Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20l08
         (523 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         28   0.22 
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         28   0.22 
AJ276487-1|CAB90819.1|  375|Anopheles gambiae serine protease pr...    25   1.5  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    25   1.5  
U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    23   4.7  
L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...    23   8.2  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 27.9 bits (59), Expect = 0.22
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = +2

Query: 239 DRKGFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATL 406
           DR      Y++ K  +K A +  +RP  A +   L ++K     N Y T+  + TL
Sbjct: 476 DRPSSGPRYRRTKQPKKRADSEEKRPRTAFSNAQLQRLKNEFNENRYLTEKRRQTL 531


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 27.9 bits (59), Expect = 0.22
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = +2

Query: 239 DRKGFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATL 406
           DR      Y++ K  +K A +  +RP  A +   L ++K     N Y T+  + TL
Sbjct: 476 DRPSSGPRYRRTKQPKKRADSEEKRPRTAFSNAQLQRLKNEFNENRYLTEKRRQTL 531


>AJ276487-1|CAB90819.1|  375|Anopheles gambiae serine protease
          protein.
          Length = 375

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 56 KPISTPNTTCSQCVR 12
          KP +TPN T  +CVR
Sbjct: 28 KPCTTPNGTAGRCVR 42


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +1

Query: 73  VVTELDDHPQQQCIPCEEAQYQKAVQQGAEQCD*PPLLQVQRLDSQESR 219
           V  +L    QQQ  P ++ Q Q+  QQ   +   PP L+ QR   Q  +
Sbjct: 265 VPPQLRQQRQQQQRPRQQQQQQQQQQQQQGERYVPPQLRQQRQQQQHQQ 313


>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 387 SVR*WLAFNNLFTLYSDLLAPALN 316
           +V+ WLA NN+ T+    L+P LN
Sbjct: 163 TVQTWLADNNVKTMKWPALSPDLN 186


>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 408 VVLQPSSAPRGPSKQKRLRQP 470
           ++ +P    R P+KQKR R P
Sbjct: 98  ILPKPMRGRRDPNKQKRPRSP 118


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 547,683
Number of Sequences: 2352
Number of extensions: 11751
Number of successful extensions: 62
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)