Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20l03
(694 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC010354-1|AAH10354.1| 345|Homo sapiens growth hormone inducibl... 101 2e-21
AY358824-1|AAQ89183.1| 345|Homo sapiens PTD010 protein. 101 2e-21
AL603756-1|CAH72660.1| 345|Homo sapiens growth hormone inducibl... 101 2e-21
AF131820-1|AAD20052.1| 345|Homo sapiens Unknown protein. 101 2e-21
AB009685-1|BAA93049.1| 345|Homo sapiens DERP2 protein. 101 2e-21
CR533519-1|CAG38550.1| 345|Homo sapiens GHITM protein. 99 7e-21
AF060923-1|AAG43135.1| 345|Homo sapiens My021 protein protein. 99 2e-20
AL603756-2|CAH72661.1| 325|Homo sapiens growth hormone inducibl... 91 3e-18
BC071696-1|AAH71696.1| 498|Homo sapiens FLJ10404 protein protein. 34 0.42
AY330211-1|AAP92113.1| 605|Homo sapiens netrin 4 protein. 30 9.0
AF297711-1|AAG53651.1| 628|Homo sapiens netrin 4 precursor prot... 30 9.0
AF278532-1|AAG30822.1| 628|Homo sapiens beta-netrin protein. 30 9.0
>BC010354-1|AAH10354.1| 345|Homo sapiens growth hormone inducible
transmembrane protein protein.
Length = 345
Score = 101 bits (242), Expect = 2e-21
Identities = 60/163 (36%), Positives = 91/163 (55%), Gaps = 12/163 (7%)
Frame = +1
Query: 223 SPVPQNFVPRNYVVRNYARE--PRTRVATRSQPT---LRERLMAPAGPNAFXXXXXXXXX 387
SPV +N + +N + +RE +TR+ R T L+E + P+ F
Sbjct: 25 SPVVKNSITKNQWLLTPSREYATKTRIGIRRGRTGQELKEAALEPSMEKIFKIDQMGRWF 84
Query: 388 XXXXXXXXX---CYYGSGVKP--GTLQESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVA 552
CYYG G+ G ++++ +WPQYVK+RI +TY Y+AGS+ LTA SA+A
Sbjct: 85 VAGGAAVGLGALCYYGLGLSNEIGAIEKAVIWPQYVKDRIHSTYMYLAGSIGLTALSAIA 144
Query: 553 VFRTPALLNLVARNGWMSIIVTLGLMIGSGMVVRGMEY--TPG 675
+ RTP L+N + R W++I VT M+G+GM+VR + Y +PG
Sbjct: 145 ISRTPVLMNFMMRGSWVTIGVTFAAMVGAGMLVRSIPYDQSPG 187
>AY358824-1|AAQ89183.1| 345|Homo sapiens PTD010 protein.
Length = 345
Score = 101 bits (242), Expect = 2e-21
Identities = 60/163 (36%), Positives = 91/163 (55%), Gaps = 12/163 (7%)
Frame = +1
Query: 223 SPVPQNFVPRNYVVRNYARE--PRTRVATRSQPT---LRERLMAPAGPNAFXXXXXXXXX 387
SPV +N + +N + +RE +TR+ R T L+E + P+ F
Sbjct: 25 SPVVKNSITKNQWLLTPSREYATKTRIGIRRGRTGQELKEAALEPSMEKIFKIDQMGRWF 84
Query: 388 XXXXXXXXX---CYYGSGVKP--GTLQESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVA 552
CYYG G+ G ++++ +WPQYVK+RI +TY Y+AGS+ LTA SA+A
Sbjct: 85 VAGGAAVGLGALCYYGLGLSNEIGAIEKAVIWPQYVKDRIHSTYMYLAGSIGLTALSAIA 144
Query: 553 VFRTPALLNLVARNGWMSIIVTLGLMIGSGMVVRGMEY--TPG 675
+ RTP L+N + R W++I VT M+G+GM+VR + Y +PG
Sbjct: 145 ISRTPVLMNFMMRGSWVTIGVTFAAMVGAGMLVRSIPYDQSPG 187
>AL603756-1|CAH72660.1| 345|Homo sapiens growth hormone inducible
transmembrane protein protein.
Length = 345
Score = 101 bits (242), Expect = 2e-21
Identities = 60/163 (36%), Positives = 91/163 (55%), Gaps = 12/163 (7%)
Frame = +1
Query: 223 SPVPQNFVPRNYVVRNYARE--PRTRVATRSQPT---LRERLMAPAGPNAFXXXXXXXXX 387
SPV +N + +N + +RE +TR+ R T L+E + P+ F
Sbjct: 25 SPVVKNSITKNQWLLTPSREYATKTRIGIRRGRTGQELKEAALEPSMEKIFKIDQMGRWF 84
Query: 388 XXXXXXXXX---CYYGSGVKP--GTLQESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVA 552
CYYG G+ G ++++ +WPQYVK+RI +TY Y+AGS+ LTA SA+A
Sbjct: 85 VAGGAAVGLGALCYYGLGLSNEIGAIEKAVIWPQYVKDRIHSTYMYLAGSIGLTALSAIA 144
Query: 553 VFRTPALLNLVARNGWMSIIVTLGLMIGSGMVVRGMEY--TPG 675
+ RTP L+N + R W++I VT M+G+GM+VR + Y +PG
Sbjct: 145 ISRTPVLMNFMMRGSWVTIGVTFAAMVGAGMLVRSIPYDQSPG 187
>AF131820-1|AAD20052.1| 345|Homo sapiens Unknown protein.
Length = 345
Score = 101 bits (242), Expect = 2e-21
Identities = 60/163 (36%), Positives = 91/163 (55%), Gaps = 12/163 (7%)
Frame = +1
Query: 223 SPVPQNFVPRNYVVRNYARE--PRTRVATRSQPT---LRERLMAPAGPNAFXXXXXXXXX 387
SPV +N + +N + +RE +TR+ R T L+E + P+ F
Sbjct: 25 SPVVKNSITKNQWLLTPSREYATKTRIGIRRGRTGQELKEAALEPSMEKIFKIDQMGRWF 84
Query: 388 XXXXXXXXX---CYYGSGVKP--GTLQESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVA 552
CYYG G+ G ++++ +WPQYVK+RI +TY Y+AGS+ LTA SA+A
Sbjct: 85 VAGGAAVGLGALCYYGLGLSNEIGAIEKAVIWPQYVKDRIHSTYMYLAGSIGLTALSAIA 144
Query: 553 VFRTPALLNLVARNGWMSIIVTLGLMIGSGMVVRGMEY--TPG 675
+ RTP L+N + R W++I VT M+G+GM+VR + Y +PG
Sbjct: 145 ISRTPVLMNFMMRGSWVTIGVTFAAMVGAGMLVRSIPYDQSPG 187
>AB009685-1|BAA93049.1| 345|Homo sapiens DERP2 protein.
Length = 345
Score = 101 bits (242), Expect = 2e-21
Identities = 60/163 (36%), Positives = 91/163 (55%), Gaps = 12/163 (7%)
Frame = +1
Query: 223 SPVPQNFVPRNYVVRNYARE--PRTRVATRSQPT---LRERLMAPAGPNAFXXXXXXXXX 387
SPV +N + +N + +RE +TR+ R T L+E + P+ F
Sbjct: 25 SPVVKNSITKNQWLLTPSREYATKTRIGIRRGRTGQELKEAALEPSMEKIFKIDQMGRWF 84
Query: 388 XXXXXXXXX---CYYGSGVKP--GTLQESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVA 552
CYYG G+ G ++++ +WPQYVK+RI +TY Y+AGS+ LTA SA+A
Sbjct: 85 VAGGAAVGLGALCYYGLGLSNEIGAIEKAVIWPQYVKDRIHSTYMYLAGSIGLTALSAIA 144
Query: 553 VFRTPALLNLVARNGWMSIIVTLGLMIGSGMVVRGMEY--TPG 675
+ RTP L+N + R W++I VT M+G+GM+VR + Y +PG
Sbjct: 145 ISRTPVLMNFMMRGSWVTIGVTFAAMVGAGMLVRSIPYDQSPG 187
>CR533519-1|CAG38550.1| 345|Homo sapiens GHITM protein.
Length = 345
Score = 99 bits (238), Expect = 7e-21
Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 12/163 (7%)
Frame = +1
Query: 223 SPVPQNFVPRNYVVRNYARE--PRTRVATRSQPT---LRERLMAPAGPNAFXXXXXXXXX 387
SPV +N + +N + +RE +TR+ R T L+E + P+ F
Sbjct: 25 SPVVKNSITKNQWLLTPSREYATKTRIGIRRGRTGQELKEAALEPSMEKMFKIDQMGRWF 84
Query: 388 XXXXXXXXX---CYYGSGVKP--GTLQESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVA 552
CYYG G+ G ++++ +WP+YVK+RI +TY Y+AGS+ LTA SA+A
Sbjct: 85 VAGGAAVGLGALCYYGLGLSNEIGAIEKAVIWPRYVKDRIHSTYMYLAGSIGLTALSAIA 144
Query: 553 VFRTPALLNLVARNGWMSIIVTLGLMIGSGMVVRGMEY--TPG 675
+ RTP L+N + R W++I VT M+G+GM+VR + Y +PG
Sbjct: 145 ISRTPVLMNFMMRGSWVTIGVTFAAMVGAGMLVRSIPYDQSPG 187
>AF060923-1|AAG43135.1| 345|Homo sapiens My021 protein protein.
Length = 345
Score = 98.7 bits (235), Expect = 2e-20
Identities = 45/91 (49%), Positives = 66/91 (72%), Gaps = 4/91 (4%)
Frame = +1
Query: 415 CYYGSGVKP--GTLQESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVAVFRTPALLNLVA 588
CYYG G+ G ++++ +WPQYVK+RI +TY Y+AGS+ LTA SA+A+ RTP L+N +
Sbjct: 97 CYYGLGLSNEIGAIEKAVIWPQYVKDRIHSTYMYLAGSIGLTALSAIAISRTPVLMNFMM 156
Query: 589 RNGWMSIIVTLGLMIGSGMVVRGMEY--TPG 675
R W++I VT M+G+GM+VR + Y +PG
Sbjct: 157 RGSWVTIGVTFAAMVGAGMLVRSIPYDQSPG 187
>AL603756-2|CAH72661.1| 325|Homo sapiens growth hormone inducible
transmembrane protein protein.
Length = 325
Score = 91.5 bits (217), Expect = 3e-18
Identities = 41/83 (49%), Positives = 61/83 (73%), Gaps = 2/83 (2%)
Frame = +1
Query: 433 VKPGTLQESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVAVFRTPALLNLVARNGWMSII 612
V G ++++ +WPQYVK+RI +TY Y+AGS+ LTA SA+A+ RTP L+N + R W++I
Sbjct: 85 VAGGAIEKAVIWPQYVKDRIHSTYMYLAGSIGLTALSAIAISRTPVLMNFMMRGSWVTIG 144
Query: 613 VTLGLMIGSGMVVRGMEY--TPG 675
VT M+G+GM+VR + Y +PG
Sbjct: 145 VTFAAMVGAGMLVRSIPYDQSPG 167
>BC071696-1|AAH71696.1| 498|Homo sapiens FLJ10404 protein protein.
Length = 498
Score = 34.3 bits (75), Expect = 0.42
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 561 SENSNCTTSSQHQRTRDVSICCFYTFF 481
SE S+CT+SS HQR CC+ FF
Sbjct: 71 SERSSCTSSSTHQRDGKFCDCCYCEFF 97
>AY330211-1|AAP92113.1| 605|Homo sapiens netrin 4 protein.
Length = 605
Score = 29.9 bits (64), Expect = 9.0
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 405 SCSVLLWLWGKTRYSSGISPLATICERTYKN-NIWIHRGFFGADCW*CSCCFQN 563
SC+ LL LWG T ++G+S +A + R K N + G W + C QN
Sbjct: 3 SCARLLLLWGCTVVAAGLSGVAGVSSRCEKACNPRMGNLALGRKLWADTTCGQN 56
>AF297711-1|AAG53651.1| 628|Homo sapiens netrin 4 precursor
protein.
Length = 628
Score = 29.9 bits (64), Expect = 9.0
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 405 SCSVLLWLWGKTRYSSGISPLATICERTYKN-NIWIHRGFFGADCW*CSCCFQN 563
SC+ LL LWG T ++G+S +A + R K N + G W + C QN
Sbjct: 3 SCARLLLLWGCTVVAAGLSGVAGVSSRCEKACNPRMGNLALGRKLWADTTCGQN 56
>AF278532-1|AAG30822.1| 628|Homo sapiens beta-netrin protein.
Length = 628
Score = 29.9 bits (64), Expect = 9.0
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 405 SCSVLLWLWGKTRYSSGISPLATICERTYKN-NIWIHRGFFGADCW*CSCCFQN 563
SC+ LL LWG T ++G+S +A + R K N + G W + C QN
Sbjct: 3 SCARLLLLWGCTVVAAGLSGVAGVSSRCEKACNPRMGNLALGRKLWADTTCGQN 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,711,388
Number of Sequences: 237096
Number of extensions: 2336674
Number of successful extensions: 5347
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5345
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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