NFEHQTPNLLAHQKKGIQWMINREKNGRPNGGVLADDMGLGK 232
QL+ F++QAPD+ H T +L ++ + +++ + G +ADD+ G
Sbjct: 424 QLEFFYNQAPDSMRSLCSALGHMTCSLGSYLSSVVVTVVSHATARGGSPGWIADDIDDGH 483
Query: 233 TLSVLMLIAKNNSVQLKTLIVC 298
L+A +S+ L I C
Sbjct: 484 LDRFFWLVAGLSSINLVVFICC 505
>01_05_0575 + 23372759-23373676,23373798-23373941,23374065-23374427
Length = 474
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -1
Query: 564 HAALCTPVLQFLIICASSKTTRCQQVENRLECLFCLIN 451
H C+PVLQ L + +S R + L+C+ ++
Sbjct: 205 HLLACSPVLQSLALALNSHPNRVRLCSQSLQCVLLFLS 242
>09_06_0026 + 20312364-20312687,20312780-20312950
Length = 164
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 625 PVFVVDRCAGDAPSVRC 575
P +VDRC G AP+ RC
Sbjct: 3 PTQLVDRCGGGAPASRC 19
>05_05_0252 -
23621592-23621912,23621958-23622317,23622979-23623059,
23623262-23623633
Length = 377
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -3
Query: 622 VFVVDRCAGDAPSV 581
VFVVD CAGD P+V
Sbjct: 226 VFVVDYCAGDEPTV 239
>01_06_1436 - 37353741-37354525,37356508-37356619
Length = 298
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +2
Query: 164 MINREKN--GRPNGGVLADDMGLGKTLSVLMLIAKNNSVQLKTLIVCPLSLI 313
M N++ N GRP G L LG+ L + +L+ K S L VC + +I
Sbjct: 244 MENKDPNVRGRPAGSNLGSADNLGQMLEIGLLLQKALSTLLIDCSVCAVIMI 295
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,849,466
Number of Sequences: 37544
Number of extensions: 370186
Number of successful extensions: 1174
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1126
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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