Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20l06
         (628 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071329-1|AAL48951.1|  210|Drosophila melanogaster RE34924p pro...   337   8e-93
AE013599-1201|AAF58728.1|  210|Drosophila melanogaster CG11979-P...   337   8e-93
AY051458-1|AAK92882.1|  459|Drosophila melanogaster GH13040p pro...    28   9.0  
AE013599-1044|AAM68775.1|  459|Drosophila melanogaster CG12214-P...    28   9.0  
AE013599-1043|AAF58828.1|  459|Drosophila melanogaster CG12214-P...    28   9.0  

>AY071329-1|AAL48951.1|  210|Drosophila melanogaster RE34924p
           protein.
          Length = 210

 Score =  337 bits (828), Expect = 8e-93
 Identities = 158/171 (92%), Positives = 166/171 (97%)
 Frame = +1

Query: 115 MDDDAETYKLWRIRKTVMQLCHDRGYLVTQDELDQTLEQFKEQFGDKPSEKRPARSDLIV 294
           MDD+AETYKLWRIRKT+MQL HDRGYLVTQDELDQTLEQFKE FGDKPSEKRPARSDLIV
Sbjct: 1   MDDEAETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKEMFGDKPSEKRPARSDLIV 60

Query: 295 LVAHNDDPTDQMFVFFPDEAKIGIKTIKTYCTRMQEENIHRAIVVVQAGMSPSAKQSLVD 474
           LVAHNDDPTDQMFVFFP+E KIGIKTIKTYCTRMQEENIHRAIVVVQ GM+PSAKQSLVD
Sbjct: 61  LVAHNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSLVD 120

Query: 475 MAPKYILEQFLESELLINITEHELVPEHIVLTPDEKQELLARYKLKENMLM 627
           MAPKYILEQFLESELLINITEHELVPEH+V+T +EKQELL+RYKLKENMLM
Sbjct: 121 MAPKYILEQFLESELLINITEHELVPEHVVMTVEEKQELLSRYKLKENMLM 171


>AE013599-1201|AAF58728.1|  210|Drosophila melanogaster CG11979-PA
           protein.
          Length = 210

 Score =  337 bits (828), Expect = 8e-93
 Identities = 158/171 (92%), Positives = 166/171 (97%)
 Frame = +1

Query: 115 MDDDAETYKLWRIRKTVMQLCHDRGYLVTQDELDQTLEQFKEQFGDKPSEKRPARSDLIV 294
           MDD+AETYKLWRIRKT+MQL HDRGYLVTQDELDQTLEQFKE FGDKPSEKRPARSDLIV
Sbjct: 1   MDDEAETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKEMFGDKPSEKRPARSDLIV 60

Query: 295 LVAHNDDPTDQMFVFFPDEAKIGIKTIKTYCTRMQEENIHRAIVVVQAGMSPSAKQSLVD 474
           LVAHNDDPTDQMFVFFP+E KIGIKTIKTYCTRMQEENIHRAIVVVQ GM+PSAKQSLVD
Sbjct: 61  LVAHNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSLVD 120

Query: 475 MAPKYILEQFLESELLINITEHELVPEHIVLTPDEKQELLARYKLKENMLM 627
           MAPKYILEQFLESELLINITEHELVPEH+V+T +EKQELL+RYKLKENMLM
Sbjct: 121 MAPKYILEQFLESELLINITEHELVPEHVVMTVEEKQELLSRYKLKENMLM 171


>AY051458-1|AAK92882.1|  459|Drosophila melanogaster GH13040p
           protein.
          Length = 459

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +1

Query: 187 GYLVTQDELDQTLEQFKEQFGDKPSEKRPARSDLIVLVAHNDDP 318
           G  ++ DE   +   F   + DKP E+RPAR   ++ +    DP
Sbjct: 324 GGKISSDERVDSERAFVRYYMDKPEEERPARYQELLQIHGKLDP 367


>AE013599-1044|AAM68775.1|  459|Drosophila melanogaster CG12214-PB,
           isoform B protein.
          Length = 459

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +1

Query: 187 GYLVTQDELDQTLEQFKEQFGDKPSEKRPARSDLIVLVAHNDDP 318
           G  ++ DE   +   F   + DKP E+RPAR   ++ +    DP
Sbjct: 324 GGKISSDERVDSERAFVRYYMDKPEEERPARYQELLQIHGKLDP 367


>AE013599-1043|AAF58828.1|  459|Drosophila melanogaster CG12214-PA,
           isoform A protein.
          Length = 459

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +1

Query: 187 GYLVTQDELDQTLEQFKEQFGDKPSEKRPARSDLIVLVAHNDDP 318
           G  ++ DE   +   F   + DKP E+RPAR   ++ +    DP
Sbjct: 324 GGKISSDERVDSERAFVRYYMDKPEEERPARYQELLQIHGKLDP 367


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,416,008
Number of Sequences: 53049
Number of extensions: 611075
Number of successful extensions: 1497
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1497
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)