Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20l05
(572 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 206 1e-53
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 206 1e-53
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 206 1e-53
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 206 1e-53
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 136 3e-32
BT010233-1|AAQ23551.1| 947|Drosophila melanogaster RE59472p pro... 36 0.039
BT003626-1|AAO39629.1| 947|Drosophila melanogaster GH01416p pro... 36 0.039
AY166752-1|AAN85714.1| 1400|Drosophila melanogaster loechrig iso... 36 0.039
AY070541-1|AAL48012.1| 1400|Drosophila melanogaster LD22662p pro... 36 0.039
AE014297-2948|AAF55864.2| 1400|Drosophila melanogaster CG17299-P... 36 0.039
AE014297-2944|AAF55860.2| 947|Drosophila melanogaster CG17299-P... 36 0.039
AE014297-2943|AAN13851.1| 947|Drosophila melanogaster CG17299-P... 36 0.039
D21203-1|BAA04745.2| 1408|Drosophila melanogaster large Forked p... 31 1.1
D17528-1|BAA04479.1| 604|Drosophila melanogaster small forked p... 31 1.1
AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p pro... 31 1.5
AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-P... 31 1.5
AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-P... 31 1.5
DQ066624-1|AAY83339.1| 265|Drosophila melanogaster HDC10856 pro... 30 1.9
BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p pro... 29 3.4
AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-P... 29 3.4
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 206 bits (504), Expect = 1e-53
Identities = 99/161 (61%), Positives = 116/161 (72%)
Frame = +3
Query: 90 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 269
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 270 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 449
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNV 120
Query: 450 XXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKV 572
Q++GH+I+ + E PLVV+D+V
Sbjct: 121 NQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEV 161
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 206 bits (504), Expect = 1e-53
Identities = 99/161 (61%), Positives = 116/161 (72%)
Frame = +3
Query: 90 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 269
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 270 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 449
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNV 120
Query: 450 XXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKV 572
Q++GH+I+ + E PLVV+D+V
Sbjct: 121 NQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEV 161
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 206 bits (504), Expect = 1e-53
Identities = 99/161 (61%), Positives = 116/161 (72%)
Frame = +3
Query: 90 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 269
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 270 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 449
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNV 120
Query: 450 XXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKV 572
Q++GH+I+ + E PLVV+D+V
Sbjct: 121 NQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEV 161
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 206 bits (504), Expect = 1e-53
Identities = 99/161 (61%), Positives = 116/161 (72%)
Frame = +3
Query: 90 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 269
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 270 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 449
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNV 120
Query: 450 XXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKV 572
Q++GH+I+ + E PLVV+D+V
Sbjct: 121 NQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEV 161
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 136 bits (328), Expect = 3e-32
Identities = 62/99 (62%), Positives = 70/99 (70%)
Frame = +3
Query: 276 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 455
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 1 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRRVNVNQ 60
Query: 456 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKV 572
Q++GH+I+ + E PLVV+D+V
Sbjct: 61 RRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEV 99
>BT010233-1|AAQ23551.1| 947|Drosophila melanogaster RE59472p
protein.
Length = 947
Score = 35.9 bits (79), Expect = 0.039
Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Frame = +3
Query: 144 TVQGAAKP--LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 317
TV G A P P +F RP +D K+ P A T + S GTG A
Sbjct: 217 TVHGIASPNRRPTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPAT 275
Query: 318 ARIPRVRGGGTHRSGQGAFGNMCRGGRM 401
+ GG +GQGA G GG M
Sbjct: 276 SSAAGGAGGAAAAAGQGAAGG--AGGLM 301
>BT003626-1|AAO39629.1| 947|Drosophila melanogaster GH01416p
protein.
Length = 947
Score = 35.9 bits (79), Expect = 0.039
Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Frame = +3
Query: 144 TVQGAAKP--LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 317
TV G A P P +F RP +D K+ P A T + S GTG A
Sbjct: 217 TVHGIASPNRRPTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPAT 275
Query: 318 ARIPRVRGGGTHRSGQGAFGNMCRGGRM 401
+ GG +GQGA G GG M
Sbjct: 276 SSAAGGAGGAAAAAGQGAAGG--AGGLM 301
>AY166752-1|AAN85714.1| 1400|Drosophila melanogaster loechrig
isoform I protein.
Length = 1400
Score = 35.9 bits (79), Expect = 0.039
Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Frame = +3
Query: 144 TVQGAAKP--LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 317
TV G A P P +F RP +D K+ P A T + S GTG A
Sbjct: 670 TVHGIASPNRRPTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPAT 728
Query: 318 ARIPRVRGGGTHRSGQGAFGNMCRGGRM 401
+ GG +GQGA G GG M
Sbjct: 729 SSAAGGAGGAAAAAGQGAAGG--AGGLM 754
>AY070541-1|AAL48012.1| 1400|Drosophila melanogaster LD22662p
protein.
Length = 1400
Score = 35.9 bits (79), Expect = 0.039
Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Frame = +3
Query: 144 TVQGAAKP--LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 317
TV G A P P +F RP +D K+ P A T + S GTG A
Sbjct: 670 TVHGIASPNRRPTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPAT 728
Query: 318 ARIPRVRGGGTHRSGQGAFGNMCRGGRM 401
+ GG +GQGA G GG M
Sbjct: 729 SSAAGGAGGAAAAAGQGAAGG--AGGLM 754
>AE014297-2948|AAF55864.2| 1400|Drosophila melanogaster CG17299-PF,
isoform F protein.
Length = 1400
Score = 35.9 bits (79), Expect = 0.039
Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Frame = +3
Query: 144 TVQGAAKP--LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 317
TV G A P P +F RP +D K+ P A T + S GTG A
Sbjct: 670 TVHGIASPNRRPTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPAT 728
Query: 318 ARIPRVRGGGTHRSGQGAFGNMCRGGRM 401
+ GG +GQGA G GG M
Sbjct: 729 SSAAGGAGGAAAAAGQGAAGG--AGGLM 754
>AE014297-2944|AAF55860.2| 947|Drosophila melanogaster CG17299-PB,
isoform B protein.
Length = 947
Score = 35.9 bits (79), Expect = 0.039
Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Frame = +3
Query: 144 TVQGAAKP--LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 317
TV G A P P +F RP +D K+ P A T + S GTG A
Sbjct: 217 TVHGIASPNRRPTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPAT 275
Query: 318 ARIPRVRGGGTHRSGQGAFGNMCRGGRM 401
+ GG +GQGA G GG M
Sbjct: 276 SSAAGGAGGAAAAAGQGAAGG--AGGLM 301
>AE014297-2943|AAN13851.1| 947|Drosophila melanogaster CG17299-PA,
isoform A protein.
Length = 947
Score = 35.9 bits (79), Expect = 0.039
Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Frame = +3
Query: 144 TVQGAAKP--LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 317
TV G A P P +F RP +D K+ P A T + S GTG A
Sbjct: 217 TVHGIASPNRRPTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPAT 275
Query: 318 ARIPRVRGGGTHRSGQGAFGNMCRGGRM 401
+ GG +GQGA G GG M
Sbjct: 276 SSAAGGAGGAAAAAGQGAAGG--AGGLM 301
>D21203-1|BAA04745.2| 1408|Drosophila melanogaster large Forked
protein protein.
Length = 1408
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = -3
Query: 396 VHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 265
+ TC R P + H H H H +P H G+QPP
Sbjct: 1010 IRRTTCRYRSPSSRHP-HQHQHHPHPHPHPHHPHQLHGMGEQPP 1052
>D17528-1|BAA04479.1| 604|Drosophila melanogaster small forked
protein protein.
Length = 604
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = -3
Query: 396 VHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 265
+ TC R P + H H H H +P H G+QPP
Sbjct: 209 IRRTTCRYRSPSSRHP-HQHQHHPHPHPHPHHPHQLHGMGEQPP 251
>AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p
protein.
Length = 872
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 308 TCCRP-NSACPWWWYS*VRSGC 370
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-PB,
isoform B protein.
Length = 271
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 308 TCCRP-NSACPWWWYS*VRSGC 370
TCC P ++ CPW WY +GC
Sbjct: 117 TCCMPCSNQCPWSWYYNPCTGC 138
>AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-PA,
isoform A protein.
Length = 872
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 308 TCCRP-NSACPWWWYS*VRSGC 370
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>DQ066624-1|AAY83339.1| 265|Drosophila melanogaster HDC10856
protein.
Length = 265
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -1
Query: 563 GYNQGKLGNLFNNVSSSLNERWDAGSSNGCRQGR 462
GYN+G+ GN +N +++ N + G G QGR
Sbjct: 200 GYNRGRNGNNYNRGNNNSNNYNNRGGRRGRNQGR 233
>BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p
protein.
Length = 1953
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +2
Query: 95 SIGSPTFSVGVFREE*DGAGCSQAPPVRVQG--AHPSGPG 208
++GSP ++VG G G S APP V AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326
>AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-PC
protein.
Length = 2528
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +2
Query: 95 SIGSPTFSVGVFREE*DGAGCSQAPPVRVQG--AHPSGPG 208
++GSP ++VG G G S APP V AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,164,811
Number of Sequences: 53049
Number of extensions: 570492
Number of successful extensions: 3808
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3663
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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