Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc20k21
(480 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical p... 54 7e-08
AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical... 52 3e-07
Z82059-11|CAC42351.2| 591|Caenorhabditis elegans Hypothetical p... 50 1e-06
DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein. 47 6e-06
AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical ... 47 6e-06
Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical pr... 44 6e-05
Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical pr... 44 6e-05
U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein. 44 6e-05
AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein. 44 6e-05
U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical pr... 42 2e-04
U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical pr... 42 2e-04
AL032663-3|CAA21761.1| 320|Caenorhabditis elegans Hypothetical ... 42 2e-04
AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein. 42 2e-04
AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein. 42 2e-04
AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1 suppres... 42 2e-04
Z77660-9|CAB01179.1| 602|Caenorhabditis elegans Hypothetical pr... 41 4e-04
L14433-2|AAA27978.1| 410|Caenorhabditis elegans Hypothetical pr... 36 0.015
Z68216-4|CAA92463.2| 565|Caenorhabditis elegans Hypothetical pr... 32 0.25
U80839-11|AAB37912.2| 261|Caenorhabditis elegans Hypothetical p... 31 0.57
Z66512-2|CAA91323.1| 387|Caenorhabditis elegans Hypothetical pr... 30 1.00
U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical pr... 30 1.00
AC025723-13|AAK29939.1| 286|Caenorhabditis elegans Hypothetical... 29 1.7
AL132865-13|CAB60609.1| 496|Caenorhabditis elegans Hypothetical... 28 3.1
U80842-9|AAB37945.2| 258|Caenorhabditis elegans Hypothetical pr... 27 7.0
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ... 27 7.0
Z78062-3|CAB01496.1| 1232|Caenorhabditis elegans Hypothetical pr... 27 9.3
U23454-6|AAC46521.1| 192|Caenorhabditis elegans Hypothetical pr... 27 9.3
>Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical
protein T27E9.4a protein.
Length = 589
Score = 53.6 bits (123), Expect = 7e-08
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Frame = +3
Query: 219 FHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPI--VFLKDVSHS 392
F+ L S+ L DV L E R L AHK++L+ PYF+ MF ++ + + + ++D+++
Sbjct: 41 FNELRSKCQLCDVALLVENRKLSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDMNYE 100
Query: 393 ALRDLLQFMYQGEVNVKQEELASFIXTA 476
+ LL F Y GE+ + + S + A
Sbjct: 101 TVDALLSFAYTGELRITTSNVQSIMLGA 128
>AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical
protein R12E2.1 protein.
Length = 531
Score = 51.6 bits (118), Expect = 3e-07
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +3
Query: 225 GLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSAL 398
GL +R L DVTL + + AH++VLS CSPYF MF +M + ++++ L
Sbjct: 48 GLKNRDVLCDVTLICGWKRINAHRVVLSACSPYFLSMFTSQMAECYMREINMEEIEPPTL 107
Query: 399 RDLLQFMYQGEVNVKQEELASFIXTA 476
L++F Y G + + + + A
Sbjct: 108 EALIEFCYTGAIAIDDSNVQDILPAA 133
>Z82059-11|CAC42351.2| 591|Caenorhabditis elegans Hypothetical
protein T27E9.4b protein.
Length = 591
Score = 49.6 bits (113), Expect = 1e-06
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Frame = +3
Query: 219 FHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPIVFL----KDVS 386
F+ L S+ L DV L E R L AHK++L+ PYF+ MF ++ + + + D++
Sbjct: 41 FNELRSKCQLCDVALLVENRKLSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDSDMN 100
Query: 387 HSALRDLLQFMYQGEVNVKQEELASFIXTA 476
+ + LL F Y GE+ + + S + A
Sbjct: 101 YETVDALLSFAYTGELRITTSNVQSIMLGA 130
>DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein.
Length = 690
Score = 47.2 bits (107), Expect = 6e-06
Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +3
Query: 243 DLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQF 416
+L DV L G +++AH+ +L+ SPYF+ MF M + + L+D+ ++R ++ +
Sbjct: 109 ELCDVELLVAGSVIRAHRYILAAASPYFKAMFTNGMVEMKKLTIELQDIPEESVRIIVDY 168
Query: 417 MYQGEVNVKQEELASFIXTA 476
+Y ++ + + I TA
Sbjct: 169 IYTDKIAITMNNVHQLIFTA 188
>AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical
protein W02G9.2 protein.
Length = 690
Score = 47.2 bits (107), Expect = 6e-06
Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +3
Query: 243 DLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQF 416
+L DV L G +++AH+ +L+ SPYF+ MF M + + L+D+ ++R ++ +
Sbjct: 109 ELCDVELLVAGSVIRAHRYILAAASPYFKAMFTNGMVEMKKLTIELQDIPEESVRIIVDY 168
Query: 417 MYQGEVNVKQEELASFIXTA 476
+Y ++ + + I TA
Sbjct: 169 IYTDKIAITMNNVHQLIFTA 188
>Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical
protein ZK858.4 protein.
Length = 395
Score = 44.0 bits (99), Expect = 6e-05
Identities = 25/114 (21%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Frame = +3
Query: 144 VVAIMASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPY 323
V I ++E N + + L S+ L D + G++++AHK VL+ SP
Sbjct: 166 VETITTTNEPIQFEPTNSEQQLIEDYQRLFSQELLCDFAINVNGKIIRAHKAVLAARSPV 225
Query: 324 FQEMFKMNPT---QHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFIXTA 476
F M T + ++++ D+ + + +++ ++Y G N ++A+ + A
Sbjct: 226 FNAMLTHQDTDEAKSSMMYINDMDYDVIYEMVYYIYCGRCNKDITDMATALLIA 279
>Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical
protein C47D12.7 protein.
Length = 618
Score = 44.0 bits (99), Expect = 6e-05
Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Frame = +3
Query: 282 LQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 455
+ AH+++LS S YF+ MF + + I+ +K+V L L+ +MY G + + ++ +
Sbjct: 82 IHAHRVILSASSSYFRAMFTGGLRESTQRIIPIKEVDVEVLSQLIDYMYTGRMRIDEQNV 141
Query: 456 ASFIXTA 476
+ + TA
Sbjct: 142 QTILATA 148
>U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein.
Length = 395
Score = 44.0 bits (99), Expect = 6e-05
Identities = 25/114 (21%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Frame = +3
Query: 144 VVAIMASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPY 323
V I ++E N + + L S+ L D + G++++AHK VL+ SP
Sbjct: 166 VETITTTNEPIQFEPTNSEQQLIEDYQRLFSQELLCDFAINVNGKIIRAHKAVLAARSPV 225
Query: 324 FQEMFKMNPT---QHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFIXTA 476
F M T + ++++ D+ + + +++ ++Y G N ++A+ + A
Sbjct: 226 FNAMLTHQDTDEAKSSMMYINDMDYDVIYEMVYYIYCGRCNKDITDMATALLIA 279
>AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein.
Length = 618
Score = 44.0 bits (99), Expect = 6e-05
Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Frame = +3
Query: 282 LQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 455
+ AH+++LS S YF+ MF + + I+ +K+V L L+ +MY G + + ++ +
Sbjct: 82 IHAHRVILSASSSYFRAMFTGGLRESTQRIIPIKEVDVEVLSQLIDYMYTGRMRIDEQNV 141
Query: 456 ASFIXTA 476
+ + TA
Sbjct: 142 QTILATA 148
>U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical
protein C07D10.2a protein.
Length = 390
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +3
Query: 201 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMN--PTQHPIVFL 374
++++ L G D TL E R L+AHK +L+ SP F M + + Q+ L
Sbjct: 187 SDVTKDLENLYRSGKHADFTLVVEERELKAHKAILAARSPVFAAMMEPHTAEAQNSRAIL 246
Query: 375 KDVSHSALRDLLQFMYQG 428
+D+ + ++ +L ++Y G
Sbjct: 247 RDIDYEVVQAILYYIYTG 264
>U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical
protein C07D10.2b protein.
Length = 397
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +3
Query: 201 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMN--PTQHPIVFL 374
++++ L G D TL E R L+AHK +L+ SP F M + + Q+ L
Sbjct: 194 SDVTKDLENLYRSGKHADFTLVVEERELKAHKAILAARSPVFAAMMEPHTAEAQNSRAIL 253
Query: 375 KDVSHSALRDLLQFMYQG 428
+D+ + ++ +L ++Y G
Sbjct: 254 RDIDYEVVQAILYYIYTG 271
>AL032663-3|CAA21761.1| 320|Caenorhabditis elegans Hypothetical
protein Y75B12B.4 protein.
Length = 320
Score = 42.3 bits (95), Expect = 2e-04
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +3
Query: 246 LVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLK--DVSHSALRDLLQFM 419
L DV L EG+ + K VL+ S +FQ+MF N + +K DV+HS DLL +
Sbjct: 159 LTDVVLVLEGKHVHVGKQVLATSSQFFQKMFYSNFAEKTQAEIKIDDVTHSEFIDLLNVI 218
Query: 420 YQGEVNVKQEELASFIXTAE 479
Y + + ++ + ++
Sbjct: 219 YPTHMLINSSNVSHLLKLSD 238
>AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 42.3 bits (95), Expect = 2e-04
Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 7/117 (5%)
Frame = +3
Query: 147 VAIMASDEQFSLCWNNFHANMSAGFHGLLSR-------GDLVDVTLAAEGRLLQAHKLVL 305
+ ++AS E LC F + H L R G DV + + + AH+ +L
Sbjct: 1 MTLVASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNIL 60
Query: 306 SVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFIXTA 476
+ SPYF +FK + + S L +MY G V + + ++ + A
Sbjct: 61 AAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSELLRFA 117
>AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 42.3 bits (95), Expect = 2e-04
Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 7/117 (5%)
Frame = +3
Query: 147 VAIMASDEQFSLCWNNFHANMSAGFHGLLSR-------GDLVDVTLAAEGRLLQAHKLVL 305
+ ++AS E LC F + H L R G DV + + + AH+ +L
Sbjct: 1 MTLVASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNIL 60
Query: 306 SVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFIXTA 476
+ SPYF +FK + + S L +MY G V + + ++ + A
Sbjct: 61 AAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSELLRFA 117
>AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1
suppressor/dio uptake defective/raf enhancer protein 1
protein.
Length = 909
Score = 42.3 bits (95), Expect = 2e-04
Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 7/117 (5%)
Frame = +3
Query: 147 VAIMASDEQFSLCWNNFHANMSAGFHGLLSR-------GDLVDVTLAAEGRLLQAHKLVL 305
+ ++AS E LC F + H L R G DV + + + AH+ +L
Sbjct: 1 MTLVASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNIL 60
Query: 306 SVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFIXTA 476
+ SPYF +FK + + S L +MY G V + + ++ + A
Sbjct: 61 AAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSELLRFA 117
>Z77660-9|CAB01179.1| 602|Caenorhabditis elegans Hypothetical
protein F38H4.7 protein.
Length = 602
Score = 41.1 bits (92), Expect = 4e-04
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Frame = +3
Query: 282 LQAHKLVLSVCSPYFQEMFK--MNP--TQHPI-VFLKDVSHSALRDLLQFMYQGEVNVKQ 446
+ AHK VLS+ S F MF + P T+ + + L DV SA LL+F+Y EV ++
Sbjct: 204 IPAHKFVLSIGSVVFDAMFNGGLTPKNTEEALEIELPDVEPSAFLALLKFLYSDEVKIEA 263
Query: 447 EELASFIXTAE 479
E + + + TA+
Sbjct: 264 ESVMTTLYTAK 274
>L14433-2|AAA27978.1| 410|Caenorhabditis elegans Hypothetical
protein C50C3.8 protein.
Length = 410
Score = 35.9 bits (79), Expect = 0.015
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +3
Query: 252 DVTLAAEGRLLQAHKLVLSVCSPYFQEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMY 422
D + + ++AH+ +L SP F+ MF M Q + ++D + ++R +++FMY
Sbjct: 220 DCVIHVGNKHIKAHRCILGQNSPVFKSMFSSPNMIEAQKGEIHIEDAKYDSVRAMVEFMY 279
Query: 423 QG 428
G
Sbjct: 280 TG 281
>Z68216-4|CAA92463.2| 565|Caenorhabditis elegans Hypothetical
protein F27C8.5 protein.
Length = 565
Score = 31.9 bits (69), Expect = 0.25
Identities = 16/75 (21%), Positives = 32/75 (42%)
Frame = +3
Query: 252 DVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGE 431
DV + + H +V+ S F E F + + D ++R + +MY GE
Sbjct: 36 DVKIQLKTGFDMVHSVVICAHSDVFSETFDNQRAPYQPFNMTDFDPDSVRRVFDWMYSGE 95
Query: 432 VNVKQEELASFIXTA 476
+++ + +A + A
Sbjct: 96 IDIPETTIADVLAVA 110
>U80839-11|AAB37912.2| 261|Caenorhabditis elegans Hypothetical
protein ZC204.3 protein.
Length = 261
Score = 30.7 bits (66), Expect = 0.57
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 213 AGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFK 341
A + + S + D L E + L +K LS+ S YF E+FK
Sbjct: 98 AEYEKMFSESEDTDAVLVVEDKRLHVNKEFLSLHSTYFAELFK 140
>Z66512-2|CAA91323.1| 387|Caenorhabditis elegans Hypothetical
protein F52H3.3 protein.
Length = 387
Score = 29.9 bits (64), Expect = 1.00
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +3
Query: 243 DLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMN--PTQHPIVFLKDVSHSALRDLLQF 416
++ D+TL + L +K L++ SP F MF N + V L+DV R+LL
Sbjct: 226 NICDMTLVINKQKLFVNKAYLALYSPVFYAMFFSNFQEREKTQVELEDVVLEEFRELLHV 285
Query: 417 MY 422
+Y
Sbjct: 286 IY 287
>U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical
protein C15H9.2 protein.
Length = 265
Score = 29.9 bits (64), Expect = 1.00
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Frame = +3
Query: 243 DLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMF-----KMNPTQHPIVFLKDVSHSALRDL 407
D +V L E H VLS+ S YF+ +F + + PI LK +S + R+L
Sbjct: 123 DSSNVVLKVEDEEFHVHTFVLSMASQYFKVLFNGSFIESSDLTKPIE-LKGISSCSFRNL 181
Query: 408 LQFMY 422
L +Y
Sbjct: 182 LNCIY 186
>AC025723-13|AAK29939.1| 286|Caenorhabditis elegans Hypothetical
protein Y54F10AM.11 protein.
Length = 286
Score = 29.1 bits (62), Expect = 1.7
Identities = 21/85 (24%), Positives = 35/85 (41%)
Frame = +3
Query: 213 AGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHS 392
AG + + + D + E R K L+ S FQ +F P P + ++DVS
Sbjct: 2 AGMDFSMPKELVFDAIVVVEERKFHVGKQYLATHSRVFQSLFA-TPGD-PEITIQDVSSE 59
Query: 393 ALRDLLQFMYQGEVNVKQEELASFI 467
L+FMY + + + S +
Sbjct: 60 DFLKFLEFMYHNTDQITAQNVESLL 84
>AL132865-13|CAB60609.1| 496|Caenorhabditis elegans Hypothetical
protein Y62E10A.16 protein.
Length = 496
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 219 FHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMF 338
+ L +G+ D+ LAA GR + HKL L + +F+ MF
Sbjct: 60 YQKLFLQGENSDIVLAACGREWRVHKLYLKQ-TKFFESMF 98
>U80842-9|AAB37945.2| 258|Caenorhabditis elegans Hypothetical
protein ZC239.6 protein.
Length = 258
Score = 27.1 bits (57), Expect = 7.0
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +3
Query: 273 GRLLQAHKLVLSVCSPYFQ---EMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVK 443
G+ K L+ YF+ E+ ++NPT PI + H +L FM G+V++
Sbjct: 8 GKEFVTSKATLTKFDGYFKNLPEIQQVNPTS-PIFVDRSPKH--FETILNFMRDGDVDLP 64
Query: 444 QEELASFIXTA 476
QE L + A
Sbjct: 65 QEYLNQLLREA 75
>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
protein Y38C9A.1 protein.
Length = 1484
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -3
Query: 250 TRSPRDSRP*KPADIFAWKLFQHSENCSSDAM 155
TRSP+ +P KP ++ FQ+S + SS A+
Sbjct: 1362 TRSPQVQKPIKPTASRSFTSFQNSPSTSSSAL 1393
>Z78062-3|CAB01496.1| 1232|Caenorhabditis elegans Hypothetical
protein F16D3.4 protein.
Length = 1232
Score = 26.6 bits (56), Expect = 9.3
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -1
Query: 372 KILSDV--VLDSF*TFLENRENILIELIYVLAITCLRQPTLRLRDLHATAGHESL 214
K+LS + +LDS T EN++ +L +LI +LAI L+ R+ H HE L
Sbjct: 293 KVLSFLSRLLDSIKTHHENKKLLLADLILLLAI--LKHVDRRVLTGHIGTIHEQL 345
>U23454-6|AAC46521.1| 192|Caenorhabditis elegans Hypothetical
protein C10A4.7 protein.
Length = 192
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 180 LCWNNFHANMSAGFHGLLSRGDLVDVTL 263
LCW + +AN++A F LL+ G + T+
Sbjct: 129 LCWEDENANVAAAFILLLASGTITFFTM 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,940,462
Number of Sequences: 27780
Number of extensions: 225023
Number of successful extensions: 477
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 473
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -