Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20k22
(670 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003209-1|AAO24964.1| 447|Drosophila melanogaster SD23896p pro... 68 1e-11
AE014297-4448|AAF56946.1| 447|Drosophila melanogaster CG18112-P... 68 1e-11
AY129297-1|AAM97765.1| 802|Drosophila melanogaster anaphase-pro... 28 10.0
AY061610-1|AAL29158.1| 628|Drosophila melanogaster SD07532p pro... 28 10.0
AY058717-1|AAL13946.1| 449|Drosophila melanogaster LD45730p pro... 28 10.0
AJ580980-1|CAE45726.1| 630|Drosophila melanogaster PNUTSDm prot... 28 10.0
AJ580979-1|CAE45725.1| 1135|Drosophila melanogaster PNUTSDm prot... 28 10.0
AE014134-178|AAN10490.1| 593|Drosophila melanogaster CG33526-PC... 28 10.0
AE014134-177|AAF51438.2| 628|Drosophila melanogaster CG33526-PB... 28 10.0
AE014134-176|AAF51439.2| 628|Drosophila melanogaster CG33526-PA... 28 10.0
AE014134-175|AAN10491.2| 1135|Drosophila melanogaster CG33526-PD... 28 10.0
AE013599-3760|AAF47123.1| 802|Drosophila melanogaster CG3060-PA... 28 10.0
>BT003209-1|AAO24964.1| 447|Drosophila melanogaster SD23896p
protein.
Length = 447
Score = 68.1 bits (159), Expect = 1e-11
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 16/201 (7%)
Frame = +1
Query: 112 LNMDDDDYWNTSDTKAKAFSFDDDVLSPQEILAIGQKTYPGQKEEXXXXXXXXXTVKVAQ 291
L +D + YWN S A FSFDD+ E+ G +
Sbjct: 3 LQLDSESYWNRSSRAA--FSFDDE----DEVDLAPDLVSNGILADDTISEASFNNSVALN 56
Query: 292 IPLMSLVTPKVLDLILLAQS--------GKDPAQE--------QSQESPETVAVTLKRLV 423
+ + S+++ + L L+L Q+ G P +E QS + T ++L+
Sbjct: 57 LSIKSILSEEALKLVLQEQALDDRVLPKGVSPEEELKLLRRQLQSTLYSPNLEATAQKLL 116
Query: 424 LGRRCALHVHRTMKSKTELLDGAVAIGDGNAILTVVLFLIATLNKKLVYELLSSRLIALN 603
G+ L + +++ K +LLD +A G G+A++TV+LFL TLN + +L R AL
Sbjct: 117 QGKTAPLEMFKSLHEKQQLLDTLMAQGGGHAVITVLLFLKRTLNTTQFHGILRERPKALE 176
Query: 604 HYISFLQNEGKITELTDLLTM 666
Y+S+L+ G + +LL +
Sbjct: 177 QYLSYLKESGDLAGHIELLQL 197
>AE014297-4448|AAF56946.1| 447|Drosophila melanogaster CG18112-PA
protein.
Length = 447
Score = 68.1 bits (159), Expect = 1e-11
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 16/201 (7%)
Frame = +1
Query: 112 LNMDDDDYWNTSDTKAKAFSFDDDVLSPQEILAIGQKTYPGQKEEXXXXXXXXXTVKVAQ 291
L +D + YWN S A FSFDD+ E+ G +
Sbjct: 3 LQLDSESYWNRSSRAA--FSFDDE----DEVDLAPDLVSNGILADDTISEASFNNSVALN 56
Query: 292 IPLMSLVTPKVLDLILLAQS--------GKDPAQE--------QSQESPETVAVTLKRLV 423
+ + S+++ + L L+L Q+ G P +E QS + T ++L+
Sbjct: 57 LSIKSILSEEALKLVLQEQALDDRVLPKGVSPEEELKLLRRQLQSTLYSPNLEATAQKLL 116
Query: 424 LGRRCALHVHRTMKSKTELLDGAVAIGDGNAILTVVLFLIATLNKKLVYELLSSRLIALN 603
G+ L + +++ K +LLD +A G G+A++TV+LFL TLN + +L R AL
Sbjct: 117 QGKTAPLEMFKSLHEKQQLLDTLMAQGGGHAVITVLLFLKRTLNTTQFHGILRERPKALE 176
Query: 604 HYISFLQNEGKITELTDLLTM 666
Y+S+L+ G + +LL +
Sbjct: 177 QYLSYLKESGDLAGHIELLQL 197
>AY129297-1|AAM97765.1| 802|Drosophila melanogaster
anaphase-promoting complex subunit2 protein.
Length = 802
Score = 28.3 bits (60), Expect = 10.0
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = +1
Query: 517 ILTVVLFLIATLNKKLVYELLSSRLI---ALNHYISFLQNEGKITELT-DLLTML 669
IL V+++ T N+ + +L S + AL +SF QN G I+E T + T+L
Sbjct: 644 ILAVIIYHFQTKNEWTIEDLSSITKVPASALRRRLSFWQNHGLISETTPGIFTLL 698
>AY061610-1|AAL29158.1| 628|Drosophila melanogaster SD07532p
protein.
Length = 628
Score = 28.3 bits (60), Expect = 10.0
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +1
Query: 412 KRLVLGRRCALHVHRTMKSKTELLDGAVAIGDGNAILTVVLFLIATLNKKLVYELLSSRL 591
K+LV +C ++V +KTELL +A+G + + T + I +N LV E+L L
Sbjct: 41 KKLV--SKC-VYVQILKSTKTELLGDFMAVGGWSLVYTWLNDAIRAMNWPLVQEILELLL 97
Query: 592 IA 597
++
Sbjct: 98 LS 99
>AY058717-1|AAL13946.1| 449|Drosophila melanogaster LD45730p
protein.
Length = 449
Score = 28.3 bits (60), Expect = 10.0
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = +1
Query: 517 ILTVVLFLIATLNKKLVYELLSSRLI---ALNHYISFLQNEGKITELT-DLLTML 669
IL V+++ T N+ + +L S + AL +SF QN G I+E T + T+L
Sbjct: 291 ILAVIIYHFQTKNEWTIEDLSSITKVPASALRRRLSFWQNHGLISETTPGIFTLL 345
>AJ580980-1|CAE45726.1| 630|Drosophila melanogaster PNUTSDm protein
protein.
Length = 630
Score = 28.3 bits (60), Expect = 10.0
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +1
Query: 412 KRLVLGRRCALHVHRTMKSKTELLDGAVAIGDGNAILTVVLFLIATLNKKLVYELLSSRL 591
K+LV +C ++V +KTELL +A+G + + T + I +N LV E+L L
Sbjct: 41 KKLV--SKC-VYVQILKSTKTELLGDFMAVGGWSLVYTWLNDAIRAMNWPLVQEILELLL 97
Query: 592 IA 597
++
Sbjct: 98 LS 99
>AJ580979-1|CAE45725.1| 1135|Drosophila melanogaster PNUTSDm protein
protein.
Length = 1135
Score = 28.3 bits (60), Expect = 10.0
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +1
Query: 412 KRLVLGRRCALHVHRTMKSKTELLDGAVAIGDGNAILTVVLFLIATLNKKLVYELLSSRL 591
K+LV +C ++V +KTELL +A+G + + T + I +N LV E+L L
Sbjct: 41 KKLV--SKC-VYVQILKSTKTELLGDFMAVGGWSLVYTWLNDAIRAMNWPLVQEILELLL 97
Query: 592 IA 597
++
Sbjct: 98 LS 99
>AE014134-178|AAN10490.1| 593|Drosophila melanogaster CG33526-PC,
isoform C protein.
Length = 593
Score = 28.3 bits (60), Expect = 10.0
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +1
Query: 412 KRLVLGRRCALHVHRTMKSKTELLDGAVAIGDGNAILTVVLFLIATLNKKLVYELLSSRL 591
K+LV +C ++V +KTELL +A+G + + T + I +N LV E+L L
Sbjct: 6 KKLV--SKC-VYVQILKSTKTELLGDFMAVGGWSLVYTWLNDAIRAMNWPLVQEILELLL 62
Query: 592 IA 597
++
Sbjct: 63 LS 64
>AE014134-177|AAF51438.2| 628|Drosophila melanogaster CG33526-PB,
isoform B protein.
Length = 628
Score = 28.3 bits (60), Expect = 10.0
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +1
Query: 412 KRLVLGRRCALHVHRTMKSKTELLDGAVAIGDGNAILTVVLFLIATLNKKLVYELLSSRL 591
K+LV +C ++V +KTELL +A+G + + T + I +N LV E+L L
Sbjct: 41 KKLV--SKC-VYVQILKSTKTELLGDFMAVGGWSLVYTWLNDAIRAMNWPLVQEILELLL 97
Query: 592 IA 597
++
Sbjct: 98 LS 99
>AE014134-176|AAF51439.2| 628|Drosophila melanogaster CG33526-PA,
isoform A protein.
Length = 628
Score = 28.3 bits (60), Expect = 10.0
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +1
Query: 412 KRLVLGRRCALHVHRTMKSKTELLDGAVAIGDGNAILTVVLFLIATLNKKLVYELLSSRL 591
K+LV +C ++V +KTELL +A+G + + T + I +N LV E+L L
Sbjct: 41 KKLV--SKC-VYVQILKSTKTELLGDFMAVGGWSLVYTWLNDAIRAMNWPLVQEILELLL 97
Query: 592 IA 597
++
Sbjct: 98 LS 99
>AE014134-175|AAN10491.2| 1135|Drosophila melanogaster CG33526-PD,
isoform D protein.
Length = 1135
Score = 28.3 bits (60), Expect = 10.0
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +1
Query: 412 KRLVLGRRCALHVHRTMKSKTELLDGAVAIGDGNAILTVVLFLIATLNKKLVYELLSSRL 591
K+LV +C ++V +KTELL +A+G + + T + I +N LV E+L L
Sbjct: 41 KKLV--SKC-VYVQILKSTKTELLGDFMAVGGWSLVYTWLNDAIRAMNWPLVQEILELLL 97
Query: 592 IA 597
++
Sbjct: 98 LS 99
>AE013599-3760|AAF47123.1| 802|Drosophila melanogaster CG3060-PA
protein.
Length = 802
Score = 28.3 bits (60), Expect = 10.0
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = +1
Query: 517 ILTVVLFLIATLNKKLVYELLSSRLI---ALNHYISFLQNEGKITELT-DLLTML 669
IL V+++ T N+ + +L S + AL +SF QN G I+E T + T+L
Sbjct: 644 ILAVIIYHFQTKNEWTIEDLSSITKVPASALRRRLSFWQNHGLISETTPGIFTLL 698
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,129,881
Number of Sequences: 53049
Number of extensions: 524326
Number of successful extensions: 1467
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1467
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -