Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc20l01
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    23   2.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.1  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   9.4  

>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 422 YCMLIALNIFIYFIFKFSNSTG 357
           YC+ + + +  +  FKFS+S G
Sbjct: 65  YCLFLEMTLAHHCRFKFSSSVG 86


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 623 LIVTLPSMYHMKIIW 667
           LI T+  MYH+ I+W
Sbjct: 244 LIWTIYEMYHLAILW 258



 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 120 SLWLCKRTLIFIIFM*VIINEIKFFSSNCSV 28
           SL L    ++F      ++N   FFS  CS+
Sbjct: 325 SLQLINHRVVFTAMGLYVLNMEHFFSVKCSI 355


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 422 YCMLIALNIFIYFIFKF 372
           YC+LI L    YF + F
Sbjct: 229 YCVLIILLCIYYFYYAF 245


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -1

Query: 331 IIEYTSVSTLISFYVHY*IYFDIFITNVNS 242
           I  +T + T+        +YFDIFIT   S
Sbjct: 210 IFGWTILQTVFFTVPRVLMYFDIFITEHES 239


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,451
Number of Sequences: 336
Number of extensions: 2943
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)