Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20l13
         (405 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   2.0  
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    21   4.6  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   4.6  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    21   4.6  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = +1

Query: 85  FTALIVNIVGGAVLCMG 135
           + A++ +I+ GA+ C+G
Sbjct: 86  YPAIVADILSGAIACIG 102


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -2

Query: 212 EAAMLPAIIPDAL 174
           EAA+L  +IPDAL
Sbjct: 56  EAAILRDVIPDAL 68


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 329 LLLVNIFWI*NVLNSEINM 385
           LLLV + W+ +    EINM
Sbjct: 354 LLLVELSWMNDEAQQEINM 372


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -2

Query: 212 EAAMLPAIIPDAL 174
           EAA+L  +IPDAL
Sbjct: 56  EAAILRDVIPDAL 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,921
Number of Sequences: 336
Number of extensions: 2145
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8752267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)